RNA–Protein interactions for RNA: ENST00000617020.1

PCDH9-206, Transcript of protocadherin 9, humanhuman

TSL 5

Gene PCDH9, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-206ENST00000617020 MAGI3Q5TCQ9 1506 aa11.24□□□□□ -0.61
PCDH9-206ENST00000617020 PSEN1P49768 467 aa11.23□□□□□ -0.61
PCDH9-206ENST00000617020 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
PCDH9-206ENST00000617020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.61
PCDH9-206ENST00000617020 UACAQ9BZF9 1416 aa11.23□□□□□ -0.61
PCDH9-206ENST00000617020 KLHL34Q8N239 644 aa11.22□□□□□ -0.61
PCDH9-206ENST00000617020 WDR7Q9Y4E6 1490 aa11.21□□□□□ -0.61
PCDH9-206ENST00000617020 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
PCDH9-206ENST00000617020 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
PCDH9-206ENST00000617020 CARMIL2Q6F5E8 1435 aa11.19□□□□□ -0.62
PCDH9-206ENST00000617020 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
PCDH9-206ENST00000617020 KRTAP3-2Q9BYR7 98 aa11.19□□□□□ -0.62
PCDH9-206ENST00000617020 CD109Q6YHK3 1445 aa11.18□□□□□ -0.62
PCDH9-206ENST00000617020 HS3ST6Q96QI5 342 aa11.18□□□□□ -0.62
PCDH9-206ENST00000617020 ARAP3Q8WWN8 1544 aa11.18□□□□□ -0.62
PCDH9-206ENST00000617020 STRCQ7RTU9 1775 aa11.18□□□□□ -0.62
PCDH9-206ENST00000617020 IQGAP2Q13576 1575 aa11.16□□□□□ -0.62
PCDH9-206ENST00000617020 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
PCDH9-206ENST00000617020 PDAP1Q13442 181 aaKnown RBP11.15□□□□□ -0.62
PCDH9-206ENST00000617020 PREX1Q8TCU6 1659 aa11.14□□□□□ -0.63
PCDH9-206ENST00000617020 DISP1Q96F81 1524 aa11.14□□□□□ -0.63
PCDH9-206ENST00000617020 FRMPD1Q5SYB0 1578 aa11.13□□□□□ -0.63
PCDH9-206ENST00000617020 DPY19L2Q6NUT2 758 aa11.13□□□□□ -0.63
PCDH9-206ENST00000617020 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
PCDH9-206ENST00000617020 ARID4BQ4LE39 1312 aaPredicted RBP11.1□□□□□ -0.63
PCDH9-206ENST00000617020 ARHGEF40Q8TER5 1519 aa11.1□□□□□ -0.63
PCDH9-206ENST00000617020 SIGLEC1Q9BZZ2 1709 aa11.1□□□□□ -0.63
PCDH9-206ENST00000617020 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
PCDH9-206ENST00000617020 KIAA0556O60303 1618 aa11.09□□□□□ -0.63
PCDH9-206ENST00000617020 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
PCDH9-206ENST00000617020 MED1Q15648 1581 aaPredicted RBP11.08□□□□□ -0.64
PCDH9-206ENST00000617020 TTC37Q6PGP7 1564 aa11.08□□□□□ -0.64
PCDH9-206ENST00000617020 CABP2Q9NPB3 220 aa11.08□□□□□ -0.64
PCDH9-206ENST00000617020 LTBP4Q8N2S1 1624 aa11.07□□□□□ -0.64
PCDH9-206ENST00000617020 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
PCDH9-206ENST00000617020 IQSEC2Q5JU85 1478 aa11.06□□□□□ -0.64
PCDH9-206ENST00000617020 G3V3G9 751 aa11.05□□□□□ -0.64
PCDH9-206ENST00000617020 YEATS2Q9ULM3 1422 aa11.05□□□□□ -0.64
PCDH9-206ENST00000617020 IGF1RP08069 1367 aa11.04□□□□□ -0.64
PCDH9-206ENST00000617020 RICTORQ6R327 1708 aa11.04□□□□□ -0.64
PCDH9-206ENST00000617020 RAPGEF3O95398 923 aa11.04□□□□□ -0.64
PCDH9-206ENST00000617020 ABCA9Q8IUA7 1624 aa11.04□□□□□ -0.64
PCDH9-206ENST00000617020 SPOCK2Q92563 424 aa11.03□□□□□ -0.64
PCDH9-206ENST00000617020 UGGT2Q9NYU1 1516 aa11.03□□□□□ -0.64
PCDH9-206ENST00000617020 HOXB1P14653 301 aaPredicted RBP11.02□□□□□ -0.65
PCDH9-206ENST00000617020 FANCAO15360 1455 aa11.01□□□□□ -0.65
PCDH9-206ENST00000617020 ABCA8O94911 1581 aa11.01□□□□□ -0.65
PCDH9-206ENST00000617020 CIZ1Q9ULV3 898 aaPredicted RBP11□□□□□ -0.65
PCDH9-206ENST00000617020 DOK7Q18PE1 504 aa10.99□□□□□ -0.65
PCDH9-206ENST00000617020 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
PCDH9-206ENST00000617020 ZNF710Q8N1W2 664 aa10.99□□□□□ -0.65
PCDH9-206ENST00000617020 PHLDB1Q86UU1 1377 aa10.99□□□□□ -0.65
PCDH9-206ENST00000617020 NEO1Q92859 1461 aa10.99□□□□□ -0.65
PCDH9-206ENST00000617020 PTPRTO14522 1441 aa10.98□□□□□ -0.65
PCDH9-206ENST00000617020 POGZQ7Z3K3 1410 aa10.98□□□□□ -0.65
PCDH9-206ENST00000617020 KIF27Q86VH2 1401 aa10.98□□□□□ -0.65
PCDH9-206ENST00000617020 SETD1BQ9UPS6 1966 aaKnown RBP10.97□□□□□ -0.65
PCDH9-206ENST00000617020 CARMIL1Q5VZK9 1371 aa10.96□□□□□ -0.65
PCDH9-206ENST00000617020 ERBB3P21860 1342 aa10.95□□□□□ -0.66
PCDH9-206ENST00000617020 ZFYVE16Q7Z3T8 1539 aa10.94□□□□□ -0.66
PCDH9-206ENST00000617020 ZMYM4Q5VZL5 1548 aa10.94□□□□□ -0.66
PCDH9-206ENST00000617020 ARHGEF12Q9NZN5 1544 aa10.94□□□□□ -0.66
PCDH9-206ENST00000617020 CTTNBP2Q8WZ74 1663 aa10.93□□□□□ -0.66
PCDH9-206ENST00000617020 UHRF1BP1Q6BDS2 1440 aa10.92□□□□□ -0.66
PCDH9-206ENST00000617020 AKNAQ7Z591 1439 aa10.92□□□□□ -0.66
PCDH9-206ENST00000617020 EFCAB3Q8N7B9 438 aa10.92□□□□□ -0.66
PCDH9-206ENST00000617020 EFCAB5A4FU69 1503 aa10.92□□□□□ -0.66
PCDH9-206ENST00000617020 UBAP1LF5GYI3 381 aa10.91□□□□□ -0.66
PCDH9-206ENST00000617020 MLECQ14165 292 aa10.91□□□□□ -0.66
PCDH9-206ENST00000617020 RIMBP2O15034 1052 aa10.9□□□□□ -0.66
PCDH9-206ENST00000617020 DENND4BO75064 1496 aaPredicted RBP10.89□□□□□ -0.67
PCDH9-206ENST00000617020 RNF166Q96A37 237 aaPredicted RBP10.89□□□□□ -0.67
PCDH9-206ENST00000617020 CFAP74Q9C0B2 1584 aa10.89□□□□□ -0.67
PCDH9-206ENST00000617020 C3P01024 1663 aa10.89□□□□□ -0.67
PCDH9-206ENST00000617020 CEBPAP49715 358 aaPredicted RBP10.88□□□□□ -0.67
PCDH9-206ENST00000617020 FHOD3Q2V2M9 1422 aa10.88□□□□□ -0.67
PCDH9-206ENST00000617020 VARS2Q5ST30 1063 aaKnown RBP10.88□□□□□ -0.67
PCDH9-206ENST00000617020 TMEM92Q6UXU6 159 aa10.88□□□□□ -0.67
PCDH9-206ENST00000617020 MICALL2Q8IY33 904 aa10.88□□□□□ -0.67
PCDH9-206ENST00000617020 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
PCDH9-206ENST00000617020 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
PCDH9-206ENST00000617020 NCOA1Q15788 1441 aa10.86□□□□□ -0.67
PCDH9-206ENST00000617020 ARID3CA6NKF2 412 aa10.85□□□□□ -0.67
PCDH9-206ENST00000617020 HSPA1LP34931 641 aa10.85□□□□□ -0.67
PCDH9-206ENST00000617020 ATP10BO94823 1461 aa10.85□□□□□ -0.67
PCDH9-206ENST00000617020 GOLGA3Q08378 1498 aa10.84□□□□□ -0.67
PCDH9-206ENST00000617020 MAGI2Q86UL8 1455 aa10.83□□□□□ -0.68
PCDH9-206ENST00000617020 ZNF687Q8N1G0 1237 aa10.83□□□□□ -0.68
PCDH9-206ENST00000617020 ZNF335Q9H4Z2 1342 aaPredicted RBP10.83□□□□□ -0.68
PCDH9-206ENST00000617020 SUPT6HQ7KZ85 1726 aaKnown RBP10.82□□□□□ -0.68
PCDH9-206ENST00000617020 MYT1LQ9UL68 1186 aa10.82□□□□□ -0.68
PCDH9-206ENST00000617020 CAMSAP1Q5T5Y3 1602 aa10.82□□□□□ -0.68
PCDH9-206ENST00000617020 RAPGEF2Q9Y4G8 1499 aa10.81□□□□□ -0.68
PCDH9-206ENST00000617020 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
PCDH9-206ENST00000617020 SETD1AO15047 1707 aaKnown RBP10.81□□□□□ -0.68
PCDH9-206ENST00000617020 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
PCDH9-206ENST00000617020 C9orf84Q5VXU9 1444 aa10.8□□□□□ -0.68
PCDH9-206ENST00000617020 SOX12O15370 315 aa10.79□□□□□ -0.68
PCDH9-206ENST00000617020 ATP10AO60312 1499 aa10.78□□□□□ -0.68
PCDH9-206ENST00000617020 RAPGEF6Q8TEU7 1601 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms