RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 TCERG1O14776 1098 aaKnown RBP11.57□□□□□ -0.56
SPTBN1-207ENST00000615901 PEG3Q9GZU2 1588 aa11.56□□□□□ -0.56
SPTBN1-207ENST00000615901 FGD1P98174 961 aa11.56□□□□□ -0.56
SPTBN1-207ENST00000615901 POLA1P09884 1462 aaPredicted RBP11.56□□□□□ -0.56
SPTBN1-207ENST00000615901 HDAC5Q9UQL6 1122 aa11.56□□□□□ -0.56
SPTBN1-207ENST00000615901 PMFBP1Q8TBY8 1022 aa11.55□□□□□ -0.56
SPTBN1-207ENST00000615901 ITPRIPQ8IWB1 547 aa11.55□□□□□ -0.56
SPTBN1-207ENST00000615901 EVC2Q86UK5 1308 aa11.55□□□□□ -0.56
SPTBN1-207ENST00000615901 NPHP1O15259 732 aa11.55□□□□□ -0.56
SPTBN1-207ENST00000615901 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
SPTBN1-207ENST00000615901 ANKRD50Q9ULJ7 1429 aa11.55□□□□□ -0.56
SPTBN1-207ENST00000615901 IQGAP2Q13576 1575 aa11.54□□□□□ -0.56
SPTBN1-207ENST00000615901 VGFO15240 615 aaPredicted RBP11.54□□□□□ -0.56
SPTBN1-207ENST00000615901 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
SPTBN1-207ENST00000615901 CENPJQ9HC77 1338 aaPredicted RBP11.54□□□□□ -0.56
SPTBN1-207ENST00000615901 BICRAQ9NZM4 1560 aa11.53□□□□□ -0.56
SPTBN1-207ENST00000615901 STK31Q9BXU1 1019 aa11.53□□□□□ -0.56
SPTBN1-207ENST00000615901 BIVM-ERCC5R4GMW8 1640 aa11.53□□□□□ -0.56
SPTBN1-207ENST00000615901 ABCA10Q8WWZ4 1543 aa11.52□□□□□ -0.56
SPTBN1-207ENST00000615901 HMMRO75330 724 aa11.52□□□□□ -0.56
SPTBN1-207ENST00000615901 NGEFQ8N5V2 710 aa11.52□□□□□ -0.56
SPTBN1-207ENST00000615901 SOX12O15370 315 aa11.52□□□□□ -0.57
SPTBN1-207ENST00000615901 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
SPTBN1-207ENST00000615901 GPATCH3Q96I76 525 aa11.51□□□□□ -0.57
SPTBN1-207ENST00000615901 ST20-MTHFSA0A0A6YYL1 179 aa11.51□□□□□ -0.57
SPTBN1-207ENST00000615901 L1TD1Q5T7N2 865 aaKnown RBP11.51□□□□□ -0.57
SPTBN1-207ENST00000615901 NRDCO43847 1150 aa11.51□□□□□ -0.57
SPTBN1-207ENST00000615901 PAK3O75914 559 aaPredicted RBP11.51□□□□□ -0.57
SPTBN1-207ENST00000615901 KIAA1211Q6ZU35 1233 aa11.5□□□□□ -0.57
SPTBN1-207ENST00000615901 CNTLNQ9NXG0 1405 aa11.5□□□□□ -0.57
SPTBN1-207ENST00000615901 NESP48681 1621 aa11.5□□□□□ -0.57
SPTBN1-207ENST00000615901 SMC4Q9NTJ3 1288 aa11.5□□□□□ -0.57
SPTBN1-207ENST00000615901 PRG4Q92954 1404 aaPredicted RBP11.49□□□□□ -0.57
SPTBN1-207ENST00000615901 C9orf84Q5VXU9 1444 aa11.49□□□□□ -0.57
SPTBN1-207ENST00000615901 PCF11O94913 1555 aaKnown RBP11.49□□□□□ -0.57
SPTBN1-207ENST00000615901 HFM1A2PYH4 1435 aa11.48□□□□□ -0.57
SPTBN1-207ENST00000615901 SCAPERQ9BY12 1400 aa11.48□□□□□ -0.57
SPTBN1-207ENST00000615901 GOLGA6L4A6NEF3 574 aa11.48□□□□□ -0.57
SPTBN1-207ENST00000615901 PANK3Q9H999 370 aa11.48□□□□□ -0.57
SPTBN1-207ENST00000615901 SNAPC4Q5SXM2 1469 aa11.48□□□□□ -0.57
SPTBN1-207ENST00000615901 GBP4Q96PP9 640 aa11.48□□□□□ -0.57
SPTBN1-207ENST00000615901 PRKRIP1Q9H875 184 aaPredicted RBP11.48□□□□□ -0.57
SPTBN1-207ENST00000615901 CSB-PGBD3P0DP91 1061 aa11.47□□□□□ -0.57
SPTBN1-207ENST00000615901 TROQ12816 1431 aaPredicted RBP11.47□□□□□ -0.57
SPTBN1-207ENST00000615901 KIF14Q15058 1648 aa11.47□□□□□ -0.57
SPTBN1-207ENST00000615901 RBM19Q9Y4C8 960 aaKnown RBP11.47□□□□□ -0.57
SPTBN1-207ENST00000615901 E9PSI1 815 aa11.46□□□□□ -0.57
SPTBN1-207ENST00000615901 MAP3K1Q13233 1512 aa11.46□□□□□ -0.57
SPTBN1-207ENST00000615901 NGDNQ8NEJ9 315 aaKnown RBP11.46□□□□□ -0.57
SPTBN1-207ENST00000615901 CCDC7Q96M83 1385 aa11.46□□□□□ -0.58
SPTBN1-207ENST00000615901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.46□□□□□ -0.585e-8■□□□□ 9.5
SPTBN1-207ENST00000615901 COG3Q96JB2 828 aa11.45□□□□□ -0.58
SPTBN1-207ENST00000615901 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.45□□□□□ -0.58
SPTBN1-207ENST00000615901 TRAK1Q9UPV9 953 aa11.44□□□□□ -0.58
SPTBN1-207ENST00000615901 PTPN23Q9H3S7 1636 aa11.44□□□□□ -0.58
SPTBN1-207ENST00000615901 AMPHP49418 695 aa11.44□□□□□ -0.58
SPTBN1-207ENST00000615901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.588e-7■■■□□ 15.4
SPTBN1-207ENST00000615901 KIAA0586Q9BVV6 1533 aa11.44□□□□□ -0.58
SPTBN1-207ENST00000615901 CCDC146Q8IYE0 955 aa11.43□□□□□ -0.58
SPTBN1-207ENST00000615901 NAP1L2Q9ULW6 460 aaPredicted RBP11.43□□□□□ -0.58
SPTBN1-207ENST00000615901 DNTTIP2Q5QJE6 756 aaKnown RBP11.43□□□□□ -0.58
SPTBN1-207ENST00000615901 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
SPTBN1-207ENST00000615901 HTATSF1O43719 755 aaKnown RBP11.43□□□□□ -0.58
SPTBN1-207ENST00000615901 NUTM2DQ5VT03 806 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-207ENST00000615901 CENPQQ7L2Z9 268 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-207ENST00000615901 MAGI1Q96QZ7 1491 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-207ENST00000615901 KIAA1107Q9UPP5 1409 aa11.41□□□□□ -0.58
SPTBN1-207ENST00000615901 DAPK1P53355 1430 aa11.41□□□□□ -0.58
SPTBN1-207ENST00000615901 ROCK1Q13464 1354 aa11.41□□□□□ -0.58
SPTBN1-207ENST00000615901 CHAF1AQ13111 956 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-207ENST00000615901 SYAP1Q96A49 352 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-207ENST00000615901 THOC2Q8NI27 1593 aaKnown RBP11.41□□□□□ -0.58
SPTBN1-207ENST00000615901 BRD4O60885 1362 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-207ENST00000615901 KIF7Q2M1P5 1343 aa11.4□□□□□ -0.58
SPTBN1-207ENST00000615901 GNL2Q13823 731 aaKnown RBP11.4□□□□□ -0.58
SPTBN1-207ENST00000615901 CTTNBP2Q8WZ74 1663 aa11.4□□□□□ -0.58
SPTBN1-207ENST00000615901 RRP1P56182 461 aaKnown RBP11.4□□□□□ -0.58
SPTBN1-207ENST00000615901 AAMPQ13685 434 aa11.39□□□□□ -0.59
SPTBN1-207ENST00000615901 ZNF644Q9H582 1327 aaPredicted RBP11.39□□□□□ -0.59
SPTBN1-207ENST00000615901 CCDC141Q6ZP82 1450 aa11.39□□□□□ -0.59
SPTBN1-207ENST00000615901 APBB1O00213 710 aa11.39□□□□□ -0.59
SPTBN1-207ENST00000615901 ZKSCAN2Q63HK3 967 aa11.38□□□□□ -0.59
SPTBN1-207ENST00000615901 IPO9Q96P70 1041 aaKnown RBP11.38□□□□□ -0.59
SPTBN1-207ENST00000615901 TPRNQ4KMQ1 711 aa11.38□□□□□ -0.59
SPTBN1-207ENST00000615901 ITSN2Q9NZM3 1697 aa11.38□□□□□ -0.59
SPTBN1-207ENST00000615901 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
SPTBN1-207ENST00000615901 CAMSAP2Q08AD1 1489 aa11.36□□□□□ -0.59
SPTBN1-207ENST00000615901 MINK1Q8N4C8 1332 aaPredicted RBP11.36□□□□□ -0.59
SPTBN1-207ENST00000615901 CDK13Q14004 1512 aaKnown RBP11.36□□□□□ -0.59
SPTBN1-207ENST00000615901 MSNP26038 577 aaKnown RBP11.36□□□□□ -0.59
SPTBN1-207ENST00000615901 MFAP1P55081 439 aaKnown RBP11.35□□□□□ -0.59
SPTBN1-207ENST00000615901 NAP1L5Q96NT1 182 aaPredicted RBP11.35□□□□□ -0.59
SPTBN1-207ENST00000615901 KAT6BQ8WYB5 2073 aa11.35□□□□□ -0.59
SPTBN1-207ENST00000615901 ST18O60284 1047 aa11.35□□□□□ -0.59
SPTBN1-207ENST00000615901 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
SPTBN1-207ENST00000615901 GORABQ5T7V8 394 aa11.35□□□□□ -0.59
SPTBN1-207ENST00000615901 DIAPH1O60610 1272 aaKnown RBP11.34□□□□□ -0.59
SPTBN1-207ENST00000615901 C1orf141Q5JVX7 400 aa11.34□□□□□ -0.59
SPTBN1-207ENST00000615901 TRIM6-TRIM34B2RNG4 842 aa11.34□□□□□ -0.59
SPTBN1-207ENST00000615901 PLCB2Q00722 1185 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms