RNA–Protein interactions for RNA: ENST00000638251.1

RTTN-211, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-211ENST00000638251 STAC3Q96MF2 364 aa9.54□□□□□ -0.88
RTTN-211ENST00000638251 HSPA5P11021 654 aaKnown RBP9.54□□□□□ -0.88
RTTN-211ENST00000638251 NEO1Q92859 1461 aa9.54□□□□□ -0.88
RTTN-211ENST00000638251 ABCC1P33527 1531 aa9.53□□□□□ -0.88
RTTN-211ENST00000638251 ROCK2O75116 1388 aaKnown RBP9.53□□□□□ -0.88
RTTN-211ENST00000638251 SLC24A1O60721 1099 aa9.53□□□□□ -0.88
RTTN-211ENST00000638251 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
RTTN-211ENST00000638251 ATP7AQ04656 1500 aa9.51□□□□□ -0.89
RTTN-211ENST00000638251 HDGFP51858 240 aaKnown RBP9.51□□□□□ -0.89
RTTN-211ENST00000638251 ABCA9Q8IUA7 1624 aa9.5□□□□□ -0.89
RTTN-211ENST00000638251 CROCC2H7BZ55 1655 aa9.5□□□□□ -0.89
RTTN-211ENST00000638251 MAST1Q9Y2H9 1570 aa9.5□□□□□ -0.89
RTTN-211ENST00000638251 RPRD2Q5VT52 1461 aaKnown RBP9.5□□□□□ -0.89
RTTN-211ENST00000638251 CNGB1Q14028 1251 aaPredicted RBP9.5□□□□□ -0.89
RTTN-211ENST00000638251 A2MP01023 1474 aa9.5□□□□□ -0.89
RTTN-211ENST00000638251 FAM135AQ9P2D6 1515 aa9.49□□□□□ -0.89
RTTN-211ENST00000638251 CDC42BPBQ9Y5S2 1711 aa9.49□□□□□ -0.89
RTTN-211ENST00000638251 MIER1Q8N108 512 aa9.49□□□□□ -0.89
RTTN-211ENST00000638251 POGZQ7Z3K3 1410 aa9.49□□□□□ -0.89
RTTN-211ENST00000638251 PLPPR3Q6T4P5 718 aa9.49□□□□□ -0.89
RTTN-211ENST00000638251 RIMBP3CA6NJZ7 1639 aa9.49□□□□□ -0.89
RTTN-211ENST00000638251 RIMBP3BA6NNM3 1639 aa9.49□□□□□ -0.89
RTTN-211ENST00000638251 RIMBP3Q9UFD9 1639 aa9.49□□□□□ -0.89
RTTN-211ENST00000638251 PZPP20742 1482 aa9.48□□□□□ -0.89
RTTN-211ENST00000638251 EIF3AQ14152 1382 aaKnown RBP9.48□□□□□ -0.89
RTTN-211ENST00000638251 PLXNC1O60486 1568 aa9.47□□□□□ -0.89
RTTN-211ENST00000638251 TMF1P82094 1093 aa9.47□□□□□ -0.89
RTTN-211ENST00000638251 PPP6R1Q9UPN7 881 aa9.47□□□□□ -0.89
RTTN-211ENST00000638251 ARHGEF12Q9NZN5 1544 aa9.45□□□□□ -0.9
RTTN-211ENST00000638251 USP47Q96K76 1375 aa9.45□□□□□ -0.9
RTTN-211ENST00000638251 KDM6BO15054 1643 aa9.45□□□□□ -0.9
RTTN-211ENST00000638251 VGFO15240 615 aaPredicted RBP9.44□□□□□ -0.9
RTTN-211ENST00000638251 NEFLP07196 543 aa9.44□□□□□ -0.9
RTTN-211ENST00000638251 ZFYVE16Q7Z3T8 1539 aa9.43□□□□□ -0.9
RTTN-211ENST00000638251 KDM5DQ9BY66 1539 aa9.43□□□□□ -0.9
RTTN-211ENST00000638251 MLH3Q9UHC1 1453 aa9.43□□□□□ -0.9
RTTN-211ENST00000638251 SLC52A1Q9NWF4 448 aa9.43□□□□□ -0.9
RTTN-211ENST00000638251 RPGRIP1LQ68CZ1 1315 aa9.42□□□□□ -0.9
RTTN-211ENST00000638251 HECW2Q9P2P5 1572 aa9.41□□□□□ -0.9
RTTN-211ENST00000638251 NBPF8Q3BBV2 869 aa9.41□□□□□ -0.9
RTTN-211ENST00000638251 POGKQ9P215 609 aa9.4□□□□□ -0.9
RTTN-211ENST00000638251 ATP10AO60312 1499 aa9.4□□□□□ -0.9
RTTN-211ENST00000638251 GLI2P10070 1586 aa9.4□□□□□ -0.9
RTTN-211ENST00000638251 CCER2I3L3R5 266 aa9.4□□□□□ -0.91
RTTN-211ENST00000638251 MAGI2Q86UL8 1455 aa9.39□□□□□ -0.91
RTTN-211ENST00000638251 ST20-MTHFSA0A0A6YYL1 179 aa9.39□□□□□ -0.91
RTTN-211ENST00000638251 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.39□□□□□ -0.91
RTTN-211ENST00000638251 KNSTRNQ9Y448 316 aa9.38□□□□□ -0.91
RTTN-211ENST00000638251 UNC13BO14795 1591 aa9.38□□□□□ -0.91
RTTN-211ENST00000638251 MRS2Q9HD23 443 aa9.38□□□□□ -0.91
RTTN-211ENST00000638251 EID1Q9Y6B2 187 aa9.38□□□□□ -0.91
RTTN-211ENST00000638251 TMC1Q8TDI8 760 aa9.37□□□□□ -0.91
RTTN-211ENST00000638251 CCDC7Q96M83 1385 aa9.37□□□□□ -0.91
RTTN-211ENST00000638251 IQGAP3Q86VI3 1631 aa9.37□□□□□ -0.91
RTTN-211ENST00000638251 SENP3Q9H4L4 574 aaPredicted RBP9.36□□□□□ -0.91
RTTN-211ENST00000638251 EIF2AK4Q9P2K8 1649 aaKnown RBP9.36□□□□□ -0.91
RTTN-211ENST00000638251 CNTLNQ9NXG0 1405 aa9.36□□□□□ -0.91
RTTN-211ENST00000638251 INO80Q9ULG1 1556 aaPredicted RBP9.35□□□□□ -0.91
RTTN-211ENST00000638251 NUTM2DQ5VT03 806 aaPredicted RBP9.35□□□□□ -0.91
RTTN-211ENST00000638251 RALGAPBQ86X10 1494 aa9.35□□□□□ -0.91
RTTN-211ENST00000638251 STK26Q9P289 416 aa9.34□□□□□ -0.91
RTTN-211ENST00000638251 KIF7Q2M1P5 1343 aa9.34□□□□□ -0.91
RTTN-211ENST00000638251 FAM9BQ8IZU0 186 aa9.34□□□□□ -0.91
RTTN-211ENST00000638251 TSPOAP1O95153 1857 aa9.33□□□□□ -0.92
RTTN-211ENST00000638251 UHRF1BP1Q6BDS2 1440 aa9.33□□□□□ -0.92
RTTN-211ENST00000638251 YEATS2Q9ULM3 1422 aa9.33□□□□□ -0.92
RTTN-211ENST00000638251 KTN1Q86UP2 1357 aaKnown RBP9.33□□□□□ -0.92
RTTN-211ENST00000638251 RALBP1Q15311 655 aa9.33□□□□□ -0.92
RTTN-211ENST00000638251 WASHC2AQ641Q2 1341 aa9.33□□□□□ -0.92
RTTN-211ENST00000638251 DIP2BQ9P265 1576 aa9.33□□□□□ -0.92
RTTN-211ENST00000638251 TRAK1Q9UPV9 953 aa9.33□□□□□ -0.92
RTTN-211ENST00000638251 TET3O43151 1660 aa9.32□□□□□ -0.92
RTTN-211ENST00000638251 NBPF1Q3BBV0 1214 aa9.32□□□□□ -0.92
RTTN-211ENST00000638251 PRAG1Q86YV5 1406 aa9.32□□□□□ -0.92
RTTN-211ENST00000638251 HNRNPUQ00839 825 aaKnown RBP eCLIP9.32□□□□□ -0.92
RTTN-211ENST00000638251 CFAP70Q5T0N1 1121 aa9.32□□□□□ -0.92
RTTN-211ENST00000638251 TRPM2O94759 1503 aa9.31□□□□□ -0.92
RTTN-211ENST00000638251 KDM5CP41229 1560 aa9.31□□□□□ -0.92
RTTN-211ENST00000638251 SRPK2P78362 688 aaKnown RBP9.31□□□□□ -0.92
RTTN-211ENST00000638251 CENPJQ9HC77 1338 aaPredicted RBP9.31□□□□□ -0.92
RTTN-211ENST00000638251 ERICH6Q7L0X2 663 aa9.31□□□□□ -0.92
RTTN-211ENST00000638251 MAP3K4Q9Y6R4 1608 aa9.31□□□□□ -0.92
RTTN-211ENST00000638251 WDR43Q15061 677 aaKnown RBP eCLIP9.3□□□□□ -0.92
RTTN-211ENST00000638251 EVC2Q86UK5 1308 aa9.3□□□□□ -0.92
RTTN-211ENST00000638251 IDI1Q13907 227 aa9.3□□□□□ -0.92
RTTN-211ENST00000638251 PTPRTO14522 1441 aa9.3□□□□□ -0.92
RTTN-211ENST00000638251 PRDM15P57071 1507 aaPredicted RBP9.3□□□□□ -0.92
RTTN-211ENST00000638251 SAFB2Q14151 953 aaKnown RBP eCLIP9.29□□□□□ -0.92
RTTN-211ENST00000638251 NOS1P29475 1434 aa9.29□□□□□ -0.92
RTTN-211ENST00000638251 CC2D1BQ5T0F9 858 aaKnown RBP9.29□□□□□ -0.92
RTTN-211ENST00000638251 FBXO31Q5XUX0 539 aaPredicted RBP9.29□□□□□ -0.92
RTTN-211ENST00000638251 NEFMP07197 916 aa9.28□□□□□ -0.92
RTTN-211ENST00000638251 SCAF11Q99590 1463 aaKnown RBP9.28□□□□□ -0.92
RTTN-211ENST00000638251 EFCAB6Q5THR3 1501 aa9.28□□□□□ -0.92
RTTN-211ENST00000638251 NPATQ14207 1427 aa9.28□□□□□ -0.92
RTTN-211ENST00000638251 LMTK2Q8IWU2 1503 aa9.28□□□□□ -0.92
RTTN-211ENST00000638251 KIDINS220Q9ULH0 1771 aa9.28□□□□□ -0.92
RTTN-211ENST00000638251 HDGFL2Q7Z4V5 671 aaPredicted RBP9.28□□□□□ -0.92
RTTN-211ENST00000638251 ABCC3O15438 1527 aa9.27□□□□□ -0.92
RTTN-211ENST00000638251 TNRQ92752 1358 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms