RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 TSPY4P0CV99 314 aa20.63■□□□□ 0.89
LINC00552-201ENST00000625151 TSPY10P0CW01 314 aa20.63■□□□□ 0.89
LINC00552-201ENST00000625151 PNISRQ8TF01 805 aaKnown RBP20.62■□□□□ 0.89
LINC00552-201ENST00000625151 KDM2AQ9Y2K7 1162 aa20.62■□□□□ 0.89
LINC00552-201ENST00000625151 ARHGEF5Q12774 1597 aa20.62■□□□□ 0.89
LINC00552-201ENST00000625151 SENP3-EIF4A1A0A087X0R7 540 aa20.62■□□□□ 0.89
LINC00552-201ENST00000625151 HNRNPMP52272 730 aaKnown RBP eCLIP20.61■□□□□ 0.89
LINC00552-201ENST00000625151 E9PCH4 1651 aa20.61■□□□□ 0.89
LINC00552-201ENST00000625151 ST20-MTHFSA0A0A6YYL1 179 aa20.6■□□□□ 0.89
LINC00552-201ENST00000625151 RNF123Q5XPI4 1314 aa20.6■□□□□ 0.89
LINC00552-201ENST00000625151 CDC42BPBQ9Y5S2 1711 aa20.59■□□□□ 0.89
LINC00552-201ENST00000625151 DCAF11Q8TEB1 546 aa20.59■□□□□ 0.89
LINC00552-201ENST00000625151 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.89
LINC00552-201ENST00000625151 TMC1Q8TDI8 760 aa20.58■□□□□ 0.89
LINC00552-201ENST00000625151 SAMD9LQ8IVG5 1584 aa20.57■□□□□ 0.88
LINC00552-201ENST00000625151 RIMBP3CA6NJZ7 1639 aa20.57■□□□□ 0.88
LINC00552-201ENST00000625151 RIMBP3BA6NNM3 1639 aa20.57■□□□□ 0.88
LINC00552-201ENST00000625151 RIMBP3Q9UFD9 1639 aa20.57■□□□□ 0.88
LINC00552-201ENST00000625151 FAM135AQ9P2D6 1515 aa20.56■□□□□ 0.88
LINC00552-201ENST00000625151 ASXL2Q76L83 1435 aa20.56■□□□□ 0.88
LINC00552-201ENST00000625151 PREX2Q70Z35 1606 aa20.56■□□□□ 0.88
LINC00552-201ENST00000625151 WDR7Q9Y4E6 1490 aa20.55■□□□□ 0.88
LINC00552-201ENST00000625151 ERICH6Q7L0X2 663 aa20.54■□□□□ 0.88
LINC00552-201ENST00000625151 LRPPRCP42704 1394 aaKnown RBP20.54■□□□□ 0.88
LINC00552-201ENST00000625151 CCDC141Q6ZP82 1450 aa20.54■□□□□ 0.88
LINC00552-201ENST00000625151 TRPM1Q7Z4N2 1603 aa20.53■□□□□ 0.88
LINC00552-201ENST00000625151 MYBBP1AQ9BQG0 1328 aaKnown RBP20.52■□□□□ 0.87
LINC00552-201ENST00000625151 BRD4O60885 1362 aaPredicted RBP20.51■□□□□ 0.87
LINC00552-201ENST00000625151 ARHGAP5Q13017 1502 aa20.51■□□□□ 0.87
LINC00552-201ENST00000625151 NPM1P06748 294 aaKnown RBP eCLIP20.5■□□□□ 0.87
LINC00552-201ENST00000625151 MYO5CQ9NQX4 1742 aa20.49■□□□□ 0.87
LINC00552-201ENST00000625151 KTN1Q86UP2 1357 aaKnown RBP20.49■□□□□ 0.87
LINC00552-201ENST00000625151 PRAG1Q86YV5 1406 aa20.49■□□□□ 0.87
LINC00552-201ENST00000625151 RALBP1Q15311 655 aa20.49■□□□□ 0.87
LINC00552-201ENST00000625151 CCDC136Q96JN2 1154 aa20.48■□□□□ 0.87
LINC00552-201ENST00000625151 PLCH2O75038 1416 aa20.48■□□□□ 0.87
LINC00552-201ENST00000625151 CCDC144AA2RUR9 1427 aa20.47■□□□□ 0.87
LINC00552-201ENST00000625151 SYCP2Q9BX26 1530 aa20.47■□□□□ 0.87
LINC00552-201ENST00000625151 UNC13BO14795 1591 aa20.46■□□□□ 0.87
LINC00552-201ENST00000625151 PLA2R1Q13018 1463 aa20.44■□□□□ 0.86
LINC00552-201ENST00000625151 NBPF1Q3BBV0 1214 aa20.43■□□□□ 0.86
LINC00552-201ENST00000625151 RGL3Q3MIN7 710 aa20.43■□□□□ 0.86
LINC00552-201ENST00000625151 MAST1Q9Y2H9 1570 aa20.43■□□□□ 0.86
LINC00552-201ENST00000625151 PARD3Q8TEW0 1356 aa20.42■□□□□ 0.86
LINC00552-201ENST00000625151 A2MP01023 1474 aa20.42■□□□□ 0.86
LINC00552-201ENST00000625151 RSPH4AQ5TD94 716 aa20.42■□□□□ 0.86
LINC00552-201ENST00000625151 ABCA9Q8IUA7 1624 aa20.41■□□□□ 0.86
LINC00552-201ENST00000625151 EFCAB2Q5VUJ9 269 aa20.4■□□□□ 0.86
LINC00552-201ENST00000625151 GPRASP1Q5JY77 1395 aa20.39■□□□□ 0.86
LINC00552-201ENST00000625151 LAMC1P11047 1609 aa20.39■□□□□ 0.86
LINC00552-201ENST00000625151 NLRP13Q86W25 1043 aa20.39■□□□□ 0.85
LINC00552-201ENST00000625151 IQGAP3Q86VI3 1631 aa20.39■□□□□ 0.85
LINC00552-201ENST00000625151 PRDM15P57071 1507 aaPredicted RBP20.39■□□□□ 0.85
LINC00552-201ENST00000625151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.85
LINC00552-201ENST00000625151 COL17A1Q9UMD9 1497 aaPredicted RBP20.38■□□□□ 0.85
LINC00552-201ENST00000625151 PER1O15534 1290 aaPredicted RBP20.38■□□□□ 0.85
LINC00552-201ENST00000625151 SALL2Q9Y467 1007 aaPredicted RBP20.37■□□□□ 0.85
LINC00552-201ENST00000625151 PLXNC1O60486 1568 aa20.37■□□□□ 0.85
LINC00552-201ENST00000625151 RRP1P56182 461 aaKnown RBP20.37■□□□□ 0.85
LINC00552-201ENST00000625151 DISP3Q9P2K9 1392 aa20.36■□□□□ 0.85
LINC00552-201ENST00000625151 PLEKHH2Q8IVE3 1493 aa20.36■□□□□ 0.85
LINC00552-201ENST00000625151 TRAPPC8Q9Y2L5 1435 aa20.35■□□□□ 0.85
LINC00552-201ENST00000625151 TESK2Q96S53 571 aa20.34■□□□□ 0.85
LINC00552-201ENST00000625151 NOP58Q9Y2X3 529 aaKnown RBP20.34■□□□□ 0.85
LINC00552-201ENST00000625151 ABCC1P33527 1531 aa20.34■□□□□ 0.85
LINC00552-201ENST00000625151 FANCAO15360 1455 aa20.33■□□□□ 0.85
LINC00552-201ENST00000625151 EIF2AK4Q9P2K8 1649 aaKnown RBP20.33■□□□□ 0.85
LINC00552-201ENST00000625151 RCAN3Q9UKA8 241 aa20.33■□□□□ 0.84
LINC00552-201ENST00000625151 PAK3O75914 559 aaPredicted RBP20.32■□□□□ 0.84
LINC00552-201ENST00000625151 AFAP1Q8N556 730 aa20.32■□□□□ 0.84
LINC00552-201ENST00000625151 EXOC6Q8TAG9 804 aa20.32■□□□□ 0.84
LINC00552-201ENST00000625151 ARAP3Q8WWN8 1544 aa20.31■□□□□ 0.84
LINC00552-201ENST00000625151 CC2D1BQ5T0F9 858 aaKnown RBP20.3■□□□□ 0.84
LINC00552-201ENST00000625151 ERBINQ96RT1 1412 aa20.3■□□□□ 0.84
LINC00552-201ENST00000625151 CD109Q6YHK3 1445 aa20.3■□□□□ 0.84
LINC00552-201ENST00000625151 MAGI2Q86UL8 1455 aa20.29■□□□□ 0.84
LINC00552-201ENST00000625151 DUOX2Q9NRD8 1548 aa20.29■□□□□ 0.84
LINC00552-201ENST00000625151 PDE3BQ13370 1112 aa20.29■□□□□ 0.84
LINC00552-201ENST00000625151 ATP10AO60312 1499 aa20.28■□□□□ 0.84
LINC00552-201ENST00000625151 CDCA7LQ96GN5 454 aa20.28■□□□□ 0.84
LINC00552-201ENST00000625151 PANK3Q9H999 370 aa20.28■□□□□ 0.84
LINC00552-201ENST00000625151 RNF17Q9BXT8 1623 aaKnown RBP20.28■□□□□ 0.84
LINC00552-201ENST00000625151 WASHC2CQ9Y4E1 1318 aa20.27■□□□□ 0.84
LINC00552-201ENST00000625151 BLMP54132 1417 aaPredicted RBP20.26■□□□□ 0.83
LINC00552-201ENST00000625151 ANP32AP39687 249 aaKnown RBP20.25■□□□□ 0.83
LINC00552-201ENST00000625151 SCAPERQ9BY12 1400 aa20.25■□□□□ 0.83
LINC00552-201ENST00000625151 IPO9Q96P70 1041 aaKnown RBP20.24■□□□□ 0.83
LINC00552-201ENST00000625151 ADGRL1O94910 1474 aa20.24■□□□□ 0.83
LINC00552-201ENST00000625151 TMF1P82094 1093 aa20.23■□□□□ 0.83
LINC00552-201ENST00000625151 ZMYM4Q5VZL5 1548 aa20.22■□□□□ 0.83
LINC00552-201ENST00000625151 INSRP06213 1382 aa20.22■□□□□ 0.83
LINC00552-201ENST00000625151 MYT1LQ9UL68 1186 aa20.21■□□□□ 0.83
LINC00552-201ENST00000625151 SPAG9O60271 1321 aaKnown RBP20.2■□□□□ 0.82
LINC00552-201ENST00000625151 FAM69CQ0P6D2 419 aa20.2■□□□□ 0.82
LINC00552-201ENST00000625151 MADDQ8WXG6 1647 aa20.19■□□□□ 0.82
LINC00552-201ENST00000625151 NBR1Q14596 966 aa20.19■□□□□ 0.82
LINC00552-201ENST00000625151 IQGAP1P46940 1657 aa20.18■□□□□ 0.82
LINC00552-201ENST00000625151 PLIN1O60240 522 aa20.18■□□□□ 0.82
LINC00552-201ENST00000625151 MAP3K4Q9Y6R4 1608 aa20.17■□□□□ 0.82
LINC00552-201ENST00000625151 ZFYVE16Q7Z3T8 1539 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms