RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 CEP170Q5SW79 1584 aa9.89□□□□□ -0.83
TRIM49B-202ENST00000622138 A0A0U1RQG5 324 aaPredicted RBP9.89□□□□□ -0.83
TRIM49B-202ENST00000622138 ITSN2Q9NZM3 1697 aa9.89□□□□□ -0.83
TRIM49B-202ENST00000622138 DHX29Q7Z478 1369 aaKnown RBP9.89□□□□□ -0.83
TRIM49B-202ENST00000622138 ADCY10Q96PN6 1610 aa9.88□□□□□ -0.83
TRIM49B-202ENST00000622138 MS4A1P11836 297 aa9.88□□□□□ -0.83
TRIM49B-202ENST00000622138 PDIA4P13667 645 aaKnown RBP9.88□□□□□ -0.83
TRIM49B-202ENST00000622138 KIAA1107Q9UPP5 1409 aa9.88□□□□□ -0.83
TRIM49B-202ENST00000622138 ADGRL2O95490 1459 aa9.88□□□□□ -0.83
TRIM49B-202ENST00000622138 RRAGDQ9NQL2 400 aaPredicted RBP9.87□□□□□ -0.83
TRIM49B-202ENST00000622138 KDM5CP41229 1560 aa9.86□□□□□ -0.83
TRIM49B-202ENST00000622138 USP47Q96K76 1375 aa9.86□□□□□ -0.83
TRIM49B-202ENST00000622138 NAP1L5Q96NT1 182 aaPredicted RBP9.86□□□□□ -0.83
TRIM49B-202ENST00000622138 CFDP1Q9UEE9 299 aaPredicted RBP9.86□□□□□ -0.83
TRIM49B-202ENST00000622138 CNGB1Q14028 1251 aaPredicted RBP9.85□□□□□ -0.83
TRIM49B-202ENST00000622138 NPM2Q86SE8 214 aaKnown RBP9.85□□□□□ -0.83
TRIM49B-202ENST00000622138 DCAF11Q8TEB1 546 aa9.85□□□□□ -0.83
TRIM49B-202ENST00000622138 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
TRIM49B-202ENST00000622138 CDC42BPAQ5VT25 1732 aa9.85□□□□□ -0.83
TRIM49B-202ENST00000622138 CLCN1P35523 988 aa9.85□□□□□ -0.83
TRIM49B-202ENST00000622138 ZNF326Q5BKZ1 582 aaKnown RBP9.85□□□□□ -0.83
TRIM49B-202ENST00000622138 PNNQ9H307 717 aaKnown RBP9.85□□□□□ -0.83
TRIM49B-202ENST00000622138 PKD2Q13563 968 aa9.84□□□□□ -0.83
TRIM49B-202ENST00000622138 L1TD1Q5T7N2 865 aaKnown RBP9.84□□□□□ -0.83
TRIM49B-202ENST00000622138 BACH2Q9BYV9 841 aa9.84□□□□□ -0.83
TRIM49B-202ENST00000622138 PDE4AP27815 886 aa9.83□□□□□ -0.84
TRIM49B-202ENST00000622138 SENP3-EIF4A1A0A087X0R7 540 aa9.82□□□□□ -0.84
TRIM49B-202ENST00000622138 POLR3GLQ9BT43 218 aa9.82□□□□□ -0.84
TRIM49B-202ENST00000622138 PRDM4Q9UKN5 801 aa9.82□□□□□ -0.84
TRIM49B-202ENST00000622138 ANKRD50Q9ULJ7 1429 aa9.82□□□□□ -0.84
TRIM49B-202ENST00000622138 ABCC10Q5T3U5 1492 aa9.82□□□□□ -0.84
TRIM49B-202ENST00000622138 MAGI1Q96QZ7 1491 aaPredicted RBP9.82□□□□□ -0.84
TRIM49B-202ENST00000622138 ANKRD30AQ9BXX3 1397 aa9.82□□□□□ -0.84
TRIM49B-202ENST00000622138 SYNJ2O15056 1496 aa9.82□□□□□ -0.84
TRIM49B-202ENST00000622138 RALGAPBQ86X10 1494 aa9.82□□□□□ -0.84
TRIM49B-202ENST00000622138 PDCL3Q9H2J4 239 aa9.81□□□□□ -0.84
TRIM49B-202ENST00000622138 ABCA8O94911 1581 aa9.8□□□□□ -0.84
TRIM49B-202ENST00000622138 C9orf84Q5VXU9 1444 aa9.8□□□□□ -0.84
TRIM49B-202ENST00000622138 UHRF1BP1Q6BDS2 1440 aa9.8□□□□□ -0.84
TRIM49B-202ENST00000622138 NUP160Q12769 1436 aa9.8□□□□□ -0.84
TRIM49B-202ENST00000622138 TPM2P07951 284 aa9.8□□□□□ -0.84
TRIM49B-202ENST00000622138 NUDCQ9Y266 331 aa9.8□□□□□ -0.84
TRIM49B-202ENST00000622138 SHANK2Q9UPX8 1470 aa9.79□□□□□ -0.84
TRIM49B-202ENST00000622138 CHMP7Q8WUX9 453 aaPredicted RBP9.79□□□□□ -0.84
TRIM49B-202ENST00000622138 KDM5DQ9BY66 1539 aa9.79□□□□□ -0.84
TRIM49B-202ENST00000622138 NUP155O75694 1391 aa9.78□□□□□ -0.84
TRIM49B-202ENST00000622138 ARHGEF12Q9NZN5 1544 aa9.78□□□□□ -0.84
TRIM49B-202ENST00000622138 ATP10BO94823 1461 aa9.78□□□□□ -0.84
TRIM49B-202ENST00000622138 FBLN2P98095 1184 aa9.78□□□□□ -0.84
TRIM49B-202ENST00000622138 E9PCH4 1651 aa9.77□□□□□ -0.85
TRIM49B-202ENST00000622138 CARMIL2Q6F5E8 1435 aa9.77□□□□□ -0.85
TRIM49B-202ENST00000622138 TAF7LQ5H9L4 462 aa9.77□□□□□ -0.85
TRIM49B-202ENST00000622138 JPH4Q96JJ6 628 aa9.77□□□□□ -0.85
TRIM49B-202ENST00000622138 PTPRGP23470 1445 aa9.76□□□□□ -0.85
TRIM49B-202ENST00000622138 BCL11BQ9C0K0 894 aaPredicted RBP9.76□□□□□ -0.85
TRIM49B-202ENST00000622138 VIRMAQ69YN4 1812 aaKnown RBP9.76□□□□□ -0.85
TRIM49B-202ENST00000622138 PNISRQ8TF01 805 aaKnown RBP9.75□□□□□ -0.85
TRIM49B-202ENST00000622138 CARD11Q9BXL7 1154 aa9.75□□□□□ -0.85
TRIM49B-202ENST00000622138 ERCC6Q03468 1493 aa9.75□□□□□ -0.85
TRIM49B-202ENST00000622138 KIF15Q9NS87 1388 aa9.75□□□□□ -0.85
TRIM49B-202ENST00000622138 PHF23Q9BUL5 403 aaPredicted RBP9.74□□□□□ -0.85
TRIM49B-202ENST00000622138 KDM2AQ9Y2K7 1162 aa9.74□□□□□ -0.85
TRIM49B-202ENST00000622138 ARID4BQ4LE39 1312 aaPredicted RBP9.74□□□□□ -0.85
TRIM49B-202ENST00000622138 SAMD9LQ8IVG5 1584 aa9.74□□□□□ -0.85
TRIM49B-202ENST00000622138 ST20-MTHFSA0A0A6YYL1 179 aa9.74□□□□□ -0.85
TRIM49B-202ENST00000622138 HNRNPMP52272 730 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRIM49B-202ENST00000622138 ARHGEF5Q12774 1597 aa9.73□□□□□ -0.85
TRIM49B-202ENST00000622138 ROCK2O75116 1388 aaKnown RBP9.73□□□□□ -0.85
TRIM49B-202ENST00000622138 LRPPRCP42704 1394 aaKnown RBP9.73□□□□□ -0.85
TRIM49B-202ENST00000622138 PLEKHD1A6NEE1 506 aa9.73□□□□□ -0.85
TRIM49B-202ENST00000622138 FRAT2O75474 233 aaPredicted RBP9.73□□□□□ -0.85
TRIM49B-202ENST00000622138 FAM135AQ9P2D6 1515 aa9.72□□□□□ -0.85
TRIM49B-202ENST00000622138 MAP7D2Q96T17 732 aa9.72□□□□□ -0.85
TRIM49B-202ENST00000622138 CDC42BPBQ9Y5S2 1711 aa9.72□□□□□ -0.85
TRIM49B-202ENST00000622138 TRPM1Q7Z4N2 1603 aa9.71□□□□□ -0.85
TRIM49B-202ENST00000622138 PREX2Q70Z35 1606 aa9.71□□□□□ -0.86
TRIM49B-202ENST00000622138 CCDC141Q6ZP82 1450 aa9.7□□□□□ -0.86
TRIM49B-202ENST00000622138 NCLP19338 710 aaKnown RBP9.7□□□□□ -0.86
TRIM49B-202ENST00000622138 SMAP1Q8IYB5 467 aaPredicted RBP9.7□□□□□ -0.86
TRIM49B-202ENST00000622138 TMC1Q8TDI8 760 aa9.7□□□□□ -0.86
TRIM49B-202ENST00000622138 PRAG1Q86YV5 1406 aa9.7□□□□□ -0.86
TRIM49B-202ENST00000622138 PLA2R1Q13018 1463 aa9.69□□□□□ -0.86
TRIM49B-202ENST00000622138 BRD4O60885 1362 aaPredicted RBP9.69□□□□□ -0.86
TRIM49B-202ENST00000622138 MYBBP1AQ9BQG0 1328 aaKnown RBP9.69□□□□□ -0.86
TRIM49B-202ENST00000622138 TSPY4P0CV99 314 aa9.69□□□□□ -0.86
TRIM49B-202ENST00000622138 TSPY10P0CW01 314 aa9.69□□□□□ -0.86
TRIM49B-202ENST00000622138 RGS3P49796 1198 aa9.69□□□□□ -0.86
TRIM49B-202ENST00000622138 SYCP2Q9BX26 1530 aa9.69□□□□□ -0.86
TRIM49B-202ENST00000622138 TTC37Q6PGP7 1564 aa9.69□□□□□ -0.86
TRIM49B-202ENST00000622138 A2MP01023 1474 aa9.68□□□□□ -0.86
TRIM49B-202ENST00000622138 UNC13BO14795 1591 aa9.68□□□□□ -0.86
TRIM49B-202ENST00000622138 NBPF1Q3BBV0 1214 aa9.67□□□□□ -0.86
TRIM49B-202ENST00000622138 PARD3Q8TEW0 1356 aa9.67□□□□□ -0.86
TRIM49B-202ENST00000622138 RRP1P56182 461 aaKnown RBP9.66□□□□□ -0.86
TRIM49B-202ENST00000622138 POGKQ9P215 609 aa9.66□□□□□ -0.86
TRIM49B-202ENST00000622138 DISP3Q9P2K9 1392 aa9.66□□□□□ -0.86
TRIM49B-202ENST00000622138 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
TRIM49B-202ENST00000622138 MYO5CQ9NQX4 1742 aa9.66□□□□□ -0.86
TRIM49B-202ENST00000622138 CCDC144AA2RUR9 1427 aa9.66□□□□□ -0.86
TRIM49B-202ENST00000622138 FSD2A1L4K1 749 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms