RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 MSNP26038 577 aaKnown RBP2.43□□□□□ -2.02
TCF4-264ENST00000628391 IRX5P78411 483 aaPredicted RBP2.43□□□□□ -2.02
TCF4-264ENST00000628391 BECN1Q14457 450 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 CSPP1Q1MSJ5 1256 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 NBPF1Q3BBV0 1214 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 NBPF20Q3BBV1 942 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 HS1BP3Q53T59 392 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 SASS6Q6UVJ0 657 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.43□□□□□ -2.02
TCF4-264ENST00000628391 PLCD4Q9BRC7 762 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 POLR3GLQ9BT43 218 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 PANK2Q9BZ23 570 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 GRPEL1Q9HAV7 217 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 FAM13BQ9NYF5 915 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 CGNQ9P2M7 1197 aaKnown RBP2.43□□□□□ -2.02
TCF4-264ENST00000628391 KCNG1Q9UIX4 513 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 ROCK2O75116 1388 aaKnown RBP2.43□□□□□ -2.02
TCF4-264ENST00000628391 CCNB3Q8WWL7 1395 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 RAB3GAP2Q9H2M9 1393 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 UHRF1BP1LA0JNW5 1464 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 NLRP1Q9C000 1473 aa2.43□□□□□ -2.02
TCF4-264ENST00000628391 KIAA1107Q9UPP5 1409 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 MAP3K1Q13233 1512 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 SHROOM2Q13796 1616 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 PLEKHH2Q8IVE3 1493 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 ARAP1Q96P48 1450 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 ZMYM3Q14202 1370 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 DDX11L8A8MPP1 907 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 SOX12O15370 315 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 ZNF500O60304 480 aaPredicted RBP2.42□□□□□ -2.02
TCF4-264ENST00000628391 MYCNP04198 464 aaPredicted RBP2.42□□□□□ -2.02
TCF4-264ENST00000628391 SETQ01105 290 aaPredicted RBP2.42□□□□□ -2.02
TCF4-264ENST00000628391 GABPB1Q06547 395 aaPredicted RBP2.42□□□□□ -2.02
TCF4-264ENST00000628391 MAPK8IP2Q13387 824 aaPredicted RBP2.42□□□□□ -2.02
TCF4-264ENST00000628391 FAM161AQ3B820 660 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 CREBRFQ8IUR6 639 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 TMC1Q8TDI8 760 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 PPP1R9BQ96SB3 815 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 SIN3AQ96ST3 1273 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 EFCC1Q9HA90 598 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 SLC52A1Q9NWF4 448 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 TOP2AP11388 1531 aaKnown RBP2.42□□□□□ -2.02
TCF4-264ENST00000628391 NCOA1Q15788 1441 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 SETD5Q9C0A6 1442 aa2.42□□□□□ -2.02
TCF4-264ENST00000628391 TIAM1Q13009 1591 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 TONSLQ96HA7 1378 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 PATL2C9JE40 543 aaKnown RBP2.41□□□□□ -2.02
TCF4-264ENST00000628391 MCM5P33992 734 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 MFAP1P55081 439 aaKnown RBP2.41□□□□□ -2.02
TCF4-264ENST00000628391 RRP1P56182 461 aaKnown RBP2.41□□□□□ -2.02
TCF4-264ENST00000628391 TPRNQ4KMQ1 711 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 CTR9Q6PD62 1173 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 TMED8Q6PL24 325 aaPredicted RBP2.41□□□□□ -2.02
TCF4-264ENST00000628391 AEBP1Q8IUX7 1158 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 EGFL6Q8IUX8 553 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 CARD10Q9BWT7 1032 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 R3HCC1Q9Y3T6 440 aaKnown RBP2.41□□□□□ -2.02
TCF4-264ENST00000628391 KIF3AQ9Y496 699 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 SOGA1O94964 1423 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 YEATS2Q9ULM3 1422 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 E9PCH4 1651 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 WIZO95785 1651 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 GCC2Q8IWJ2 1684 aa2.41□□□□□ -2.02
TCF4-264ENST00000628391 E9PSI1 815 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 TULP2O00295 520 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 GTF2F1P35269 517 aaKnown RBP eCLIP2.4□□□□□ -2.03
TCF4-264ENST00000628391 RBM25P49756 843 aaKnown RBP2.4□□□□□ -2.03
TCF4-264ENST00000628391 HMGN5P82970 282 aaKnown RBP2.4□□□□□ -2.03
TCF4-264ENST00000628391 SATB1Q01826 763 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 C8orf34Q49A92 452 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 HSP90AB3PQ58FF7 597 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 NGEFQ8N5V2 710 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 PRIMPOLQ96LW4 560 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 TIGD1Q96MW7 591 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 MYCBPQ99417 103 aaPredicted RBP2.4□□□□□ -2.03
TCF4-264ENST00000628391 ANTXR1Q9H6X2 564 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 BRMS1Q9HCU9 246 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 MRS2Q9HD23 443 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 CALCOCO1Q9P1Z2 691 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 NOL7Q9UMY1 257 aaKnown RBP2.4□□□□□ -2.03
TCF4-264ENST00000628391 ARHGAP31Q2M1Z3 1444 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 NCOA3Q9Y6Q9 1424 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 KIF21AQ7Z4S6 1674 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 KDM2BQ8NHM5 1336 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 KIF16BQ96L93 1317 aa2.4□□□□□ -2.03
TCF4-264ENST00000628391 PTPN23Q9H3S7 1636 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 INSRP06213 1382 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 EIF3AQ14152 1382 aaKnown RBP2.39□□□□□ -2.03
TCF4-264ENST00000628391 CLASP1Q7Z460 1538 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 TRIM6-TRIM34B2RNG4 842 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 ZBTB22O15209 634 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 TRAK2O60296 914 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 HSP90AB1P08238 724 aaKnown RBP2.39□□□□□ -2.03
TCF4-264ENST00000628391 MCM4P33991 863 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 KCNJ4P48050 445 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 SLC4A3P48751 1232 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 NBPF9Q3BBW0 867 aa2.39□□□□□ -2.03
TCF4-264ENST00000628391 CENPQQ7L2Z9 268 aaPredicted RBP2.39□□□□□ -2.03
TCF4-264ENST00000628391 ZNF771Q7L3S4 317 aaPredicted RBP2.39□□□□□ -2.03
TCF4-264ENST00000628391 NBPF11Q86T75 865 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms