RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 WASHC2CQ9Y4E1 1318 aa12.04□□□□□ -0.48
GABRB3-217ENST00000635832 TPD52L1Q16890 204 aaPredicted RBP12.04□□□□□ -0.48
GABRB3-217ENST00000635832 ARHGAP35Q9NRY4 1499 aa12.04□□□□□ -0.48
GABRB3-217ENST00000635832 PHF14O94880 888 aa12.04□□□□□ -0.48
GABRB3-217ENST00000635832 RSPH4AQ5TD94 716 aa12.04□□□□□ -0.48
GABRB3-217ENST00000635832 CUX2O14529 1486 aa12.03□□□□□ -0.48
GABRB3-217ENST00000635832 LTV1Q96GA3 475 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-217ENST00000635832 NUP155O75694 1391 aa12.03□□□□□ -0.48
GABRB3-217ENST00000635832 NACADO15069 1562 aa12.02□□□□□ -0.49
GABRB3-217ENST00000635832 HSPA5P11021 654 aaKnown RBP12.02□□□□□ -0.49
GABRB3-217ENST00000635832 CPLX2Q6PUV4 134 aaKnown RBP12.02□□□□□ -0.49
GABRB3-217ENST00000635832 CCDC47Q96A33 483 aaKnown RBP12.02□□□□□ -0.49
GABRB3-217ENST00000635832 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
GABRB3-217ENST00000635832 ST18O60284 1047 aa12.01□□□□□ -0.49
GABRB3-217ENST00000635832 TPM1P09493 284 aa12.01□□□□□ -0.49
GABRB3-217ENST00000635832 PDS5BQ9NTI5 1447 aa12.01□□□□□ -0.49
GABRB3-217ENST00000635832 TTC5Q8N0Z6 440 aa12.01□□□□□ -0.49
GABRB3-217ENST00000635832 CCDC180Q9P1Z9 1646 aa12□□□□□ -0.49
GABRB3-217ENST00000635832 PES1O00541 588 aaKnown RBP12□□□□□ -0.49
GABRB3-217ENST00000635832 NEXNQ0ZGT2 675 aa12□□□□□ -0.49
GABRB3-217ENST00000635832 SETD5Q9C0A6 1442 aa12□□□□□ -0.49
GABRB3-217ENST00000635832 H3BQV1 296 aa11.99□□□□□ -0.49
GABRB3-217ENST00000635832 IFFO2Q5TF58 517 aa11.99□□□□□ -0.49
GABRB3-217ENST00000635832 ANO8Q9HCE9 1232 aaPredicted RBP11.99□□□□□ -0.49
GABRB3-217ENST00000635832 CCDC70Q6NSX1 233 aa11.99□□□□□ -0.49
GABRB3-217ENST00000635832 FAM184AQ8NB25 1140 aa11.99□□□□□ -0.49
GABRB3-217ENST00000635832 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.99□□□□□ -0.49
GABRB3-217ENST00000635832 MFAP1P55081 439 aaKnown RBP11.98□□□□□ -0.49
GABRB3-217ENST00000635832 TNNT3P45378 269 aaPredicted RBP11.98□□□□□ -0.49
GABRB3-217ENST00000635832 WASHC2AQ641Q2 1341 aa11.98□□□□□ -0.49
GABRB3-217ENST00000635832 TEFQ10587 303 aa11.98□□□□□ -0.49
GABRB3-217ENST00000635832 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
GABRB3-217ENST00000635832 ATP6V1DQ9Y5K8 247 aa11.97□□□□□ -0.49
GABRB3-217ENST00000635832 CENPJQ9HC77 1338 aaPredicted RBP11.97□□□□□ -0.49
GABRB3-217ENST00000635832 RAD21O60216 631 aa11.97□□□□□ -0.49
GABRB3-217ENST00000635832 TRIM29Q14134 588 aa11.97□□□□□ -0.49
GABRB3-217ENST00000635832 CCDC43Q96MW1 224 aaKnown RBP11.97□□□□□ -0.49
GABRB3-217ENST00000635832 COG3Q96JB2 828 aa11.96□□□□□ -0.49
GABRB3-217ENST00000635832 VPS37DQ86XT2 251 aa11.96□□□□□ -0.5
GABRB3-217ENST00000635832 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.96□□□□□ -0.5
GABRB3-217ENST00000635832 FMN1Q68DA7 1419 aa11.95□□□□□ -0.5
GABRB3-217ENST00000635832 UACAQ9BZF9 1416 aa11.95□□□□□ -0.5
GABRB3-217ENST00000635832 PHLDB1Q86UU1 1377 aa11.95□□□□□ -0.5
GABRB3-217ENST00000635832 ANKRD20A12PQ8NF67 263 aa11.95□□□□□ -0.5
GABRB3-217ENST00000635832 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
GABRB3-217ENST00000635832 DHX16O60231 1041 aaKnown RBP11.94□□□□□ -0.5
GABRB3-217ENST00000635832 RUFY2Q8WXA3 655 aa11.94□□□□□ -0.5
GABRB3-217ENST00000635832 MPHOSPH9Q99550 1183 aa11.94□□□□□ -0.5
GABRB3-217ENST00000635832 IPO7O95373 1038 aaKnown RBP11.94□□□□□ -0.5
GABRB3-217ENST00000635832 PDE3BQ13370 1112 aa11.94□□□□□ -0.5
GABRB3-217ENST00000635832 NOL8Q76FK4 1167 aaKnown RBP11.93□□□□□ -0.5
GABRB3-217ENST00000635832 GOLGA6L3A6NEY3 463 aa11.93□□□□□ -0.5
GABRB3-217ENST00000635832 SLKQ9H2G2 1235 aaPredicted RBP11.93□□□□□ -0.5
GABRB3-217ENST00000635832 DDX58O95786 925 aaKnown RBP11.93□□□□□ -0.5
GABRB3-217ENST00000635832 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
GABRB3-217ENST00000635832 FBXW7Q969H0 707 aa11.93□□□□□ -0.5
GABRB3-217ENST00000635832 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
GABRB3-217ENST00000635832 GOLGA6L19H0YKK7 550 aa11.92□□□□□ -0.5
GABRB3-217ENST00000635832 SETQ01105 290 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-217ENST00000635832 GZF1Q9H116 711 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-217ENST00000635832 VGFO15240 615 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-217ENST00000635832 R3HCC1Q9Y3T6 440 aaKnown RBP11.92□□□□□ -0.5
GABRB3-217ENST00000635832 DIAPH3Q9NSV4 1193 aa11.92□□□□□ -0.5
GABRB3-217ENST00000635832 HOOK1Q9UJC3 728 aaKnown RBP11.92□□□□□ -0.5
GABRB3-217ENST00000635832 RBM33Q96EV2 1170 aaKnown RBP11.92□□□□□ -0.5
GABRB3-217ENST00000635832 PHF23Q9BUL5 403 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-217ENST00000635832 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
GABRB3-217ENST00000635832 BECN2A8MW95 431 aa11.91□□□□□ -0.5
GABRB3-217ENST00000635832 TRDNQ13061 729 aa11.91□□□□□ -0.5
GABRB3-217ENST00000635832 NLRP13Q86W25 1043 aa11.91□□□□□ -0.5
GABRB3-217ENST00000635832 BAZ1AQ9NRL2 1556 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-217ENST00000635832 GPS2Q13227 327 aa11.91□□□□□ -0.5
GABRB3-217ENST00000635832 NUTM2DQ5VT03 806 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-217ENST00000635832 PCMTD1Q96MG8 357 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-217ENST00000635832 C9orf78Q9NZ63 289 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-217ENST00000635832 ERICH2A1L162 156 aa11.9□□□□□ -0.5
GABRB3-217ENST00000635832 RILPL2Q969X0 211 aa11.9□□□□□ -0.5
GABRB3-217ENST00000635832 EVC2Q86UK5 1308 aa11.89□□□□□ -0.51
GABRB3-217ENST00000635832 CLUAP1Q96AJ1 413 aa11.89□□□□□ -0.51
GABRB3-217ENST00000635832 ZKSCAN1P17029 563 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-217ENST00000635832 SYTL4Q96C24 671 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-217ENST00000635832 CPLX1O14810 134 aa11.89□□□□□ -0.51
GABRB3-217ENST00000635832 APPP05067 770 aa11.89□□□□□ -0.51
GABRB3-217ENST00000635832 SOGA1O94964 1423 aa11.89□□□□□ -0.51
GABRB3-217ENST00000635832 TRAK1Q9UPV9 953 aa11.89□□□□□ -0.51
GABRB3-217ENST00000635832 CGNL1Q0VF96 1302 aa11.88□□□□□ -0.51
GABRB3-217ENST00000635832 FOXD1Q16676 465 aa11.88□□□□□ -0.51
GABRB3-217ENST00000635832 HNRNPMP52272 730 aaKnown RBP eCLIP11.88□□□□□ -0.51
GABRB3-217ENST00000635832 PSME1Q06323 249 aa11.88□□□□□ -0.51
GABRB3-217ENST00000635832 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
GABRB3-217ENST00000635832 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.87□□□□□ -0.51
GABRB3-217ENST00000635832 MCTP1Q6DN14 999 aa11.87□□□□□ -0.51
GABRB3-217ENST00000635832 IFIT2P09913 472 aaKnown RBP11.87□□□□□ -0.51
GABRB3-217ENST00000635832 CCDC146Q8IYE0 955 aa11.87□□□□□ -0.51
GABRB3-217ENST00000635832 RNF20Q5VTR2 975 aa11.87□□□□□ -0.51
GABRB3-217ENST00000635832 CCDC18Q5T9S5 1454 aa11.86□□□□□ -0.51
GABRB3-217ENST00000635832 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.86□□□□□ -0.51
GABRB3-217ENST00000635832 NGEFQ8N5V2 710 aa11.86□□□□□ -0.51
GABRB3-217ENST00000635832 ODF2Q5BJF6 829 aa11.86□□□□□ -0.51
GABRB3-217ENST00000635832 WWC2Q6AWC2 1192 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms