RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 COL17A1Q9UMD9 1497 aaPredicted RBP26.48■■□□□ 1.83
CACNA1A-241ENST00000637475 LRPPRCP42704 1394 aaKnown RBP26.48■■□□□ 1.83
CACNA1A-241ENST00000637475 E9PCH4 1651 aa26.46■■□□□ 1.83
CACNA1A-241ENST00000637475 CAMSAP2Q08AD1 1489 aa26.44■■□□□ 1.82
CACNA1A-241ENST00000637475 IPO9Q96P70 1041 aaKnown RBP26.44■■□□□ 1.82
CACNA1A-241ENST00000637475 CD109Q6YHK3 1445 aa26.43■■□□□ 1.82
CACNA1A-241ENST00000637475 PNISRQ8TF01 805 aaKnown RBP26.43■■□□□ 1.82
CACNA1A-241ENST00000637475 KDM5DQ9BY66 1539 aa26.42■■□□□ 1.82
CACNA1A-241ENST00000637475 CCDC136Q96JN2 1154 aa26.41■■□□□ 1.82
CACNA1A-241ENST00000637475 ANP32AP39687 249 aaKnown RBP26.4■■□□□ 1.82
CACNA1A-241ENST00000637475 TROQ12816 1431 aaPredicted RBP26.4■■□□□ 1.82
CACNA1A-241ENST00000637475 BRD4O60885 1362 aaPredicted RBP26.4■■□□□ 1.82
CACNA1A-241ENST00000637475 KIF15Q9NS87 1388 aa26.39■■□□□ 1.81
CACNA1A-241ENST00000637475 PAK3O75914 559 aaPredicted RBP26.38■■□□□ 1.81
CACNA1A-241ENST00000637475 SHANK2Q9UPX8 1470 aa26.36■■□□□ 1.81
CACNA1A-241ENST00000637475 KDM4FA0A1W2PPD8 638 aa26.35■■□□□ 1.81
CACNA1A-241ENST00000637475 ZMYM4Q5VZL5 1548 aa26.35■■□□□ 1.81
CACNA1A-241ENST00000637475 INSRP06213 1382 aa26.34■■□□□ 1.81
CACNA1A-241ENST00000637475 GPATCH8Q9UKJ3 1502 aaKnown RBP26.33■■□□□ 1.81
CACNA1A-241ENST00000637475 ZNF644Q9H582 1327 aaPredicted RBP26.31■■□□□ 1.8
CACNA1A-241ENST00000637475 RALBP1Q15311 655 aa26.29■■□□□ 1.8
CACNA1A-241ENST00000637475 ANKRD30AQ9BXX3 1397 aa26.29■■□□□ 1.8
CACNA1A-241ENST00000637475 ABCA9Q8IUA7 1624 aa26.28■■□□□ 1.8
CACNA1A-241ENST00000637475 MYBBP1AQ9BQG0 1328 aaKnown RBP26.28■■□□□ 1.8
CACNA1A-241ENST00000637475 TCERG1O14776 1098 aaKnown RBP26.26■■□□□ 1.79
CACNA1A-241ENST00000637475 ZBTB47Q9UFB7 747 aaPredicted RBP26.26■■□□□ 1.79
CACNA1A-241ENST00000637475 PDE3BQ13370 1112 aa26.25■■□□□ 1.79
CACNA1A-241ENST00000637475 TMC1Q8TDI8 760 aa26.25■■□□□ 1.79
CACNA1A-241ENST00000637475 ANKRD50Q9ULJ7 1429 aa26.24■■□□□ 1.79
CACNA1A-241ENST00000637475 MS4A1P11836 297 aa26.23■■□□□ 1.79
CACNA1A-241ENST00000637475 RRP1P56182 461 aaKnown RBP26.23■■□□□ 1.79
CACNA1A-241ENST00000637475 CDC42BPAQ5VT25 1732 aa26.22■■□□□ 1.79
CACNA1A-241ENST00000637475 PKD2Q13563 968 aa26.2■■□□□ 1.79
CACNA1A-241ENST00000637475 LAMC1P11047 1609 aa26.2■■□□□ 1.78
CACNA1A-241ENST00000637475 PLEKHD1A6NEE1 506 aa26.19■■□□□ 1.78
CACNA1A-241ENST00000637475 ADGRL1O94910 1474 aa26.19■■□□□ 1.78
CACNA1A-241ENST00000637475 CFDP1Q9UEE9 299 aaPredicted RBP26.18■■□□□ 1.78
CACNA1A-241ENST00000637475 PARD3Q8TEW0 1356 aa26.18■■□□□ 1.78
CACNA1A-241ENST00000637475 RTL5Q5HYW3 569 aaPredicted RBP26.18■■□□□ 1.78
CACNA1A-241ENST00000637475 USP35Q9P2H5 1018 aa26.17■■□□□ 1.78
CACNA1A-241ENST00000637475 NBR1Q14596 966 aa26.16■■□□□ 1.78
CACNA1A-241ENST00000637475 ARAP3Q8WWN8 1544 aa26.16■■□□□ 1.78
CACNA1A-241ENST00000637475 ARHGEF5Q12774 1597 aa26.15■■□□□ 1.78
CACNA1A-241ENST00000637475 TRPM1Q7Z4N2 1603 aa26.14■■□□□ 1.78
CACNA1A-241ENST00000637475 PLEKHH2Q8IVE3 1493 aa26.12■■□□□ 1.77
CACNA1A-241ENST00000637475 CARD11Q9BXL7 1154 aa26.12■■□□□ 1.77
CACNA1A-241ENST00000637475 WASHC2CQ9Y4E1 1318 aa26.12■■□□□ 1.77
CACNA1A-241ENST00000637475 NLRP13Q86W25 1043 aa26.11■■□□□ 1.77
CACNA1A-241ENST00000637475 RCAN3Q9UKA8 241 aa26.11■■□□□ 1.77
CACNA1A-241ENST00000637475 C9orf84Q5VXU9 1444 aa26.1■■□□□ 1.77
CACNA1A-241ENST00000637475 NEO1Q92859 1461 aa26.09■■□□□ 1.77
CACNA1A-241ENST00000637475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.77
CACNA1A-241ENST00000637475 BLMP54132 1417 aaPredicted RBP26.09■■□□□ 1.77
CACNA1A-241ENST00000637475 RAPGEF3O95398 923 aa26.08■■□□□ 1.77
CACNA1A-241ENST00000637475 BACH2Q9BYV9 841 aa26.08■■□□□ 1.77
CACNA1A-241ENST00000637475 GPRASP1Q5JY77 1395 aa26.08■■□□□ 1.76
CACNA1A-241ENST00000637475 TTC37Q6PGP7 1564 aa26.07■■□□□ 1.76
CACNA1A-241ENST00000637475 NUP155O75694 1391 aa26.06■■□□□ 1.76
CACNA1A-241ENST00000637475 PDE4AP27815 886 aa26.05■■□□□ 1.76
CACNA1A-241ENST00000637475 EXOC6Q8TAG9 804 aa26.05■■□□□ 1.76
CACNA1A-241ENST00000637475 ST20-MTHFSA0A0A6YYL1 179 aa26.04■■□□□ 1.76
CACNA1A-241ENST00000637475 PRAG1Q86YV5 1406 aa26.03■■□□□ 1.76
CACNA1A-241ENST00000637475 ZNF326Q5BKZ1 582 aaKnown RBP26.02■■□□□ 1.76
CACNA1A-241ENST00000637475 PRDM15P57071 1507 aaPredicted RBP26.01■■□□□ 1.75
CACNA1A-241ENST00000637475 FRMPD1Q5SYB0 1578 aa26.01■■□□□ 1.75
CACNA1A-241ENST00000637475 POLR3GLQ9BT43 218 aa26.01■■□□□ 1.75
CACNA1A-241ENST00000637475 FANCAO15360 1455 aa26■■□□□ 1.75
CACNA1A-241ENST00000637475 PPM1GO15355 546 aaPredicted RBP26■■□□□ 1.75
CACNA1A-241ENST00000637475 PER1O15534 1290 aaPredicted RBP25.98■■□□□ 1.75
CACNA1A-241ENST00000637475 EIF2AK4Q9P2K8 1649 aaKnown RBP25.97■■□□□ 1.75
CACNA1A-241ENST00000637475 FAM135AQ9P2D6 1515 aa25.97■■□□□ 1.75
CACNA1A-241ENST00000637475 UNC13BO14795 1591 aa25.96■■□□□ 1.75
CACNA1A-241ENST00000637475 CFAP74Q9C0B2 1584 aa25.95■■□□□ 1.74
CACNA1A-241ENST00000637475 DDRGK1Q96HY6 314 aa25.94■■□□□ 1.74
CACNA1A-241ENST00000637475 MAST1Q9Y2H9 1570 aa25.93■■□□□ 1.74
CACNA1A-241ENST00000637475 RICTORQ6R327 1708 aa25.92■■□□□ 1.74
CACNA1A-241ENST00000637475 PLCH2O75038 1416 aa25.91■■□□□ 1.74
CACNA1A-241ENST00000637475 RNF17Q9BXT8 1623 aaKnown RBP25.88■■□□□ 1.73
CACNA1A-241ENST00000637475 CCDC141Q6ZP82 1450 aa25.88■■□□□ 1.73
CACNA1A-241ENST00000637475 DCAF11Q8TEB1 546 aa25.87■■□□□ 1.73
CACNA1A-241ENST00000637475 ATP10AO60312 1499 aa25.86■■□□□ 1.73
CACNA1A-241ENST00000637475 PREX2Q70Z35 1606 aa25.86■■□□□ 1.73
CACNA1A-241ENST00000637475 MYO5CQ9NQX4 1742 aa25.86■■□□□ 1.73
CACNA1A-241ENST00000637475 ZNF777Q9ULD5 760 aaPredicted RBP25.86■■□□□ 1.73
CACNA1A-241ENST00000637475 CCDC144AA2RUR9 1427 aa25.85■■□□□ 1.73
CACNA1A-241ENST00000637475 A2MP01023 1474 aa25.85■■□□□ 1.73
CACNA1A-241ENST00000637475 IQGAP3Q86VI3 1631 aa25.84■■□□□ 1.73
CACNA1A-241ENST00000637475 TSPY4P0CV99 314 aa25.84■■□□□ 1.73
CACNA1A-241ENST00000637475 TSPY10P0CW01 314 aa25.84■■□□□ 1.73
CACNA1A-241ENST00000637475 CNGB1Q14028 1251 aaPredicted RBP25.84■■□□□ 1.73
CACNA1A-241ENST00000637475 ARHGEF40Q8TER5 1519 aa25.84■■□□□ 1.73
CACNA1A-241ENST00000637475 NEFMP07197 916 aa25.84■■□□□ 1.73
CACNA1A-241ENST00000637475 SAMD9LQ8IVG5 1584 aa25.83■■□□□ 1.73
CACNA1A-241ENST00000637475 KDM2BQ8NHM5 1336 aa25.83■■□□□ 1.73
CACNA1A-241ENST00000637475 RSPH4AQ5TD94 716 aa25.83■■□□□ 1.73
CACNA1A-241ENST00000637475 SCAPERQ9BY12 1400 aa25.83■■□□□ 1.72
CACNA1A-241ENST00000637475 PLA2R1Q13018 1463 aa25.81■■□□□ 1.72
CACNA1A-241ENST00000637475 TESK2Q96S53 571 aa25.8■■□□□ 1.72
CACNA1A-241ENST00000637475 ERBINQ96RT1 1412 aa25.8■■□□□ 1.72
CACNA1A-241ENST00000637475 PLXNC1O60486 1568 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms