RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 TRPM1Q7Z4N2 1603 aa11□□□□□ -0.65
GDNF-208ENST00000620847 CHD1O14646 1710 aa11□□□□□ -0.65
GDNF-208ENST00000620847 RSPH4AQ5TD94 716 aa10.99□□□□□ -0.65
GDNF-208ENST00000620847 SHROOM2Q13796 1616 aa10.99□□□□□ -0.65
GDNF-208ENST00000620847 POLR3GLQ9BT43 218 aa10.99□□□□□ -0.65
GDNF-208ENST00000620847 TTC37Q6PGP7 1564 aa10.99□□□□□ -0.65
GDNF-208ENST00000620847 SYCP2Q9BX26 1530 aa10.98□□□□□ -0.65
GDNF-208ENST00000620847 DCAF11Q8TEB1 546 aa10.98□□□□□ -0.65
GDNF-208ENST00000620847 ST20-MTHFSA0A0A6YYL1 179 aa10.97□□□□□ -0.65
GDNF-208ENST00000620847 PNISRQ8TF01 805 aaKnown RBP10.97□□□□□ -0.65
GDNF-208ENST00000620847 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.97□□□□□ -0.65
GDNF-208ENST00000620847 PLXNC1O60486 1568 aa10.97□□□□□ -0.65
GDNF-208ENST00000620847 DEKP35659 375 aaKnown RBP10.97□□□□□ -0.65
GDNF-208ENST00000620847 KTN1Q86UP2 1357 aaKnown RBP10.97□□□□□ -0.65
GDNF-208ENST00000620847 KDM2AQ9Y2K7 1162 aa10.97□□□□□ -0.65
GDNF-208ENST00000620847 MYO5CQ9NQX4 1742 aa10.97□□□□□ -0.65
GDNF-208ENST00000620847 RNF123Q5XPI4 1314 aa10.96□□□□□ -0.65
GDNF-208ENST00000620847 IQGAP3Q86VI3 1631 aa10.96□□□□□ -0.65
GDNF-208ENST00000620847 PRAG1Q86YV5 1406 aa10.96□□□□□ -0.65
GDNF-208ENST00000620847 NUDCQ9Y266 331 aa10.96□□□□□ -0.65
GDNF-208ENST00000620847 LAMC1P11047 1609 aa10.96□□□□□ -0.66
GDNF-208ENST00000620847 ARHGAP5Q13017 1502 aa10.96□□□□□ -0.66
GDNF-208ENST00000620847 LRPPRCP42704 1394 aaKnown RBP10.95□□□□□ -0.66
GDNF-208ENST00000620847 CCDC144AA2RUR9 1427 aa10.95□□□□□ -0.66
GDNF-208ENST00000620847 PLA2R1Q13018 1463 aa10.95□□□□□ -0.66
GDNF-208ENST00000620847 CNGB1Q14028 1251 aaPredicted RBP10.95□□□□□ -0.66
GDNF-208ENST00000620847 B4GALNT3Q6L9W6 998 aa10.94□□□□□ -0.66
GDNF-208ENST00000620847 BRD4O60885 1362 aaPredicted RBP10.94□□□□□ -0.66
GDNF-208ENST00000620847 MYBBP1AQ9BQG0 1328 aaKnown RBP10.93□□□□□ -0.66
GDNF-208ENST00000620847 TMC1Q8TDI8 760 aa10.93□□□□□ -0.66
GDNF-208ENST00000620847 ABCC2Q92887 1545 aa10.93□□□□□ -0.66
GDNF-208ENST00000620847 GPRASP1Q5JY77 1395 aa10.93□□□□□ -0.66
GDNF-208ENST00000620847 RALBP1Q15311 655 aa10.93□□□□□ -0.66
GDNF-208ENST00000620847 A2MP01023 1474 aa10.93□□□□□ -0.66
GDNF-208ENST00000620847 PLEKHH2Q8IVE3 1493 aa10.93□□□□□ -0.66
GDNF-208ENST00000620847 MAGI2Q86UL8 1455 aa10.92□□□□□ -0.66
GDNF-208ENST00000620847 PRDM15P57071 1507 aaPredicted RBP10.92□□□□□ -0.66
GDNF-208ENST00000620847 DUOX2Q9NRD8 1548 aa10.91□□□□□ -0.66
GDNF-208ENST00000620847 ATP10AO60312 1499 aa10.91□□□□□ -0.66
GDNF-208ENST00000620847 EIF2AK4Q9P2K8 1649 aaKnown RBP10.91□□□□□ -0.66
GDNF-208ENST00000620847 ERCC6L2Q5T890 1561 aa10.91□□□□□ -0.66
GDNF-208ENST00000620847 PARD3Q8TEW0 1356 aa10.9□□□□□ -0.67
GDNF-208ENST00000620847 COL17A1Q9UMD9 1497 aaPredicted RBP10.89□□□□□ -0.67
GDNF-208ENST00000620847 ERBINQ96RT1 1412 aa10.89□□□□□ -0.67
GDNF-208ENST00000620847 NOP58Q9Y2X3 529 aaKnown RBP10.89□□□□□ -0.67
GDNF-208ENST00000620847 PRKCSHP14314 528 aaPredicted RBP10.89□□□□□ -0.67
GDNF-208ENST00000620847 NBPF1Q3BBV0 1214 aa10.89□□□□□ -0.67
GDNF-208ENST00000620847 RNF17Q9BXT8 1623 aaKnown RBP10.88□□□□□ -0.67
GDNF-208ENST00000620847 ZCCHC11Q5TAX3 1644 aaKnown RBP10.88□□□□□ -0.67
GDNF-208ENST00000620847 PER1O15534 1290 aaPredicted RBP10.88□□□□□ -0.67
GDNF-208ENST00000620847 RGL3Q3MIN7 710 aa10.87□□□□□ -0.67
GDNF-208ENST00000620847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.87□□□□□ -0.67
GDNF-208ENST00000620847 PLCH2O75038 1416 aa10.87□□□□□ -0.67
GDNF-208ENST00000620847 TESK2Q96S53 571 aa10.86□□□□□ -0.67
GDNF-208ENST00000620847 NLRP13Q86W25 1043 aa10.86□□□□□ -0.67
GDNF-208ENST00000620847 ABCC1P33527 1531 aa10.86□□□□□ -0.67
GDNF-208ENST00000620847 NBR1Q14596 966 aa10.85□□□□□ -0.67
GDNF-208ENST00000620847 DISP3Q9P2K9 1392 aa10.85□□□□□ -0.67
GDNF-208ENST00000620847 WASHC2CQ9Y4E1 1318 aa10.85□□□□□ -0.67
GDNF-208ENST00000620847 SENP3-EIF4A1A0A087X0R7 540 aa10.85□□□□□ -0.67
GDNF-208ENST00000620847 UHRF1BP1LA0JNW5 1464 aa10.84□□□□□ -0.67
GDNF-208ENST00000620847 ZMYM4Q5VZL5 1548 aa10.84□□□□□ -0.67
GDNF-208ENST00000620847 RTL5Q5HYW3 569 aaPredicted RBP10.84□□□□□ -0.67
GDNF-208ENST00000620847 CCDC136Q96JN2 1154 aa10.83□□□□□ -0.68
GDNF-208ENST00000620847 INSRP06213 1382 aa10.83□□□□□ -0.68
GDNF-208ENST00000620847 MADDQ8WXG6 1647 aa10.83□□□□□ -0.68
GDNF-208ENST00000620847 CLASP1Q7Z460 1538 aa10.82□□□□□ -0.68
GDNF-208ENST00000620847 IQGAP1P46940 1657 aa10.82□□□□□ -0.68
GDNF-208ENST00000620847 CEP152O94986 1710 aa10.82□□□□□ -0.68
GDNF-208ENST00000620847 ANP32AP39687 249 aaKnown RBP10.82□□□□□ -0.68
GDNF-208ENST00000620847 TRAPPC8Q9Y2L5 1435 aa10.82□□□□□ -0.68
GDNF-208ENST00000620847 PDE3BQ13370 1112 aa10.82□□□□□ -0.68
GDNF-208ENST00000620847 EFCAB2Q5VUJ9 269 aa10.82□□□□□ -0.68
GDNF-208ENST00000620847 SPHKAPQ2M3C7 1700 aa10.81□□□□□ -0.68
GDNF-208ENST00000620847 BLMP54132 1417 aaPredicted RBP10.81□□□□□ -0.68
GDNF-208ENST00000620847 DEPDC5O75140 1603 aa10.81□□□□□ -0.68
GDNF-208ENST00000620847 TRPM2O94759 1503 aa10.81□□□□□ -0.68
GDNF-208ENST00000620847 ARAP3Q8WWN8 1544 aa10.81□□□□□ -0.68
GDNF-208ENST00000620847 RRP1P56182 461 aaKnown RBP10.81□□□□□ -0.68
GDNF-208ENST00000620847 TMF1P82094 1093 aa10.8□□□□□ -0.68
GDNF-208ENST00000620847 ZFYVE16Q7Z3T8 1539 aa10.8□□□□□ -0.68
GDNF-208ENST00000620847 PANK3Q9H999 370 aa10.8□□□□□ -0.68
GDNF-208ENST00000620847 RTEL1-TNFRSF6BF6WH68 1400 aa10.8□□□□□ -0.68
GDNF-208ENST00000620847 PAK3O75914 559 aaPredicted RBP10.79□□□□□ -0.68
GDNF-208ENST00000620847 RCAN3Q9UKA8 241 aa10.79□□□□□ -0.68
GDNF-208ENST00000620847 CC2D1BQ5T0F9 858 aaKnown RBP10.78□□□□□ -0.68
GDNF-208ENST00000620847 WDR7Q9Y4E6 1490 aa10.78□□□□□ -0.68
GDNF-208ENST00000620847 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
GDNF-208ENST00000620847 CLTCL1P53675 1640 aa10.78□□□□□ -0.68
GDNF-208ENST00000620847 PTPRTO14522 1441 aa10.78□□□□□ -0.68
GDNF-208ENST00000620847 TET3O43151 1660 aa10.78□□□□□ -0.68
GDNF-208ENST00000620847 IPO9Q96P70 1041 aaKnown RBP10.77□□□□□ -0.68
GDNF-208ENST00000620847 SYNMO15061 1565 aa10.76□□□□□ -0.69
GDNF-208ENST00000620847 VWDEQ8N2E2 1590 aa10.76□□□□□ -0.69
GDNF-208ENST00000620847 SCAPERQ9BY12 1400 aa10.76□□□□□ -0.69
GDNF-208ENST00000620847 KIAA1210Q9ULL0 1709 aa10.76□□□□□ -0.69
GDNF-208ENST00000620847 INO80Q9ULG1 1556 aaPredicted RBP10.76□□□□□ -0.69
GDNF-208ENST00000620847 SPAG9O60271 1321 aaKnown RBP10.76□□□□□ -0.69
GDNF-208ENST00000620847 SALL2Q9Y467 1007 aaPredicted RBP10.76□□□□□ -0.69
GDNF-208ENST00000620847 EXOC6Q8TAG9 804 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms