RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 ARHGEF12Q9NZN5 1544 aa17.85■□□□□ 0.45
BRF1-222ENST00000635152 NBPF1Q3BBV0 1214 aa17.85■□□□□ 0.45
BRF1-222ENST00000635152 PLEKHH2Q8IVE3 1493 aa17.84■□□□□ 0.45
BRF1-222ENST00000635152 ARID4BQ4LE39 1312 aaPredicted RBP17.84■□□□□ 0.45
BRF1-222ENST00000635152 ABCC2Q92887 1545 aa17.84■□□□□ 0.45
BRF1-222ENST00000635152 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
BRF1-222ENST00000635152 SHROOM2Q13796 1616 aa17.82■□□□□ 0.44
BRF1-222ENST00000635152 BCL11AQ9H165 835 aa17.81■□□□□ 0.44
BRF1-222ENST00000635152 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
BRF1-222ENST00000635152 RBM19Q9Y4C8 960 aaKnown RBP17.81■□□□□ 0.44
BRF1-222ENST00000635152 PLA2R1Q13018 1463 aa17.8■□□□□ 0.44
BRF1-222ENST00000635152 PRAG1Q86YV5 1406 aa17.77■□□□□ 0.44
BRF1-222ENST00000635152 AFAP1Q8N556 730 aa17.77■□□□□ 0.44
BRF1-222ENST00000635152 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
BRF1-222ENST00000635152 PLCH2O75038 1416 aa17.76■□□□□ 0.43
BRF1-222ENST00000635152 MYO5CQ9NQX4 1742 aa17.76■□□□□ 0.43
BRF1-222ENST00000635152 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
BRF1-222ENST00000635152 B4GALNT3Q6L9W6 998 aa17.74■□□□□ 0.43
BRF1-222ENST00000635152 PPP4R2Q9NY27 417 aa17.74■□□□□ 0.43
BRF1-222ENST00000635152 A2MP01023 1474 aa17.74■□□□□ 0.43
BRF1-222ENST00000635152 MAST1Q9Y2H9 1570 aa17.73■□□□□ 0.43
BRF1-222ENST00000635152 MYT1LQ9UL68 1186 aa17.72■□□□□ 0.43
BRF1-222ENST00000635152 UNC13BO14795 1591 aa17.72■□□□□ 0.43
BRF1-222ENST00000635152 ZCCHC11Q5TAX3 1644 aaKnown RBP17.71■□□□□ 0.43
BRF1-222ENST00000635152 SPAG9O60271 1321 aaKnown RBP17.71■□□□□ 0.43
BRF1-222ENST00000635152 DUOX2Q9NRD8 1548 aa17.71■□□□□ 0.43
BRF1-222ENST00000635152 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.42
BRF1-222ENST00000635152 SALL2Q9Y467 1007 aaPredicted RBP17.7■□□□□ 0.42
BRF1-222ENST00000635152 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
BRF1-222ENST00000635152 PLXNC1O60486 1568 aa17.69■□□□□ 0.42
BRF1-222ENST00000635152 RALBP1Q15311 655 aa17.69■□□□□ 0.42
BRF1-222ENST00000635152 NUDCQ9Y266 331 aa17.69■□□□□ 0.42
BRF1-222ENST00000635152 CC2D1BQ5T0F9 858 aaKnown RBP17.68■□□□□ 0.42
BRF1-222ENST00000635152 ERBINQ96RT1 1412 aa17.68■□□□□ 0.42
BRF1-222ENST00000635152 TRPM1Q7Z4N2 1603 aa17.68■□□□□ 0.42
BRF1-222ENST00000635152 DISP3Q9P2K9 1392 aa17.67■□□□□ 0.42
BRF1-222ENST00000635152 IQGAP3Q86VI3 1631 aa17.67■□□□□ 0.42
BRF1-222ENST00000635152 TESK2Q96S53 571 aa17.67■□□□□ 0.42
BRF1-222ENST00000635152 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
BRF1-222ENST00000635152 SMG6Q86US8 1419 aaKnown RBP17.66■□□□□ 0.42
BRF1-222ENST00000635152 GPRASP1Q5JY77 1395 aa17.65■□□□□ 0.42
BRF1-222ENST00000635152 ABCC1P33527 1531 aa17.65■□□□□ 0.42
BRF1-222ENST00000635152 BRD4O60885 1362 aaPredicted RBP17.65■□□□□ 0.42
BRF1-222ENST00000635152 KTN1Q86UP2 1357 aaKnown RBP17.65■□□□□ 0.42
BRF1-222ENST00000635152 UHRF1BP1LA0JNW5 1464 aa17.65■□□□□ 0.42
BRF1-222ENST00000635152 PER1O15534 1290 aaPredicted RBP17.64■□□□□ 0.41
BRF1-222ENST00000635152 PANK3Q9H999 370 aa17.64■□□□□ 0.41
BRF1-222ENST00000635152 TMF1P82094 1093 aa17.62■□□□□ 0.41
BRF1-222ENST00000635152 NLRP13Q86W25 1043 aa17.62■□□□□ 0.41
BRF1-222ENST00000635152 MAGI2Q86UL8 1455 aa17.62■□□□□ 0.41
BRF1-222ENST00000635152 KIF3BO15066 747 aa17.61■□□□□ 0.41
BRF1-222ENST00000635152 LRPPRCP42704 1394 aaKnown RBP17.6■□□□□ 0.41
BRF1-222ENST00000635152 ATP10AO60312 1499 aa17.6■□□□□ 0.41
BRF1-222ENST00000635152 PARD3Q8TEW0 1356 aa17.59■□□□□ 0.41
BRF1-222ENST00000635152 COL17A1Q9UMD9 1497 aaPredicted RBP17.59■□□□□ 0.41
BRF1-222ENST00000635152 ANP32EQ9BTT0 268 aa17.59■□□□□ 0.41
BRF1-222ENST00000635152 PRDM15P57071 1507 aaPredicted RBP17.58■□□□□ 0.4
BRF1-222ENST00000635152 SCAPERQ9BY12 1400 aa17.57■□□□□ 0.4
BRF1-222ENST00000635152 E9PCH4 1651 aa17.57■□□□□ 0.4
BRF1-222ENST00000635152 FANCAO15360 1455 aa17.56■□□□□ 0.4
BRF1-222ENST00000635152 WDR7Q9Y4E6 1490 aa17.56■□□□□ 0.4
BRF1-222ENST00000635152 ZFYVE16Q7Z3T8 1539 aa17.55■□□□□ 0.4
BRF1-222ENST00000635152 RTEL1-TNFRSF6BF6WH68 1400 aa17.55■□□□□ 0.4
BRF1-222ENST00000635152 CCDC136Q96JN2 1154 aa17.54■□□□□ 0.4
BRF1-222ENST00000635152 EIF2AK4Q9P2K8 1649 aaKnown RBP17.54■□□□□ 0.4
BRF1-222ENST00000635152 RNF123Q5XPI4 1314 aa17.53■□□□□ 0.4
BRF1-222ENST00000635152 KANK1Q14678 1352 aa17.52■□□□□ 0.4
BRF1-222ENST00000635152 ADGRL1O94910 1474 aa17.51■□□□□ 0.39
BRF1-222ENST00000635152 MSH5O43196 834 aa17.51■□□□□ 0.39
BRF1-222ENST00000635152 CDCA7LQ96GN5 454 aa17.51■□□□□ 0.39
BRF1-222ENST00000635152 KNSTRNQ9Y448 316 aa17.5■□□□□ 0.39
BRF1-222ENST00000635152 WASHC2CQ9Y4E1 1318 aa17.5■□□□□ 0.39
BRF1-222ENST00000635152 ATP7AQ04656 1500 aa17.49■□□□□ 0.39
BRF1-222ENST00000635152 LAMC1P11047 1609 aa17.49■□□□□ 0.39
BRF1-222ENST00000635152 ASXL2Q76L83 1435 aa17.48■□□□□ 0.39
BRF1-222ENST00000635152 TRPM2O94759 1503 aa17.48■□□□□ 0.39
BRF1-222ENST00000635152 PTPRTO14522 1441 aa17.47■□□□□ 0.39
BRF1-222ENST00000635152 ARAP3Q8WWN8 1544 aa17.47■□□□□ 0.39
BRF1-222ENST00000635152 RCAN3Q9UKA8 241 aa17.47■□□□□ 0.39
BRF1-222ENST00000635152 CFAP70Q5T0N1 1121 aa17.47■□□□□ 0.39
BRF1-222ENST00000635152 CLTCL1P53675 1640 aa17.46■□□□□ 0.39
BRF1-222ENST00000635152 MADDQ8WXG6 1647 aa17.46■□□□□ 0.39
BRF1-222ENST00000635152 CHGAP10645 457 aaKnown RBP17.46■□□□□ 0.38
BRF1-222ENST00000635152 RRP1P56182 461 aaKnown RBP17.46■□□□□ 0.38
BRF1-222ENST00000635152 NPM1P06748 294 aaKnown RBP eCLIP17.45■□□□□ 0.38
BRF1-222ENST00000635152 UGGT1Q9NYU2 1555 aa17.44■□□□□ 0.38
BRF1-222ENST00000635152 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
BRF1-222ENST00000635152 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
BRF1-222ENST00000635152 ADGRF5Q8IZF2 1346 aa17.44■□□□□ 0.38
BRF1-222ENST00000635152 RNF17Q9BXT8 1623 aaKnown RBP17.44■□□□□ 0.38
BRF1-222ENST00000635152 SCAF11Q99590 1463 aaKnown RBP17.43■□□□□ 0.38
BRF1-222ENST00000635152 SPHKAPQ2M3C7 1700 aa17.43■□□□□ 0.38
BRF1-222ENST00000635152 ABCA9Q8IUA7 1624 aa17.43■□□□□ 0.38
BRF1-222ENST00000635152 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
BRF1-222ENST00000635152 EXOC6Q8TAG9 804 aa17.43■□□□□ 0.38
BRF1-222ENST00000635152 GGT6Q6P531 493 aa17.42■□□□□ 0.38
BRF1-222ENST00000635152 INO80Q9ULG1 1556 aaPredicted RBP17.42■□□□□ 0.38
BRF1-222ENST00000635152 PPP2R1AP30153 589 aa17.42■□□□□ 0.38
BRF1-222ENST00000635152 PDE3BQ13370 1112 aa17.42■□□□□ 0.38
BRF1-222ENST00000635152 AMER1Q5JTC6 1135 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms