RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 NGDNQ8NEJ9 315 aaKnown RBP18.03■□□□□ 0.48
GABRB3-219ENST00000636466 NCOA2Q15596 1464 aa18.03■□□□□ 0.48
GABRB3-219ENST00000636466 TCERG1O14776 1098 aaKnown RBP18.02■□□□□ 0.48
GABRB3-219ENST00000636466 CENPJQ9HC77 1338 aaPredicted RBP18.02■□□□□ 0.48
GABRB3-219ENST00000636466 RWDD1Q9H446 243 aaPredicted RBP18.02■□□□□ 0.48
GABRB3-219ENST00000636466 MFAP1P55081 439 aaKnown RBP18.02■□□□□ 0.48
GABRB3-219ENST00000636466 WASHC2AQ641Q2 1341 aa18.01■□□□□ 0.47
GABRB3-219ENST00000636466 PRXQ9BXM0 1461 aa18.01■□□□□ 0.47
GABRB3-219ENST00000636466 CSB-PGBD3P0DP91 1061 aa18.01■□□□□ 0.47
GABRB3-219ENST00000636466 EIF3AQ14152 1382 aaKnown RBP18.01■□□□□ 0.47
GABRB3-219ENST00000636466 TMEM132EQ6IEE7 984 aa18■□□□□ 0.47
GABRB3-219ENST00000636466 SLC4A3P48751 1232 aa18■□□□□ 0.47
GABRB3-219ENST00000636466 DNTTIP2Q5QJE6 756 aaKnown RBP18■□□□□ 0.47
GABRB3-219ENST00000636466 CUX1P39880 1505 aa18■□□□□ 0.47
GABRB3-219ENST00000636466 UACAQ9BZF9 1416 aa17.99■□□□□ 0.47
GABRB3-219ENST00000636466 ZRSR1Q15695 479 aaKnown RBP17.99■□□□□ 0.47
GABRB3-219ENST00000636466 CASKIN1Q8WXD9 1431 aa17.98■□□□□ 0.47
GABRB3-219ENST00000636466 ANKRD50Q9ULJ7 1429 aa17.98■□□□□ 0.47
GABRB3-219ENST00000636466 NBPF1Q3BBV0 1214 aa17.98■□□□□ 0.47
GABRB3-219ENST00000636466 TULP1O00294 542 aaPredicted RBP17.97■□□□□ 0.47
GABRB3-219ENST00000636466 PDE3BQ13370 1112 aa17.97■□□□□ 0.47
GABRB3-219ENST00000636466 NBPF8Q3BBV2 869 aa17.97■□□□□ 0.47
GABRB3-219ENST00000636466 COG6Q9Y2V7 657 aa17.97■□□□□ 0.47
GABRB3-219ENST00000636466 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
GABRB3-219ENST00000636466 AMPHP49418 695 aa17.96■□□□□ 0.47
GABRB3-219ENST00000636466 CRBNQ96SW2 442 aa17.96■□□□□ 0.47
GABRB3-219ENST00000636466 POLA1P09884 1462 aaPredicted RBP17.95■□□□□ 0.46
GABRB3-219ENST00000636466 VGFO15240 615 aaPredicted RBP17.95■□□□□ 0.46
GABRB3-219ENST00000636466 CCDC7Q96M83 1385 aa17.95■□□□□ 0.46
GABRB3-219ENST00000636466 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
GABRB3-219ENST00000636466 FAM69CQ0P6D2 419 aa17.93■□□□□ 0.46
GABRB3-219ENST00000636466 NAP1L5Q96NT1 182 aaPredicted RBP17.93■□□□□ 0.46
GABRB3-219ENST00000636466 STK31Q9BXU1 1019 aa17.93■□□□□ 0.46
GABRB3-219ENST00000636466 EID1Q9Y6B2 187 aa17.93■□□□□ 0.46
GABRB3-219ENST00000636466 PRG4Q92954 1404 aaPredicted RBP17.92■□□□□ 0.46
GABRB3-219ENST00000636466 CFAP70Q5T0N1 1121 aa17.92■□□□□ 0.46
GABRB3-219ENST00000636466 IPO9Q96P70 1041 aaKnown RBP17.92■□□□□ 0.46
GABRB3-219ENST00000636466 RRP1P56182 461 aaKnown RBP17.92■□□□□ 0.46
GABRB3-219ENST00000636466 CALD1Q05682 793 aaKnown RBP17.92■□□□□ 0.46
GABRB3-219ENST00000636466 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
GABRB3-219ENST00000636466 NOL8Q76FK4 1167 aaKnown RBP17.91■□□□□ 0.46
GABRB3-219ENST00000636466 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
GABRB3-219ENST00000636466 RRBP1Q9P2E9 1410 aaKnown RBP17.9■□□□□ 0.46
GABRB3-219ENST00000636466 GRIN2BQ13224 1484 aa17.9■□□□□ 0.46
GABRB3-219ENST00000636466 PMFBP1Q8TBY8 1022 aa17.9■□□□□ 0.46
GABRB3-219ENST00000636466 GOLGA6L4A6NEF3 574 aa17.89■□□□□ 0.45
GABRB3-219ENST00000636466 CCDC184Q52MB2 194 aa17.88■□□□□ 0.45
GABRB3-219ENST00000636466 TRIM6-TRIM34B2RNG4 842 aa17.88■□□□□ 0.45
GABRB3-219ENST00000636466 PDE4AP27815 886 aa17.88■□□□□ 0.45
GABRB3-219ENST00000636466 GLIPR1L2Q4G1C9 344 aa17.88■□□□□ 0.45
GABRB3-219ENST00000636466 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
GABRB3-219ENST00000636466 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
GABRB3-219ENST00000636466 CGNL1Q0VF96 1302 aa17.87■□□□□ 0.45
GABRB3-219ENST00000636466 GGNBP2Q9H3C7 697 aa17.87■□□□□ 0.45
GABRB3-219ENST00000636466 CHMP3Q9Y3E7 222 aa17.87■□□□□ 0.45
GABRB3-219ENST00000636466 MCCP23508 829 aa17.86■□□□□ 0.45
GABRB3-219ENST00000636466 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
GABRB3-219ENST00000636466 KIAA1211Q6ZU35 1233 aa17.86■□□□□ 0.45
GABRB3-219ENST00000636466 CDCA7LQ96GN5 454 aa17.86■□□□□ 0.45
GABRB3-219ENST00000636466 CABP2Q9NPB3 220 aa17.85■□□□□ 0.45
GABRB3-219ENST00000636466 TOP2BQ02880 1626 aa17.85■□□□□ 0.45
GABRB3-219ENST00000636466 FYCO1Q9BQS8 1478 aa17.85■□□□□ 0.45
GABRB3-219ENST00000636466 NECTIN2Q92692 538 aa17.84■□□□□ 0.45
GABRB3-219ENST00000636466 ADAMTS8Q9UP79 889 aa17.83■□□□□ 0.44
GABRB3-219ENST00000636466 COG3Q96JB2 828 aa17.82■□□□□ 0.44
GABRB3-219ENST00000636466 E9PSI1 815 aa17.82■□□□□ 0.44
GABRB3-219ENST00000636466 FOXD4L5Q5VV16 416 aaPredicted RBP17.82■□□□□ 0.44
GABRB3-219ENST00000636466 FOXD4L4Q8WXT5 416 aaPredicted RBP17.82■□□□□ 0.44
GABRB3-219ENST00000636466 ANKRD45Q5TZF3 282 aa17.82■□□□□ 0.44
GABRB3-219ENST00000636466 HMOX1P09601 288 aa17.81■□□□□ 0.44
GABRB3-219ENST00000636466 CCDC9Q9Y3X0 531 aaKnown RBP17.81■□□□□ 0.44
GABRB3-219ENST00000636466 CDK11BP21127 795 aaKnown RBP17.79■□□□□ 0.44
GABRB3-219ENST00000636466 RIPK4P57078 832 aa17.79■□□□□ 0.44
GABRB3-219ENST00000636466 ZKSCAN2Q63HK3 967 aa17.79■□□□□ 0.44
GABRB3-219ENST00000636466 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
GABRB3-219ENST00000636466 RAPGEF3O95398 923 aa17.79■□□□□ 0.44
GABRB3-219ENST00000636466 CENPQQ7L2Z9 268 aaPredicted RBP17.77■□□□□ 0.44
GABRB3-219ENST00000636466 HMMRO75330 724 aa17.77■□□□□ 0.44
GABRB3-219ENST00000636466 NUTM2GQ5VZR2 741 aa17.77■□□□□ 0.43
GABRB3-219ENST00000636466 NGEFQ8N5V2 710 aa17.77■□□□□ 0.43
GABRB3-219ENST00000636466 SLC12A5Q9H2X9 1139 aa17.77■□□□□ 0.43
GABRB3-219ENST00000636466 DIAPH1O60610 1272 aaKnown RBP17.77■□□□□ 0.43
GABRB3-219ENST00000636466 LMOD3Q0VAK6 560 aa17.77■□□□□ 0.43
GABRB3-219ENST00000636466 FOXD4L6Q3SYB3 417 aaPredicted RBP17.76■□□□□ 0.43
GABRB3-219ENST00000636466 FOXD4L3Q6VB84 417 aaPredicted RBP17.76■□□□□ 0.43
GABRB3-219ENST00000636466 CNTLNQ9NXG0 1405 aa17.76■□□□□ 0.43
GABRB3-219ENST00000636466 EIF2S2P20042 333 aaKnown RBP17.76■□□□□ 0.43
GABRB3-219ENST00000636466 MTHFSP49914 203 aa17.76■□□□□ 0.43
GABRB3-219ENST00000636466 PANK1Q8TE04 598 aa17.75■□□□□ 0.43
GABRB3-219ENST00000636466 AMER1Q5JTC6 1135 aaPredicted RBP17.75■□□□□ 0.43
GABRB3-219ENST00000636466 SNAPC4Q5SXM2 1469 aa17.75■□□□□ 0.43
GABRB3-219ENST00000636466 CDK13Q14004 1512 aaKnown RBP17.75■□□□□ 0.43
GABRB3-219ENST00000636466 GBP4Q96PP9 640 aa17.75■□□□□ 0.43
GABRB3-219ENST00000636466 ARHGAP5Q13017 1502 aa17.74■□□□□ 0.43
GABRB3-219ENST00000636466 FAM161AQ3B820 660 aa17.74■□□□□ 0.43
GABRB3-219ENST00000636466 GORABQ5T7V8 394 aa17.74■□□□□ 0.43
GABRB3-219ENST00000636466 ISY1Q9ULR0 285 aaKnown RBP17.74■□□□□ 0.43
GABRB3-219ENST00000636466 SCAPERQ9BY12 1400 aa17.74■□□□□ 0.43
GABRB3-219ENST00000636466 RILPL2Q969X0 211 aa17.73■□□□□ 0.43
GABRB3-219ENST00000636466 C11orf95C9JLR9 678 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms