RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
AP000542.3-201ENST00000623391 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
AP000542.3-201ENST00000623391 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
AP000542.3-201ENST00000623391 NOP58Q9Y2X3 529 aaKnown RBP11.29□□□□□ -0.6
AP000542.3-201ENST00000623391 A0A0G2JS52 829 aa11.28□□□□□ -0.6
AP000542.3-201ENST00000623391 U2AF1L5P0DN76 240 aaPredicted RBP11.28□□□□□ -0.6
AP000542.3-201ENST00000623391 U2AF1Q01081 240 aaKnown RBP eCLIP11.28□□□□□ -0.6
AP000542.3-201ENST00000623391 SCAPERQ9BY12 1400 aa11.28□□□□□ -0.6
AP000542.3-201ENST00000623391 NESP48681 1621 aa11.28□□□□□ -0.6
AP000542.3-201ENST00000623391 HSCBQ8IWL3 235 aa11.27□□□□□ -0.6
AP000542.3-201ENST00000623391 ZRSR1Q15695 479 aaKnown RBP11.27□□□□□ -0.61
AP000542.3-201ENST00000623391 MAGI1Q96QZ7 1491 aaPredicted RBP11.27□□□□□ -0.61
AP000542.3-201ENST00000623391 HSP90AB1P08238 724 aaKnown RBP11.26□□□□□ -0.61
AP000542.3-201ENST00000623391 TRIM44Q96DX7 344 aaPredicted RBP11.26□□□□□ -0.61
AP000542.3-201ENST00000623391 ROCK1Q13464 1354 aa11.25□□□□□ -0.61
AP000542.3-201ENST00000623391 SAFB2Q14151 953 aaKnown RBP eCLIP11.25□□□□□ -0.61
AP000542.3-201ENST00000623391 GLIPR1L2Q4G1C9 344 aa11.25□□□□□ -0.61
AP000542.3-201ENST00000623391 UNC13AQ9UPW8 1703 aa11.25□□□□□ -0.61
AP000542.3-201ENST00000623391 RGS3P49796 1198 aa11.25□□□□□ -0.61
AP000542.3-201ENST00000623391 CNTLNQ9NXG0 1405 aa11.24□□□□□ -0.61
AP000542.3-201ENST00000623391 ZBED9Q6R2W3 1325 aa11.24□□□□□ -0.61
AP000542.3-201ENST00000623391 HMMRO75330 724 aa11.23□□□□□ -0.61
AP000542.3-201ENST00000623391 STK31Q9BXU1 1019 aa11.23□□□□□ -0.61
AP000542.3-201ENST00000623391 C9orf84Q5VXU9 1444 aa11.23□□□□□ -0.61
AP000542.3-201ENST00000623391 CDK11BP21127 795 aaKnown RBP11.23□□□□□ -0.61
AP000542.3-201ENST00000623391 CENPJQ9HC77 1338 aaPredicted RBP11.23□□□□□ -0.61
AP000542.3-201ENST00000623391 ST20-MTHFSA0A0A6YYL1 179 aa11.23□□□□□ -0.61
AP000542.3-201ENST00000623391 B4GALNT3Q6L9W6 998 aa11.22□□□□□ -0.61
AP000542.3-201ENST00000623391 KIAA1107Q9UPP5 1409 aa11.22□□□□□ -0.61
AP000542.3-201ENST00000623391 THOC2Q8NI27 1593 aaKnown RBP11.22□□□□□ -0.61
AP000542.3-201ENST00000623391 GOLGA6L6A8MZA4 724 aa11.22□□□□□ -0.61
AP000542.3-201ENST00000623391 E9PSI1 815 aa11.21□□□□□ -0.61
AP000542.3-201ENST00000623391 PANK3Q9H999 370 aa11.21□□□□□ -0.61
AP000542.3-201ENST00000623391 CCDC7Q96M83 1385 aa11.21□□□□□ -0.61
AP000542.3-201ENST00000623391 PRKRIP1Q9H875 184 aaPredicted RBP11.21□□□□□ -0.61
AP000542.3-201ENST00000623391 DAPK1P53355 1430 aa11.21□□□□□ -0.62
AP000542.3-201ENST00000623391 GPATCH3Q96I76 525 aa11.21□□□□□ -0.62
AP000542.3-201ENST00000623391 PLEKHG5O94827 1062 aa11.2□□□□□ -0.62
AP000542.3-201ENST00000623391 EPRSP07814 1512 aaKnown RBP11.2□□□□□ -0.62
AP000542.3-201ENST00000623391 KIF14Q15058 1648 aa11.2□□□□□ -0.62
AP000542.3-201ENST00000623391 AAMPQ13685 434 aa11.2□□□□□ -0.62
AP000542.3-201ENST00000623391 ARXQ96QS3 562 aa11.2□□□□□ -0.62
AP000542.3-201ENST00000623391 NGDNQ8NEJ9 315 aaKnown RBP11.2□□□□□ -0.62
AP000542.3-201ENST00000623391 PCF11O94913 1555 aaKnown RBP11.2□□□□□ -0.62
AP000542.3-201ENST00000623391 KCNJ4P48050 445 aa11.2□□□□□ -0.62
AP000542.3-201ENST00000623391 ITPRIPQ8IWB1 547 aa11.19□□□□□ -0.62
AP000542.3-201ENST00000623391 COG3Q96JB2 828 aa11.19□□□□□ -0.62
AP000542.3-201ENST00000623391 WASHC2AQ641Q2 1341 aa11.19□□□□□ -0.62
AP000542.3-201ENST00000623391 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
AP000542.3-201ENST00000623391 L1TD1Q5T7N2 865 aaKnown RBP11.18□□□□□ -0.62
AP000542.3-201ENST00000623391 TRAK1Q9UPV9 953 aa11.18□□□□□ -0.62
AP000542.3-201ENST00000623391 SMC4Q9NTJ3 1288 aa11.18□□□□□ -0.62
AP000542.3-201ENST00000623391 BRD4O60885 1362 aaPredicted RBP11.17□□□□□ -0.62
AP000542.3-201ENST00000623391 NPHP1O15259 732 aa11.17□□□□□ -0.62
AP000542.3-201ENST00000623391 CSB-PGBD3P0DP91 1061 aa11.17□□□□□ -0.62
AP000542.3-201ENST00000623391 AMPHP49418 695 aa11.17□□□□□ -0.62
AP000542.3-201ENST00000623391 FGD1P98174 961 aa11.17□□□□□ -0.62
AP000542.3-201ENST00000623391 KIAA1211Q6ZU35 1233 aa11.17□□□□□ -0.62
AP000542.3-201ENST00000623391 GRIN2AQ12879 1464 aa11.16□□□□□ -0.62
AP000542.3-201ENST00000623391 RPGRIP1LQ68CZ1 1315 aa11.16□□□□□ -0.62
AP000542.3-201ENST00000623391 CENPQQ7L2Z9 268 aaPredicted RBP11.15□□□□□ -0.62
AP000542.3-201ENST00000623391 PTMAP06454 111 aaKnown RBP11.15□□□□□ -0.62
AP000542.3-201ENST00000623391 CCDC141Q6ZP82 1450 aa11.15□□□□□ -0.62
AP000542.3-201ENST00000623391 PTPN23Q9H3S7 1636 aa11.15□□□□□ -0.62
AP000542.3-201ENST00000623391 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
AP000542.3-201ENST00000623391 NRDCO43847 1150 aa11.14□□□□□ -0.63
AP000542.3-201ENST00000623391 GBP4Q96PP9 640 aa11.14□□□□□ -0.63
AP000542.3-201ENST00000623391 ZNF644Q9H582 1327 aaPredicted RBP11.13□□□□□ -0.63
AP000542.3-201ENST00000623391 SOX12O15370 315 aa11.13□□□□□ -0.63
AP000542.3-201ENST00000623391 FAM69CQ0P6D2 419 aa11.13□□□□□ -0.63
AP000542.3-201ENST00000623391 CHMP4CQ96CF2 233 aa11.12□□□□□ -0.63
AP000542.3-201ENST00000623391 KIF7Q2M1P5 1343 aa11.12□□□□□ -0.63
AP000542.3-201ENST00000623391 CYB5RLQ6IPT4 315 aa11.12□□□□□ -0.63
AP000542.3-201ENST00000623391 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
AP000542.3-201ENST00000623391 GOLGA6L4A6NEF3 574 aa11.11□□□□□ -0.63
AP000542.3-201ENST00000623391 DIAPH1O60610 1272 aaKnown RBP11.11□□□□□ -0.63
AP000542.3-201ENST00000623391 RRP1P56182 461 aaKnown RBP11.11□□□□□ -0.63
AP000542.3-201ENST00000623391 ZKSCAN2Q63HK3 967 aa11.11□□□□□ -0.63
AP000542.3-201ENST00000623391 RUNDC1Q96C34 613 aa11.11□□□□□ -0.63
AP000542.3-201ENST00000623391 CAMSAP2Q08AD1 1489 aa11.11□□□□□ -0.63
AP000542.3-201ENST00000623391 RBM19Q9Y4C8 960 aaKnown RBP11.11□□□□□ -0.63
AP000542.3-201ENST00000623391 URB2Q14146 1524 aaKnown RBP11.1□□□□□ -0.63
AP000542.3-201ENST00000623391 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
AP000542.3-201ENST00000623391 CCDC146Q8IYE0 955 aa11.1□□□□□ -0.63
AP000542.3-201ENST00000623391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.09□□□□□ -0.63
AP000542.3-201ENST00000623391 ANKRD30BQ9BXX2 1392 aa11.09□□□□□ -0.63
AP000542.3-201ENST00000623391 C1orf141Q5JVX7 400 aa11.09□□□□□ -0.63
AP000542.3-201ENST00000623391 SYAP1Q96A49 352 aaPredicted RBP11.08□□□□□ -0.63
AP000542.3-201ENST00000623391 POGZQ7Z3K3 1410 aa11.08□□□□□ -0.64
AP000542.3-201ENST00000623391 AKNAQ7Z591 1439 aa11.08□□□□□ -0.64
AP000542.3-201ENST00000623391 NUTM2DQ5VT03 806 aaPredicted RBP11.08□□□□□ -0.64
AP000542.3-201ENST00000623391 CDK13Q14004 1512 aaKnown RBP11.08□□□□□ -0.64
AP000542.3-201ENST00000623391 API5Q9BZZ5 524 aaKnown RBP11.08□□□□□ -0.64
AP000542.3-201ENST00000623391 SLC52A1Q9NWF4 448 aa11.08□□□□□ -0.64
AP000542.3-201ENST00000623391 DDX19BQ9UMR2 479 aa11.07□□□□□ -0.64
AP000542.3-201ENST00000623391 CTTNBP2Q8WZ74 1663 aa11.07□□□□□ -0.64
AP000542.3-201ENST00000623391 ITSN2Q9NZM3 1697 aa11.07□□□□□ -0.64
AP000542.3-201ENST00000623391 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
AP000542.3-201ENST00000623391 NINLQ9Y2I6 1382 aa11.06□□□□□ -0.64
AP000542.3-201ENST00000623391 TMX4Q9H1E5 349 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms