RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 TSPY4P0CV99 314 aa15.26■□□□□ 0.03
TP53-222ENST00000617185 TSPY10P0CW01 314 aa15.26■□□□□ 0.03
TP53-222ENST00000617185 MS4A1P11836 297 aa15.26■□□□□ 0.03
TP53-222ENST00000617185 ANKRD30BQ9BXX2 1392 aa15.25■□□□□ 0.03
TP53-222ENST00000617185 CCDC184Q52MB2 194 aa15.24■□□□□ 0.03
TP53-222ENST00000617185 RRAGDQ9NQL2 400 aaPredicted RBP15.24■□□□□ 0.03
TP53-222ENST00000617185 CDC42BPAQ5VT25 1732 aa15.24■□□□□ 0.03
TP53-222ENST00000617185 POLR3GLQ9BT43 218 aa15.23■□□□□ 0.03
TP53-222ENST00000617185 ITSN2Q9NZM3 1697 aa15.23■□□□□ 0.03
TP53-222ENST00000617185 ABCC10Q5T3U5 1492 aa15.23■□□□□ 0.03
TP53-222ENST00000617185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
TP53-222ENST00000617185 NAP1L5Q96NT1 182 aaPredicted RBP15.23■□□□□ 0.03
TP53-222ENST00000617185 NUDCQ9Y266 331 aa15.23■□□□□ 0.03
TP53-222ENST00000617185 ANKRD30AQ9BXX3 1397 aa15.22■□□□□ 0.03
TP53-222ENST00000617185 NUP155O75694 1391 aa15.22■□□□□ 0.03
TP53-222ENST00000617185 ANKRD50Q9ULJ7 1429 aa15.22■□□□□ 0.03
TP53-222ENST00000617185 MRS2Q9HD23 443 aa15.22■□□□□ 0.03
TP53-222ENST00000617185 C9orf84Q5VXU9 1444 aa15.21■□□□□ 0.03
TP53-222ENST00000617185 PZPP20742 1482 aa15.21■□□□□ 0.03
TP53-222ENST00000617185 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.02
TP53-222ENST00000617185 RBM10P98175 930 aaKnown RBP15.21■□□□□ 0.02
TP53-222ENST00000617185 KDM2AQ9Y2K7 1162 aa15.21■□□□□ 0.02
TP53-222ENST00000617185 ADCY10Q96PN6 1610 aa15.2■□□□□ 0.02
TP53-222ENST00000617185 PNNQ9H307 717 aaKnown RBP15.19■□□□□ 0.02
TP53-222ENST00000617185 A0A0U1RQG5 324 aaPredicted RBP15.18■□□□□ 0.02
TP53-222ENST00000617185 AAMPQ13685 434 aa15.18■□□□□ 0.02
TP53-222ENST00000617185 KIF15Q9NS87 1388 aa15.18■□□□□ 0.02
TP53-222ENST00000617185 PRKRIP1Q9H875 184 aaPredicted RBP15.17■□□□□ 0.02
TP53-222ENST00000617185 FGD1P98174 961 aa15.17■□□□□ 0.02
TP53-222ENST00000617185 CNTLNQ9NXG0 1405 aa15.17■□□□□ 0.02
TP53-222ENST00000617185 RPRD2Q5VT52 1461 aaKnown RBP15.17■□□□□ 0.02
TP53-222ENST00000617185 TTC37Q6PGP7 1564 aa15.14■□□□□ 0.01
TP53-222ENST00000617185 ARHGAP5Q13017 1502 aa15.14■□□□□ 0.01
TP53-222ENST00000617185 FRAT2O75474 233 aaPredicted RBP15.14■□□□□ 0.01
TP53-222ENST00000617185 L1TD1Q5T7N2 865 aaKnown RBP15.14■□□□□ 0.01
TP53-222ENST00000617185 CROCC2H7BZ55 1655 aa15.13■□□□□ 0.01
TP53-222ENST00000617185 SAMD9LQ8IVG5 1584 aa15.13■□□□□ 0.01
TP53-222ENST00000617185 CLCN1P35523 988 aa15.13■□□□□ 0.01
TP53-222ENST00000617185 RGL3Q3MIN7 710 aa15.13■□□□□ 0.01
TP53-222ENST00000617185 TEX14Q8IWB6 1497 aa15.13■□□□□ 0.01
TP53-222ENST00000617185 ADGBQ8N7X0 1667 aa15.13■□□□□ 0.01
TP53-222ENST00000617185 CDC42BPBQ9Y5S2 1711 aa15.13■□□□□ 0.01
TP53-222ENST00000617185 SYCP2Q9BX26 1530 aa15.12■□□□□ 0.01
TP53-222ENST00000617185 ADGRL2O95490 1459 aa15.12■□□□□ 0.01
TP53-222ENST00000617185 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
TP53-222ENST00000617185 KIAA1107Q9UPP5 1409 aa15.12■□□□□ 0.01
TP53-222ENST00000617185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.11■□□□□ 0.01
TP53-222ENST00000617185 CENPJQ9HC77 1338 aaPredicted RBP15.1■□□□□ 0.01
TP53-222ENST00000617185 SENP3-EIF4A1A0A087X0R7 540 aa15.09■□□□□ 0.01
TP53-222ENST00000617185 SHROOM2Q13796 1616 aa15.09■□□□□ 0.01
TP53-222ENST00000617185 SLC4A3P48751 1232 aa15.09■□□□□ 0.01
TP53-222ENST00000617185 PDE4CQ08493 712 aa15.09■□□□□ 0.01
TP53-222ENST00000617185 CALD1Q05682 793 aaKnown RBP15.08■□□□□ 0.01
TP53-222ENST00000617185 ABCC2Q92887 1545 aa15.08■□□□□ 0.01
TP53-222ENST00000617185 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0
TP53-222ENST00000617185 AFAP1Q8N556 730 aa15.07■□□□□ 0
TP53-222ENST00000617185 PDCL3Q9H2J4 239 aa15.06■□□□□ 0
TP53-222ENST00000617185 KIF7Q2M1P5 1343 aa15.06■□□□□ 0
TP53-222ENST00000617185 PREX2Q70Z35 1606 aa15.06■□□□□ 0
TP53-222ENST00000617185 ARHGEF12Q9NZN5 1544 aa15.05■□□□□ -0
TP53-222ENST00000617185 PRDM4Q9UKN5 801 aa15.04■□□□□ -0
TP53-222ENST00000617185 CCDC7Q96M83 1385 aa15.04■□□□□ -0
TP53-222ENST00000617185 EXOC6Q8TAG9 804 aa15.04■□□□□ -0
TP53-222ENST00000617185 PLEKHH2Q8IVE3 1493 aa15.03■□□□□ -0
TP53-222ENST00000617185 SHANK2Q9UPX8 1470 aa15.03■□□□□ -0
TP53-222ENST00000617185 ZCCHC11Q5TAX3 1644 aaKnown RBP15.03■□□□□ -0
TP53-222ENST00000617185 CARD11Q9BXL7 1154 aa15.02■□□□□ -0
TP53-222ENST00000617185 CLASP1Q7Z460 1538 aa15.02■□□□□ -0
TP53-222ENST00000617185 RRP1P56182 461 aaKnown RBP15.02□□□□□ -0.01
TP53-222ENST00000617185 USP47Q96K76 1375 aa15.01□□□□□ -0.01
TP53-222ENST00000617185 EFCAB2Q5VUJ9 269 aa15.01□□□□□ -0.01
TP53-222ENST00000617185 POGKQ9P215 609 aa15.01□□□□□ -0.01
TP53-222ENST00000617185 TRAPPC8Q9Y2L5 1435 aa15□□□□□ -0.01
TP53-222ENST00000617185 ARHGEF5Q12774 1597 aa14.99□□□□□ -0.01
TP53-222ENST00000617185 TPM2P07951 284 aa14.99□□□□□ -0.01
TP53-222ENST00000617185 FAM135AQ9P2D6 1515 aa14.99□□□□□ -0.01
TP53-222ENST00000617185 SPATA31E1Q6ZUB1 1445 aa14.98□□□□□ -0.01
TP53-222ENST00000617185 MYO5CQ9NQX4 1742 aa14.98□□□□□ -0.01
TP53-222ENST00000617185 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
TP53-222ENST00000617185 NBPF1Q3BBV0 1214 aa14.97□□□□□ -0.01
TP53-222ENST00000617185 RSPH4AQ5TD94 716 aa14.97□□□□□ -0.01
TP53-222ENST00000617185 PLCH2O75038 1416 aa14.96□□□□□ -0.01
TP53-222ENST00000617185 RGS3P49796 1198 aa14.95□□□□□ -0.02
TP53-222ENST00000617185 SPAG9O60271 1321 aaKnown RBP14.95□□□□□ -0.02
TP53-222ENST00000617185 CCDC144AA2RUR9 1427 aa14.94□□□□□ -0.02
TP53-222ENST00000617185 XRCC6P12956 609 aaKnown RBP eCLIP14.94□□□□□ -0.02
TP53-222ENST00000617185 BCORL1Q5H9F3 1711 aa14.93□□□□□ -0.02
TP53-222ENST00000617185 GOLGA6L3A6NEY3 463 aa14.93□□□□□ -0.02
TP53-222ENST00000617185 PDIA4P13667 645 aaKnown RBP14.92□□□□□ -0.02
TP53-222ENST00000617185 PHF23Q9BUL5 403 aaPredicted RBP14.92□□□□□ -0.02
TP53-222ENST00000617185 ROCK2O75116 1388 aaKnown RBP14.92□□□□□ -0.02
TP53-222ENST00000617185 PLA2R1Q13018 1463 aa14.91□□□□□ -0.02
TP53-222ENST00000617185 RCAN3Q9UKA8 241 aa14.91□□□□□ -0.02
TP53-222ENST00000617185 FAM161AQ3B820 660 aa14.91□□□□□ -0.02
TP53-222ENST00000617185 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
TP53-222ENST00000617185 KIF3BO15066 747 aa14.89□□□□□ -0.03
TP53-222ENST00000617185 KDM5DQ9BY66 1539 aa14.89□□□□□ -0.03
TP53-222ENST00000617185 FSD2A1L4K1 749 aa14.89□□□□□ -0.03
TP53-222ENST00000617185 SCAPERQ9BY12 1400 aa14.89□□□□□ -0.03
TP53-222ENST00000617185 ESPNB1AK53 854 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms