RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 MIA2Q96PC5 1412 aa12.41□□□□□ -0.42
MCM3-207ENST00000616552 PBRM1Q86U86 1689 aa12.41□□□□□ -0.42
MCM3-207ENST00000616552 ADAMTS8Q9UP79 889 aa12.4□□□□□ -0.42
MCM3-207ENST00000616552 ARID4BQ4LE39 1312 aaPredicted RBP12.39□□□□□ -0.43
MCM3-207ENST00000616552 DDRGK1Q96HY6 314 aa12.39□□□□□ -0.43
MCM3-207ENST00000616552 ZMYM4Q5VZL5 1548 aa12.39□□□□□ -0.43
MCM3-207ENST00000616552 RRAGDQ9NQL2 400 aaPredicted RBP12.39□□□□□ -0.43
MCM3-207ENST00000616552 PZPP20742 1482 aa12.39□□□□□ -0.43
MCM3-207ENST00000616552 NLRP13Q86W25 1043 aa12.39□□□□□ -0.43
MCM3-207ENST00000616552 CCDC146Q8IYE0 955 aa12.39□□□□□ -0.43
MCM3-207ENST00000616552 ROCK1Q13464 1354 aa12.38□□□□□ -0.43
MCM3-207ENST00000616552 EPRSP07814 1512 aaKnown RBP12.38□□□□□ -0.43
MCM3-207ENST00000616552 BRD4O60885 1362 aaPredicted RBP12.38□□□□□ -0.43
MCM3-207ENST00000616552 MBD5Q9P267 1494 aa12.37□□□□□ -0.43
MCM3-207ENST00000616552 GZF1Q9H116 711 aaPredicted RBP12.37□□□□□ -0.43
MCM3-207ENST00000616552 PANK3Q9H999 370 aa12.37□□□□□ -0.43
MCM3-207ENST00000616552 RALBP1Q15311 655 aa12.37□□□□□ -0.43
MCM3-207ENST00000616552 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
MCM3-207ENST00000616552 CFDP1Q9UEE9 299 aaPredicted RBP12.37□□□□□ -0.43
MCM3-207ENST00000616552 INSRP06213 1382 aa12.37□□□□□ -0.43
MCM3-207ENST00000616552 KDM2BQ8NHM5 1336 aa12.36□□□□□ -0.43
MCM3-207ENST00000616552 BCAR3O75815 825 aa12.36□□□□□ -0.43
MCM3-207ENST00000616552 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
MCM3-207ENST00000616552 PER1O15534 1290 aaPredicted RBP12.35□□□□□ -0.43
MCM3-207ENST00000616552 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
MCM3-207ENST00000616552 ROCK2O75116 1388 aaKnown RBP12.34□□□□□ -0.43
MCM3-207ENST00000616552 NUP155O75694 1391 aa12.34□□□□□ -0.43
MCM3-207ENST00000616552 KTN1Q86UP2 1357 aaKnown RBP12.34□□□□□ -0.43
MCM3-207ENST00000616552 IGHDP01880 384 aa12.34□□□□□ -0.43
MCM3-207ENST00000616552 KDM5CP41229 1560 aa12.34□□□□□ -0.43
MCM3-207ENST00000616552 MAGI1Q96QZ7 1491 aaPredicted RBP12.33□□□□□ -0.44
MCM3-207ENST00000616552 KIF14Q15058 1648 aa12.33□□□□□ -0.44
MCM3-207ENST00000616552 E9PCH4 1651 aa12.33□□□□□ -0.44
MCM3-207ENST00000616552 PLEKHH1Q9ULM0 1364 aa12.33□□□□□ -0.44
MCM3-207ENST00000616552 DNMT1P26358 1616 aaKnown RBP12.33□□□□□ -0.44
MCM3-207ENST00000616552 PANK2Q9BZ23 570 aa12.32□□□□□ -0.44
MCM3-207ENST00000616552 DMRT2Q9Y5R5 561 aa12.32□□□□□ -0.44
MCM3-207ENST00000616552 PRG4Q92954 1404 aaPredicted RBP12.32□□□□□ -0.44
MCM3-207ENST00000616552 ADAMTS12P58397 1594 aa12.32□□□□□ -0.44
MCM3-207ENST00000616552 KIAA1107Q9UPP5 1409 aa12.32□□□□□ -0.44
MCM3-207ENST00000616552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.32□□□□□ -0.449e-9■■■■□ 22.4
MCM3-207ENST00000616552 CHD1O14646 1710 aa12.31□□□□□ -0.44
MCM3-207ENST00000616552 DUSP27Q5VZP5 1158 aa12.31□□□□□ -0.44
MCM3-207ENST00000616552 DISP3Q9P2K9 1392 aa12.31□□□□□ -0.44
MCM3-207ENST00000616552 SYNJ2O15056 1496 aa12.31□□□□□ -0.44
MCM3-207ENST00000616552 PDE3BQ13370 1112 aa12.3□□□□□ -0.44
MCM3-207ENST00000616552 USP19O94966 1318 aa12.3□□□□□ -0.44
MCM3-207ENST00000616552 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
MCM3-207ENST00000616552 CENPQQ7L2Z9 268 aaPredicted RBP12.29□□□□□ -0.44
MCM3-207ENST00000616552 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
MCM3-207ENST00000616552 TNNQ9UQP3 1299 aa12.28□□□□□ -0.44
MCM3-207ENST00000616552 PANK1Q8TE04 598 aa12.28□□□□□ -0.44
MCM3-207ENST00000616552 HNRNPMP52272 730 aaKnown RBP eCLIP12.28□□□□□ -0.44
MCM3-207ENST00000616552 FAM43AQ8N2R8 423 aa12.28□□□□□ -0.44
MCM3-207ENST00000616552 KIAA0586Q9BVV6 1533 aa12.27□□□□□ -0.44
MCM3-207ENST00000616552 UHRF1BP1Q6BDS2 1440 aa12.27□□□□□ -0.45
MCM3-207ENST00000616552 GRIN2AQ12879 1464 aa12.27□□□□□ -0.45
MCM3-207ENST00000616552 NEUROD2Q15784 382 aa12.27□□□□□ -0.45
MCM3-207ENST00000616552 COG6Q9Y2V7 657 aa12.27□□□□□ -0.45
MCM3-207ENST00000616552 NAP1L5Q96NT1 182 aaPredicted RBP12.26□□□□□ -0.45
MCM3-207ENST00000616552 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
MCM3-207ENST00000616552 BCL2L13Q9BXK5 485 aa12.26□□□□□ -0.45
MCM3-207ENST00000616552 ARHGEF12Q9NZN5 1544 aa12.26□□□□□ -0.45
MCM3-207ENST00000616552 APAF1O14727 1248 aa12.25□□□□□ -0.45
MCM3-207ENST00000616552 CROCC2H7BZ55 1655 aa12.25□□□□□ -0.45
MCM3-207ENST00000616552 VSIG10Q8N0Z9 540 aa12.25□□□□□ -0.45
MCM3-207ENST00000616552 RSPH6AQ9H0K4 717 aa12.24□□□□□ -0.45
MCM3-207ENST00000616552 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.451e-6■■■□□ 16.7
MCM3-207ENST00000616552 ANKRD50Q9ULJ7 1429 aa12.24□□□□□ -0.45
MCM3-207ENST00000616552 TESK2Q96S53 571 aa12.24□□□□□ -0.45
MCM3-207ENST00000616552 RALGAPBQ86X10 1494 aa12.23□□□□□ -0.45
MCM3-207ENST00000616552 XRCC6P12956 609 aaKnown RBP eCLIP12.23□□□□□ -0.45
MCM3-207ENST00000616552 GOLGA2Q08379 1002 aa12.23□□□□□ -0.45
MCM3-207ENST00000616552 CLUAP1Q96AJ1 413 aa12.22□□□□□ -0.45
MCM3-207ENST00000616552 ADGRL2O95490 1459 aa12.22□□□□□ -0.45
MCM3-207ENST00000616552 CAMSAP2Q08AD1 1489 aa12.22□□□□□ -0.45
MCM3-207ENST00000616552 RRP7AQ9Y3A4 280 aaKnown RBP12.22□□□□□ -0.45
MCM3-207ENST00000616552 PPP2R1AP30153 589 aa12.22□□□□□ -0.45
MCM3-207ENST00000616552 LAMC1P11047 1609 aa12.22□□□□□ -0.45
MCM3-207ENST00000616552 ADCY10Q96PN6 1610 aa12.22□□□□□ -0.45
MCM3-207ENST00000616552 KDM5DQ9BY66 1539 aa12.21□□□□□ -0.45
MCM3-207ENST00000616552 CEP170Q5SW79 1584 aa12.21□□□□□ -0.45
MCM3-207ENST00000616552 PKNOX2Q96KN3 472 aa12.21□□□□□ -0.45
MCM3-207ENST00000616552 TNNT2P45379 298 aaPredicted RBP12.2□□□□□ -0.46
MCM3-207ENST00000616552 NUP153P49790 1475 aaKnown RBP12.19□□□□□ -0.46
MCM3-207ENST00000616552 CANXP27824 592 aaKnown RBP12.19□□□□□ -0.46
MCM3-207ENST00000616552 ITSN2Q9NZM3 1697 aa12.19□□□□□ -0.46
MCM3-207ENST00000616552 BLMP54132 1417 aaPredicted RBP12.19□□□□□ -0.46
MCM3-207ENST00000616552 SLFN5Q08AF3 891 aa12.19□□□□□ -0.46
MCM3-207ENST00000616552 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
MCM3-207ENST00000616552 ZMYND15Q9H091 742 aa12.18□□□□□ -0.46
MCM3-207ENST00000616552 ANKRD30AQ9BXX3 1397 aa12.18□□□□□ -0.46
MCM3-207ENST00000616552 NUP160Q12769 1436 aa12.18□□□□□ -0.46
MCM3-207ENST00000616552 PLEKHH2Q8IVE3 1493 aa12.17□□□□□ -0.46
MCM3-207ENST00000616552 KNSTRNQ9Y448 316 aa12.17□□□□□ -0.46
MCM3-207ENST00000616552 ANTXR1Q9H6X2 564 aa12.17□□□□□ -0.46
MCM3-207ENST00000616552 PLB1Q6P1J6 1458 aa12.17□□□□□ -0.46
MCM3-207ENST00000616552 RLBP1P12271 317 aa12.16□□□□□ -0.46
MCM3-207ENST00000616552 PCDHB15Q9Y5E8 787 aa12.16□□□□□ -0.46
MCM3-207ENST00000616552 GPATCH8Q9UKJ3 1502 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms