RNA–Protein interactions for RNA: ENST00000636193.1

SYNGAP1-213, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-213ENST00000636193 PRR23BQ6ZRT6 265 aa1.25□□□□□ -2.21
SYNGAP1-213ENST00000636193 SYMPKQ92797 1274 aaKnown RBP1.25□□□□□ -2.21
SYNGAP1-213ENST00000636193 AIDAQ96BJ3 306 aa1.25□□□□□ -2.21
SYNGAP1-213ENST00000636193 RUNDC1Q96C34 613 aa1.25□□□□□ -2.21
SYNGAP1-213ENST00000636193 PCF11O94913 1555 aaKnown RBP1.25□□□□□ -2.21
SYNGAP1-213ENST00000636193 TPRP12270 2363 aaKnown RBP1.25□□□□□ -2.21
SYNGAP1-213ENST00000636193 SHROOM4Q9ULL8 1493 aa1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 CEP295Q9C0D2 2601 aa1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 SPTAN1Q13813 2472 aaKnown RBP1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 TNFRSF10AO00220 468 aa1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 ST18O60284 1047 aa1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 COL9A3Q14050 684 aaPredicted RBP1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 ZNF772Q68DY9 489 aaPredicted RBP1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 PIK3R5Q8WYR1 880 aa1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 CDCA7Q9BWT1 371 aaPredicted RBP1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 AHDC1Q5TGY3 1603 aaPredicted RBP1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 BAZ1AQ9NRL2 1556 aaPredicted RBP1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 SZT2Q5T011 3432 aa1.24□□□□□ -2.21
SYNGAP1-213ENST00000636193 FN1P02751 2386 aaKnown RBP1.23□□□□□ -2.21
SYNGAP1-213ENST00000636193 NBEAL1Q6ZS30 2694 aa1.23□□□□□ -2.21
SYNGAP1-213ENST00000636193 TOP2BQ02880 1626 aa1.23□□□□□ -2.21
SYNGAP1-213ENST00000636193 ERBB4Q15303 1308 aa1.23□□□□□ -2.21
SYNGAP1-213ENST00000636193 BPTFQ12830 3046 aa1.23□□□□□ -2.21
SYNGAP1-213ENST00000636193 FOXN1O15353 648 aa1.23□□□□□ -2.21
SYNGAP1-213ENST00000636193 ITGBL1O95965 494 aaPredicted RBP1.23□□□□□ -2.21
SYNGAP1-213ENST00000636193 RANGAP1P46060 587 aaPredicted RBP1.23□□□□□ -2.21
SYNGAP1-213ENST00000636193 REPIN1Q9BWE0 567 aaKnown RBP1.23□□□□□ -2.21
SYNGAP1-213ENST00000636193 KRTAP9-2Q9BYQ4 174 aa1.23□□□□□ -2.21
SYNGAP1-213ENST00000636193 MUC6Q6W4X9 2439 aa1.23□□□□□ -2.21
SYNGAP1-213ENST00000636193 ATAD2Q6PL18 1390 aa1.22□□□□□ -2.21
SYNGAP1-213ENST00000636193 ARID3CA6NKF2 412 aa1.22□□□□□ -2.21
SYNGAP1-213ENST00000636193 PPP1R37O75864 691 aa1.22□□□□□ -2.21
SYNGAP1-213ENST00000636193 SNRPBP14678 240 aaKnown RBP1.22□□□□□ -2.21
SYNGAP1-213ENST00000636193 POU4F1Q01851 419 aa1.22□□□□□ -2.21
SYNGAP1-213ENST00000636193 KRTAP21-3Q3LHN1 58 aa1.22□□□□□ -2.21
SYNGAP1-213ENST00000636193 ZNF526Q8TF50 670 aaPredicted RBP1.22□□□□□ -2.21
SYNGAP1-213ENST00000636193 EMID1Q96A84 441 aaPredicted RBP1.22□□□□□ -2.21
SYNGAP1-213ENST00000636193 LAMA2P24043 3122 aaKnown RBP1.22□□□□□ -2.21
SYNGAP1-213ENST00000636193 HIVEP2P31629 2446 aa1.22□□□□□ -2.21
SYNGAP1-213ENST00000636193 SNAPC4Q5SXM2 1469 aa1.22□□□□□ -2.21
SYNGAP1-213ENST00000636193 CEP250Q9BV73 2442 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 FLNAP21333 2647 aaKnown RBP1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 CNOT1A5YKK6 2376 aaKnown RBP1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 WDFY4Q6ZS81 3184 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 ZFHX4Q86UP3 3567 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 ZFYVE26Q68DK2 2539 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 LCHNA4D1U4 455 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 NTRK1P04629 796 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 SOX10P56693 466 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 FAM69CQ0P6D2 419 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 SF3B2Q13435 895 aaKnown RBP1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 ANKRD13DQ6ZTN6 518 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 PROM2Q8N271 834 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 GVINP1Q7Z2Y8 2422 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 NHSL1Q5SYE7 1610 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 OTOGLQ3ZCN5 2332 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 NINLQ9Y2I6 1382 aa1.21□□□□□ -2.22
SYNGAP1-213ENST00000636193 REV3LO60673 3130 aa1.2□□□□□ -2.22
SYNGAP1-213ENST00000636193 NESP48681 1621 aa1.2□□□□□ -2.22
SYNGAP1-213ENST00000636193 EGFRP00533 1210 aa1.2□□□□□ -2.22
SYNGAP1-213ENST00000636193 MAPK8IP2Q13387 824 aaPredicted RBP1.2□□□□□ -2.22
SYNGAP1-213ENST00000636193 R3HDM1Q15032 1099 aaKnown RBP1.2□□□□□ -2.22
SYNGAP1-213ENST00000636193 RBMXL1Q96E39 390 aaKnown RBP1.2□□□□□ -2.22
SYNGAP1-213ENST00000636193 FMNL2Q96PY5 1086 aa1.2□□□□□ -2.22
SYNGAP1-213ENST00000636193 C1QTNF1Q9BXJ1 281 aa1.2□□□□□ -2.22
SYNGAP1-213ENST00000636193 ZNF219Q9P2Y4 722 aaPredicted RBP1.2□□□□□ -2.22
SYNGAP1-213ENST00000636193 SPG7Q9UQ90 795 aa1.2□□□□□ -2.22
SYNGAP1-213ENST00000636193 CREBBPQ92793 2442 aa1.2□□□□□ -2.22
SYNGAP1-213ENST00000636193 PIEZO2Q9H5I5 2752 aa1.19□□□□□ -2.22
SYNGAP1-213ENST00000636193 VCANP13611 3396 aa1.19□□□□□ -2.22
SYNGAP1-213ENST00000636193 KRTAP9-7A8MTY7 169 aa1.19□□□□□ -2.22
SYNGAP1-213ENST00000636193 LRRC41Q15345 812 aa1.19□□□□□ -2.22
SYNGAP1-213ENST00000636193 GPR162Q16538 588 aa1.19□□□□□ -2.22
SYNGAP1-213ENST00000636193 FHOD3Q2V2M9 1422 aa1.19□□□□□ -2.22
SYNGAP1-213ENST00000636193 MEX3CQ5U5Q3 659 aaKnown RBP1.19□□□□□ -2.22
SYNGAP1-213ENST00000636193 USP9YO00507 2555 aaPredicted RBP1.19□□□□□ -2.22
SYNGAP1-213ENST00000636193 PKD1L1Q8TDX9 2849 aa1.19□□□□□ -2.22
SYNGAP1-213ENST00000636193 CHD4Q14839 1912 aa1.19□□□□□ -2.22
SYNGAP1-213ENST00000636193 MUC2Q02817 5179 aa1.19□□□□□ -2.22
SYNGAP1-213ENST00000636193 ACACBO00763 2458 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 PCNX1Q96RV3 2341 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 NCKAP5LQ9HCH0 1330 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 HIVEP3Q5T1R4 2406 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 CARMIL2Q6F5E8 1435 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 CELSR3Q9NYQ7 3312 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 TENM4Q6N022 2769 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 SRSF11Q05519 484 aaKnown RBP1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 KCNC3Q14003 757 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 DEFB132Q7Z7B7 95 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 ZNF513Q8N8E2 541 aaPredicted RBP1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 CABLES1Q8TDN4 633 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 CHAMP1Q96JM3 812 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 CAMKK2Q96RR4 588 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 CEP290O15078 2479 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 CFAP47Q6ZTR5 3102 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 CC2D2AQ9P2K1 1620 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 TLN1Q9Y490 2541 aaKnown RBP1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 TEX15Q9BXT5 2789 aa1.18□□□□□ -2.22
SYNGAP1-213ENST00000636193 FBN2P35556 2912 aa1.17□□□□□ -2.22
SYNGAP1-213ENST00000636193 UBR5O95071 2799 aaPredicted RBP1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms