RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 MIER1Q8N108 512 aa6.92□□□□□ -1.3
SCN8A-213ENST00000637540 SCAPERQ9BY12 1400 aa6.92□□□□□ -1.3
SCN8A-213ENST00000637540 ADGRL1O94910 1474 aa6.92□□□□□ -1.3
SCN8A-213ENST00000637540 RNF17Q9BXT8 1623 aaKnown RBP6.91□□□□□ -1.3
SCN8A-213ENST00000637540 TET3O43151 1660 aa6.91□□□□□ -1.3
SCN8A-213ENST00000637540 AFAP1Q8N556 730 aa6.91□□□□□ -1.3
SCN8A-213ENST00000637540 CD109Q6YHK3 1445 aa6.91□□□□□ -1.3
SCN8A-213ENST00000637540 MLH3Q9UHC1 1453 aa6.91□□□□□ -1.3
SCN8A-213ENST00000637540 PRDM15P57071 1507 aaPredicted RBP6.91□□□□□ -1.3
SCN8A-213ENST00000637540 FRMPD1Q5SYB0 1578 aa6.91□□□□□ -1.3
SCN8A-213ENST00000637540 SPHKAPQ2M3C7 1700 aa6.9□□□□□ -1.3
SCN8A-213ENST00000637540 NEO1Q92859 1461 aa6.9□□□□□ -1.31
SCN8A-213ENST00000637540 CEP152O94986 1710 aa6.9□□□□□ -1.31
SCN8A-213ENST00000637540 KIF13AQ9H1H9 1805 aa6.9□□□□□ -1.31
SCN8A-213ENST00000637540 SPAG9O60271 1321 aaKnown RBP6.89□□□□□ -1.31
SCN8A-213ENST00000637540 DHX29Q7Z478 1369 aaKnown RBP6.89□□□□□ -1.31
SCN8A-213ENST00000637540 PTPRTO14522 1441 aa6.89□□□□□ -1.31
SCN8A-213ENST00000637540 POGZQ7Z3K3 1410 aa6.89□□□□□ -1.31
SCN8A-213ENST00000637540 DIP2BQ9P265 1576 aa6.89□□□□□ -1.31
SCN8A-213ENST00000637540 TRPM1Q7Z4N2 1603 aa6.89□□□□□ -1.31
SCN8A-213ENST00000637540 ABCA6Q8N139 1617 aa6.89□□□□□ -1.31
SCN8A-213ENST00000637540 NEURL4Q96JN8 1562 aa6.88□□□□□ -1.31
SCN8A-213ENST00000637540 HECW2Q9P2P5 1572 aa6.88□□□□□ -1.31
SCN8A-213ENST00000637540 LMTK2Q8IWU2 1503 aa6.88□□□□□ -1.31
SCN8A-213ENST00000637540 ZNF518AQ6AHZ1 1483 aa6.88□□□□□ -1.31
SCN8A-213ENST00000637540 LAMC1P11047 1609 aa6.87□□□□□ -1.31
SCN8A-213ENST00000637540 RALGAPBQ86X10 1494 aa6.87□□□□□ -1.31
SCN8A-213ENST00000637540 NPM1P06748 294 aaKnown RBP eCLIP6.87□□□□□ -1.31
SCN8A-213ENST00000637540 IFT172Q9UG01 1749 aa6.87□□□□□ -1.31
SCN8A-213ENST00000637540 CLTCL1P53675 1640 aa6.87□□□□□ -1.31
SCN8A-213ENST00000637540 DIP2CQ9Y2E4 1556 aa6.86□□□□□ -1.31
SCN8A-213ENST00000637540 TRPM2O94759 1503 aa6.86□□□□□ -1.31
SCN8A-213ENST00000637540 A2MP01023 1474 aa6.86□□□□□ -1.31
SCN8A-213ENST00000637540 C11orf95C9JLR9 678 aaPredicted RBP6.86□□□□□ -1.31
SCN8A-213ENST00000637540 HSPA5P11021 654 aaKnown RBP6.86□□□□□ -1.31
SCN8A-213ENST00000637540 HIRIP3Q9BW71 556 aaPredicted RBP6.86□□□□□ -1.31
SCN8A-213ENST00000637540 ZMYM4Q5VZL5 1548 aa6.86□□□□□ -1.31
SCN8A-213ENST00000637540 CFAP65Q6ZU64 1925 aaKnown RBP6.86□□□□□ -1.31
SCN8A-213ENST00000637540 CYB5RLQ6IPT4 315 aa6.85□□□□□ -1.31
SCN8A-213ENST00000637540 EFCAB6Q5THR3 1501 aa6.85□□□□□ -1.31
SCN8A-213ENST00000637540 PRAG1Q86YV5 1406 aa6.84□□□□□ -1.31
SCN8A-213ENST00000637540 SIGLEC1Q9BZZ2 1709 aa6.84□□□□□ -1.31
SCN8A-213ENST00000637540 WASHC2AQ641Q2 1341 aa6.84□□□□□ -1.31
SCN8A-213ENST00000637540 TSPOAP1O95153 1857 aa6.84□□□□□ -1.31
SCN8A-213ENST00000637540 DDX10Q13206 875 aaKnown RBP6.84□□□□□ -1.31
SCN8A-213ENST00000637540 KIF1BO60333 1816 aa6.84□□□□□ -1.31
SCN8A-213ENST00000637540 GPRASP1Q5JY77 1395 aa6.83□□□□□ -1.32
SCN8A-213ENST00000637540 EIF4G2P78344 907 aaKnown RBP eCLIP6.83□□□□□ -1.32
SCN8A-213ENST00000637540 KIAA1210Q9ULL0 1709 aa6.83□□□□□ -1.32
SCN8A-213ENST00000637540 MROH2AA6NES4 1674 aa6.83□□□□□ -1.32
SCN8A-213ENST00000637540 CCDC144AA2RUR9 1427 aa6.83□□□□□ -1.32
SCN8A-213ENST00000637540 MADDQ8WXG6 1647 aa6.83□□□□□ -1.32
SCN8A-213ENST00000637540 CCDC7Q96M83 1385 aa6.82□□□□□ -1.32
SCN8A-213ENST00000637540 REREQ9P2R6 1566 aa6.82□□□□□ -1.32
SCN8A-213ENST00000637540 IQGAP1P46940 1657 aa6.82□□□□□ -1.32
SCN8A-213ENST00000637540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.82□□□□□ -1.32
SCN8A-213ENST00000637540 PIK3C2BO00750 1634 aa6.82□□□□□ -1.32
SCN8A-213ENST00000637540 CAMSAP1Q5T5Y3 1602 aa6.82□□□□□ -1.32
SCN8A-213ENST00000637540 ABCC3O15438 1527 aa6.81□□□□□ -1.32
SCN8A-213ENST00000637540 ZC3H13Q5T200 1668 aaKnown RBP6.81□□□□□ -1.32
SCN8A-213ENST00000637540 PPLO60437 1756 aa6.8□□□□□ -1.32
SCN8A-213ENST00000637540 KIF3BO15066 747 aa6.8□□□□□ -1.32
SCN8A-213ENST00000637540 RAPGEF3O95398 923 aa6.8□□□□□ -1.32
SCN8A-213ENST00000637540 YEATS2Q9ULM3 1422 aa6.8□□□□□ -1.32
SCN8A-213ENST00000637540 USP47Q96K76 1375 aa6.8□□□□□ -1.32
SCN8A-213ENST00000637540 COL17A1Q9UMD9 1497 aaPredicted RBP6.79□□□□□ -1.32
SCN8A-213ENST00000637540 SYNMO15061 1565 aa6.79□□□□□ -1.32
SCN8A-213ENST00000637540 UGGT1Q9NYU2 1555 aa6.79□□□□□ -1.32
SCN8A-213ENST00000637540 NOS1P29475 1434 aa6.79□□□□□ -1.32
SCN8A-213ENST00000637540 NPATQ14207 1427 aa6.79□□□□□ -1.32
SCN8A-213ENST00000637540 CNTLNQ9NXG0 1405 aa6.79□□□□□ -1.32
SCN8A-213ENST00000637540 ADGRB3O60242 1522 aa6.79□□□□□ -1.32
SCN8A-213ENST00000637540 NRXN1Q9ULB1 1477 aa6.79□□□□□ -1.32
SCN8A-213ENST00000637540 KIF7Q2M1P5 1343 aa6.78□□□□□ -1.32
SCN8A-213ENST00000637540 MYO5BQ9ULV0 1848 aa6.78□□□□□ -1.32
SCN8A-213ENST00000637540 ARHGAP31Q2M1Z3 1444 aa6.78□□□□□ -1.32
SCN8A-213ENST00000637540 AGLP35573 1532 aa6.78□□□□□ -1.32
SCN8A-213ENST00000637540 DCAF11Q8TEB1 546 aa6.78□□□□□ -1.32
SCN8A-213ENST00000637540 KANK1Q14678 1352 aa6.78□□□□□ -1.32
SCN8A-213ENST00000637540 PREX1Q8TCU6 1659 aa6.77□□□□□ -1.32
SCN8A-213ENST00000637540 ARID4BQ4LE39 1312 aaPredicted RBP6.77□□□□□ -1.32
SCN8A-213ENST00000637540 CCER2I3L3R5 266 aa6.77□□□□□ -1.33
SCN8A-213ENST00000637540 FAM69CQ0P6D2 419 aa6.77□□□□□ -1.33
SCN8A-213ENST00000637540 NBPF1Q3BBV0 1214 aa6.77□□□□□ -1.33
SCN8A-213ENST00000637540 STAC3Q96MF2 364 aa6.77□□□□□ -1.33
SCN8A-213ENST00000637540 MYOM2P54296 1465 aa6.77□□□□□ -1.33
SCN8A-213ENST00000637540 RGL3Q3MIN7 710 aa6.75□□□□□ -1.33
SCN8A-213ENST00000637540 TESK2Q96S53 571 aa6.75□□□□□ -1.33
SCN8A-213ENST00000637540 KDM2AQ9Y2K7 1162 aa6.75□□□□□ -1.33
SCN8A-213ENST00000637540 MYO3AQ8NEV4 1616 aa6.75□□□□□ -1.33
SCN8A-213ENST00000637540 SCAF1Q9H7N4 1312 aaKnown RBP6.75□□□□□ -1.33
SCN8A-213ENST00000637540 ST20-MTHFSA0A0A6YYL1 179 aa6.74□□□□□ -1.33
SCN8A-213ENST00000637540 CARD11Q9BXL7 1154 aa6.74□□□□□ -1.33
SCN8A-213ENST00000637540 TMEM131LA2VDJ0 1609 aa6.74□□□□□ -1.33
SCN8A-213ENST00000637540 ARHGEF40Q8TER5 1519 aa6.74□□□□□ -1.33
SCN8A-213ENST00000637540 MYOM1P52179 1685 aa6.74□□□□□ -1.33
SCN8A-213ENST00000637540 SETBP1Q9Y6X0 1596 aa6.74□□□□□ -1.33
SCN8A-213ENST00000637540 ROCK2O75116 1388 aaKnown RBP6.73□□□□□ -1.33
SCN8A-213ENST00000637540 NEXMIFQ5QGS0 1516 aa6.73□□□□□ -1.33
SCN8A-213ENST00000637540 CLTCQ00610 1675 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms