RNA–Protein interactions for RNA: ENST00000636947.1

CACNB4-239, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 5,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-239ENST00000636947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.77
CACNB4-239ENST00000636947 NGLY1Q96IV0 654 aa10.27□□□□□ -0.77
CACNB4-239ENST00000636947 CC2D1BQ5T0F9 858 aaKnown RBP10.26□□□□□ -0.77
CACNB4-239ENST00000636947 NAP1L5Q96NT1 182 aaPredicted RBP10.26□□□□□ -0.77
CACNB4-239ENST00000636947 MARCH6O60337 910 aa10.25□□□□□ -0.77
CACNB4-239ENST00000636947 GPATCH3Q96I76 525 aa10.25□□□□□ -0.77
CACNB4-239ENST00000636947 TNIKQ9UKE5 1360 aa10.25□□□□□ -0.77
CACNB4-239ENST00000636947 NBPF8Q3BBV2 869 aa10.24□□□□□ -0.77
CACNB4-239ENST00000636947 NBPF14Q5TI25 921 aa10.24□□□□□ -0.77
CACNB4-239ENST00000636947 SENP3-EIF4A1A0A087X0R7 540 aa10.24□□□□□ -0.77
CACNB4-239ENST00000636947 RAD21O60216 631 aa10.23□□□□□ -0.77
CACNB4-239ENST00000636947 SMC4Q9NTJ3 1288 aa10.23□□□□□ -0.77
CACNB4-239ENST00000636947 U2AF1L5P0DN76 240 aaPredicted RBP10.23□□□□□ -0.77
CACNB4-239ENST00000636947 U2AF1Q01081 240 aaKnown RBP eCLIP10.23□□□□□ -0.77
CACNB4-239ENST00000636947 ERICH6BQ5W0A0 696 aa10.23□□□□□ -0.77
CACNB4-239ENST00000636947 ARHGAP35Q9NRY4 1499 aa10.23□□□□□ -0.77
CACNB4-239ENST00000636947 NEXNQ0ZGT2 675 aa10.23□□□□□ -0.77
CACNB4-239ENST00000636947 MRC2Q9UBG0 1479 aa10.22□□□□□ -0.77
CACNB4-239ENST00000636947 TRAK1Q9UPV9 953 aa10.22□□□□□ -0.77
CACNB4-239ENST00000636947 IPO8O15397 1037 aaKnown RBP10.21□□□□□ -0.77
CACNB4-239ENST00000636947 ATAD2BQ9ULI0 1458 aa10.21□□□□□ -0.77
CACNB4-239ENST00000636947 TOMM22Q9NS69 142 aa10.21□□□□□ -0.77
CACNB4-239ENST00000636947 DEKP35659 375 aaKnown RBP10.21□□□□□ -0.78
CACNB4-239ENST00000636947 PPP4R2Q9NY27 417 aa10.21□□□□□ -0.78
CACNB4-239ENST00000636947 EVC2Q86UK5 1308 aa10.21□□□□□ -0.78
CACNB4-239ENST00000636947 GOLGA6L22H0YM25 854 aa10.21□□□□□ -0.78
CACNB4-239ENST00000636947 MCCP23508 829 aa10.2□□□□□ -0.78
CACNB4-239ENST00000636947 FRAT1Q92837 279 aaPredicted RBP10.2□□□□□ -0.78
CACNB4-239ENST00000636947 PPP6R1Q9UPN7 881 aa10.2□□□□□ -0.78
CACNB4-239ENST00000636947 TOM1L2Q6ZVM7 507 aa10.2□□□□□ -0.78
CACNB4-239ENST00000636947 KIAA1211Q6ZU35 1233 aa10.2□□□□□ -0.78
CACNB4-239ENST00000636947 PRDM11Q9NQV5 511 aa10.2□□□□□ -0.78
CACNB4-239ENST00000636947 GAPVD1Q14C86 1478 aa10.19□□□□□ -0.78
CACNB4-239ENST00000636947 RAPGEF2Q9Y4G8 1499 aa10.19□□□□□ -0.78
CACNB4-239ENST00000636947 PTMAP06454 111 aaKnown RBP10.19□□□□□ -0.78
CACNB4-239ENST00000636947 ROCK2O75116 1388 aaKnown RBP10.18□□□□□ -0.78
CACNB4-239ENST00000636947 MINK1Q8N4C8 1332 aaPredicted RBP10.18□□□□□ -0.78
CACNB4-239ENST00000636947 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
CACNB4-239ENST00000636947 BCL11BQ9C0K0 894 aaPredicted RBP10.17□□□□□ -0.78
CACNB4-239ENST00000636947 DNTTIP2Q5QJE6 756 aaKnown RBP10.17□□□□□ -0.78
CACNB4-239ENST00000636947 PRG4Q92954 1404 aaPredicted RBP10.17□□□□□ -0.78
CACNB4-239ENST00000636947 IFT140Q96RY7 1462 aa10.17□□□□□ -0.78
CACNB4-239ENST00000636947 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
CACNB4-239ENST00000636947 DDX58O95786 925 aaKnown RBP10.17□□□□□ -0.78
CACNB4-239ENST00000636947 POLD1P28340 1107 aa10.17□□□□□ -0.78
CACNB4-239ENST00000636947 ADAMTS2O95450 1211 aa10.16□□□□□ -0.78
CACNB4-239ENST00000636947 NGEFQ8N5V2 710 aa10.16□□□□□ -0.78
CACNB4-239ENST00000636947 DHX57Q6P158 1386 aaKnown RBP10.16□□□□□ -0.78
CACNB4-239ENST00000636947 BEGAINQ9BUH8 593 aa10.16□□□□□ -0.78
CACNB4-239ENST00000636947 CCDC34Q96HJ3 373 aa10.15□□□□□ -0.78
CACNB4-239ENST00000636947 GRIN2BQ13224 1484 aa10.15□□□□□ -0.78
CACNB4-239ENST00000636947 RBM19Q9Y4C8 960 aaKnown RBP10.15□□□□□ -0.78
CACNB4-239ENST00000636947 WWC1Q8IX03 1113 aa10.15□□□□□ -0.78
CACNB4-239ENST00000636947 B4GALNT3Q6L9W6 998 aa10.15□□□□□ -0.79
CACNB4-239ENST00000636947 NLRP6P59044 892 aa10.15□□□□□ -0.79
CACNB4-239ENST00000636947 CHAF1AQ13111 956 aaPredicted RBP10.15□□□□□ -0.79
CACNB4-239ENST00000636947 WWC2Q6AWC2 1192 aa10.15□□□□□ -0.79
CACNB4-239ENST00000636947 TATP17735 454 aaPredicted RBP10.14□□□□□ -0.79
CACNB4-239ENST00000636947 RASSF8Q8NHQ8 419 aa10.14□□□□□ -0.79
CACNB4-239ENST00000636947 TPRNQ4KMQ1 711 aa10.14□□□□□ -0.79
CACNB4-239ENST00000636947 ABTB2Q8N961 1025 aa10.14□□□□□ -0.79
CACNB4-239ENST00000636947 CCDC88BA6NC98 1476 aa10.14□□□□□ -0.79
CACNB4-239ENST00000636947 MROH2BQ7Z745 1585 aa10.14□□□□□ -0.79
CACNB4-239ENST00000636947 GOLGA6L6A8MZA4 724 aa10.14□□□□□ -0.79
CACNB4-239ENST00000636947 HMMRO75330 724 aa10.14□□□□□ -0.79
CACNB4-239ENST00000636947 GOLGA6L4A6NEF3 574 aa10.13□□□□□ -0.79
CACNB4-239ENST00000636947 SAMD1Q6SPF0 538 aaPredicted RBP10.13□□□□□ -0.79
CACNB4-239ENST00000636947 AQRO60306 1485 aaKnown RBP eCLIP10.13□□□□□ -0.79
CACNB4-239ENST00000636947 KIF6Q6ZMV9 814 aa10.13□□□□□ -0.79
CACNB4-239ENST00000636947 CCDC43Q96MW1 224 aaKnown RBP10.13□□□□□ -0.79
CACNB4-239ENST00000636947 SMG6Q86US8 1419 aaKnown RBP10.13□□□□□ -0.79
CACNB4-239ENST00000636947 SETD5Q9C0A6 1442 aa10.13□□□□□ -0.79
CACNB4-239ENST00000636947 NLRP13Q86W25 1043 aa10.13□□□□□ -0.79
CACNB4-239ENST00000636947 KIAA2012Q0VF49 1180 aa10.12□□□□□ -0.79
CACNB4-239ENST00000636947 TTLL12Q14166 644 aaPredicted RBP10.12□□□□□ -0.79
CACNB4-239ENST00000636947 DHX16O60231 1041 aaKnown RBP10.12□□□□□ -0.79
CACNB4-239ENST00000636947 RGS3P49796 1198 aa10.12□□□□□ -0.79
CACNB4-239ENST00000636947 R3HCC1Q9Y3T6 440 aaKnown RBP10.11□□□□□ -0.79
CACNB4-239ENST00000636947 CCDC144AA2RUR9 1427 aa10.11□□□□□ -0.79
CACNB4-239ENST00000636947 NRDCO43847 1150 aa10.11□□□□□ -0.79
CACNB4-239ENST00000636947 L1TD1Q5T7N2 865 aaKnown RBP10.11□□□□□ -0.79
CACNB4-239ENST00000636947 SLC4A10Q6U841 1118 aa10.1□□□□□ -0.79
CACNB4-239ENST00000636947 SYNJ2O15056 1496 aa10.1□□□□□ -0.79
CACNB4-239ENST00000636947 LRPPRCP42704 1394 aaKnown RBP10.1□□□□□ -0.79
CACNB4-239ENST00000636947 NUTM2GQ5VZR2 741 aa10.09□□□□□ -0.79
CACNB4-239ENST00000636947 AKAP17AQ02040 695 aaKnown RBP10.09□□□□□ -0.79
CACNB4-239ENST00000636947 DDX54Q8TDD1 881 aaKnown RBP10.09□□□□□ -0.79
CACNB4-239ENST00000636947 TMOD2Q9NZR1 351 aa10.09□□□□□ -0.79
CACNB4-239ENST00000636947 KTN1Q86UP2 1357 aaKnown RBP10.08□□□□□ -0.8
CACNB4-239ENST00000636947 PLEKHO1Q53GL0 409 aaPredicted RBP10.08□□□□□ -0.8
CACNB4-239ENST00000636947 SPG7Q9UQ90 795 aa10.08□□□□□ -0.8
CACNB4-239ENST00000636947 CLEC11AQ9Y240 323 aa10.08□□□□□ -0.8
CACNB4-239ENST00000636947 FHOD3Q2V2M9 1422 aa10.08□□□□□ -0.8
CACNB4-239ENST00000636947 CGNL1Q0VF96 1302 aa10.07□□□□□ -0.8
CACNB4-239ENST00000636947 SYNE3Q6ZMZ3 975 aa10.07□□□□□ -0.8
CACNB4-239ENST00000636947 APBB1O00213 710 aa10.07□□□□□ -0.8
CACNB4-239ENST00000636947 CEP89Q96ST8 783 aa10.07□□□□□ -0.8
CACNB4-239ENST00000636947 EIF2S2P20042 333 aaKnown RBP10.07□□□□□ -0.8
CACNB4-239ENST00000636947 MIA2Q96PC5 1412 aa10.07□□□□□ -0.8
CACNB4-239ENST00000636947 DNAJC5BQ9UF47 199 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms