RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 ADGBQ8N7X0 1667 aa13.19□□□□□ -0.3
CDH23-213ENST00000619887 LRRIQ1Q96JM4 1722 aa13.18□□□□□ -0.3
CDH23-213ENST00000619887 NUDCQ9Y266 331 aa13.18□□□□□ -0.3
CDH23-213ENST00000619887 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.18□□□□□ -0.3
CDH23-213ENST00000619887 CC2D1BQ5T0F9 858 aaKnown RBP13.18□□□□□ -0.3
CDH23-213ENST00000619887 NEFMP07197 916 aa13.18□□□□□ -0.3
CDH23-213ENST00000619887 PZPP20742 1482 aa13.17□□□□□ -0.3
CDH23-213ENST00000619887 ANP32AP39687 249 aaKnown RBP13.17□□□□□ -0.3
CDH23-213ENST00000619887 ABCA8O94911 1581 aa13.16□□□□□ -0.3
CDH23-213ENST00000619887 TEX14Q8IWB6 1497 aa13.14□□□□□ -0.31
CDH23-213ENST00000619887 C11orf95C9JLR9 678 aaPredicted RBP13.14□□□□□ -0.31
CDH23-213ENST00000619887 PDE3BQ13370 1112 aa13.14□□□□□ -0.31
CDH23-213ENST00000619887 BRD4O60885 1362 aaPredicted RBP13.13□□□□□ -0.31
CDH23-213ENST00000619887 KDM6BO15054 1643 aa13.13□□□□□ -0.31
CDH23-213ENST00000619887 RALGAPBQ86X10 1494 aa13.12□□□□□ -0.31
CDH23-213ENST00000619887 ARHGEF12Q9NZN5 1544 aa13.12□□□□□ -0.31
CDH23-213ENST00000619887 ADCY10Q96PN6 1610 aa13.12□□□□□ -0.31
CDH23-213ENST00000619887 ABCC10Q5T3U5 1492 aa13.12□□□□□ -0.31
CDH23-213ENST00000619887 B4GALNT3Q6L9W6 998 aa13.12□□□□□ -0.31
CDH23-213ENST00000619887 WASHC2CQ9Y4E1 1318 aa13.11□□□□□ -0.31
CDH23-213ENST00000619887 ARHGEF5Q12774 1597 aa13.1□□□□□ -0.31
CDH23-213ENST00000619887 RBM19Q9Y4C8 960 aaKnown RBP13.1□□□□□ -0.31
CDH23-213ENST00000619887 ABCC2Q92887 1545 aa13.09□□□□□ -0.31
CDH23-213ENST00000619887 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
CDH23-213ENST00000619887 AFAP1Q8N556 730 aa13.09□□□□□ -0.31
CDH23-213ENST00000619887 PANK3Q9H999 370 aa13.09□□□□□ -0.31
CDH23-213ENST00000619887 SYCP2Q9BX26 1530 aa13.09□□□□□ -0.31
CDH23-213ENST00000619887 RTL5Q5HYW3 569 aaPredicted RBP13.09□□□□□ -0.31
CDH23-213ENST00000619887 GGT6Q6P531 493 aa13.09□□□□□ -0.31
CDH23-213ENST00000619887 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
CDH23-213ENST00000619887 PLCH2O75038 1416 aa13.08□□□□□ -0.32
CDH23-213ENST00000619887 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
CDH23-213ENST00000619887 DUOX2Q9NRD8 1548 aa13.08□□□□□ -0.32
CDH23-213ENST00000619887 FAM135AQ9P2D6 1515 aa13.08□□□□□ -0.32
CDH23-213ENST00000619887 CFAP53Q96M91 514 aa13.07□□□□□ -0.32
CDH23-213ENST00000619887 UHRF1BP1Q6BDS2 1440 aa13.07□□□□□ -0.32
CDH23-213ENST00000619887 ERBINQ96RT1 1412 aa13.07□□□□□ -0.32
CDH23-213ENST00000619887 CCDC184Q52MB2 194 aa13.06□□□□□ -0.32
CDH23-213ENST00000619887 RCAN3Q9UKA8 241 aa13.06□□□□□ -0.32
CDH23-213ENST00000619887 ANP32EQ9BTT0 268 aa13.06□□□□□ -0.32
CDH23-213ENST00000619887 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
CDH23-213ENST00000619887 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
CDH23-213ENST00000619887 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
CDH23-213ENST00000619887 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.32
CDH23-213ENST00000619887 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
CDH23-213ENST00000619887 MBD5Q9P267 1494 aa13.02□□□□□ -0.33
CDH23-213ENST00000619887 CDC42BPAQ5VT25 1732 aa13.01□□□□□ -0.33
CDH23-213ENST00000619887 SPATA31E1Q6ZUB1 1445 aa13.01□□□□□ -0.33
CDH23-213ENST00000619887 DENND4BO75064 1496 aaPredicted RBP13.01□□□□□ -0.33
CDH23-213ENST00000619887 PRAG1Q86YV5 1406 aa13□□□□□ -0.33
CDH23-213ENST00000619887 CROCC2H7BZ55 1655 aa13□□□□□ -0.33
CDH23-213ENST00000619887 PREX2Q70Z35 1606 aa13□□□□□ -0.33
CDH23-213ENST00000619887 MORC1Q86VD1 984 aa12.99□□□□□ -0.33
CDH23-213ENST00000619887 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
CDH23-213ENST00000619887 EIF2AK4Q9P2K8 1649 aaKnown RBP12.99□□□□□ -0.33
CDH23-213ENST00000619887 ADGRL1O94910 1474 aa12.99□□□□□ -0.33
CDH23-213ENST00000619887 FANCAO15360 1455 aa12.98□□□□□ -0.33
CDH23-213ENST00000619887 CHD1O14646 1710 aa12.98□□□□□ -0.33
CDH23-213ENST00000619887 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
CDH23-213ENST00000619887 MYO5CQ9NQX4 1742 aa12.98□□□□□ -0.33
CDH23-213ENST00000619887 RTEL1-TNFRSF6BF6WH68 1400 aa12.98□□□□□ -0.33
CDH23-213ENST00000619887 KDM5BQ9UGL1 1544 aa12.97□□□□□ -0.33
CDH23-213ENST00000619887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDH23-213ENST00000619887 POGKQ9P215 609 aa12.97□□□□□ -0.33
CDH23-213ENST00000619887 RRP1P56182 461 aaKnown RBP12.96□□□□□ -0.33
CDH23-213ENST00000619887 WDR7Q9Y4E6 1490 aa12.96□□□□□ -0.33
CDH23-213ENST00000619887 VGFO15240 615 aaPredicted RBP12.96□□□□□ -0.34
CDH23-213ENST00000619887 UHRF1BP1LA0JNW5 1464 aa12.96□□□□□ -0.34
CDH23-213ENST00000619887 GOLGA2Q08379 1002 aa12.96□□□□□ -0.34
CDH23-213ENST00000619887 MLECQ14165 292 aa12.95□□□□□ -0.34
CDH23-213ENST00000619887 TRAPPC8Q9Y2L5 1435 aa12.95□□□□□ -0.34
CDH23-213ENST00000619887 NGEFQ8N5V2 710 aa12.95□□□□□ -0.34
CDH23-213ENST00000619887 DHX29Q7Z478 1369 aaKnown RBP12.94□□□□□ -0.34
CDH23-213ENST00000619887 CENPJQ9HC77 1338 aaPredicted RBP12.94□□□□□ -0.34
CDH23-213ENST00000619887 TRAK1Q9UPV9 953 aa12.93□□□□□ -0.34
CDH23-213ENST00000619887 TCERG1O14776 1098 aaKnown RBP12.93□□□□□ -0.34
CDH23-213ENST00000619887 MAST1Q9Y2H9 1570 aa12.93□□□□□ -0.34
CDH23-213ENST00000619887 C14orf37Q86TY3 774 aa12.93□□□□□ -0.34
CDH23-213ENST00000619887 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
CDH23-213ENST00000619887 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
CDH23-213ENST00000619887 TTC37Q6PGP7 1564 aa12.92□□□□□ -0.34
CDH23-213ENST00000619887 SCAF11Q99590 1463 aaKnown RBP12.92□□□□□ -0.34
CDH23-213ENST00000619887 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
CDH23-213ENST00000619887 SRPK2P78362 688 aaKnown RBP12.91□□□□□ -0.34
CDH23-213ENST00000619887 FANCIQ9NVI1 1328 aa12.91□□□□□ -0.34
CDH23-213ENST00000619887 PPM1GO15355 546 aaPredicted RBP12.91□□□□□ -0.34
CDH23-213ENST00000619887 KDM5CP41229 1560 aa12.91□□□□□ -0.34
CDH23-213ENST00000619887 A2MP01023 1474 aa12.9□□□□□ -0.34
CDH23-213ENST00000619887 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
CDH23-213ENST00000619887 EVC2Q86UK5 1308 aa12.9□□□□□ -0.34
CDH23-213ENST00000619887 CD109Q6YHK3 1445 aa12.9□□□□□ -0.34
CDH23-213ENST00000619887 DDRGK1Q96HY6 314 aa12.9□□□□□ -0.34
CDH23-213ENST00000619887 RPGRIP1LQ68CZ1 1315 aa12.9□□□□□ -0.34
CDH23-213ENST00000619887 PNNQ9H307 717 aaKnown RBP12.9□□□□□ -0.34
CDH23-213ENST00000619887 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
CDH23-213ENST00000619887 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
CDH23-213ENST00000619887 ASXL2Q76L83 1435 aa12.89□□□□□ -0.35
CDH23-213ENST00000619887 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
CDH23-213ENST00000619887 HDGFP51858 240 aaKnown RBP12.88□□□□□ -0.35
CDH23-213ENST00000619887 NEUROD2Q15784 382 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms