RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 APAF1O14727 1248 aa15.14■□□□□ 0.01
CDH5-208ENST00000614547 ANKRD30BQ9BXX2 1392 aa15.13■□□□□ 0.01
CDH5-208ENST00000614547 FOXD4L1Q9NU39 408 aa15.13■□□□□ 0.01
CDH5-208ENST00000614547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDH5-208ENST00000614547 LAMC3Q9Y6N6 1575 aa15.12■□□□□ 0.01
CDH5-208ENST00000614547 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDH5-208ENST00000614547 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
CDH5-208ENST00000614547 ZBTB7CA1YPR0 619 aa15.12■□□□□ 0.01
CDH5-208ENST00000614547 BCAR3O75815 825 aa15.12■□□□□ 0.01
CDH5-208ENST00000614547 MFAP1P55081 439 aaKnown RBP15.12■□□□□ 0.01
CDH5-208ENST00000614547 MAP3K1Q13233 1512 aa15.12■□□□□ 0.01
CDH5-208ENST00000614547 KIF21AQ7Z4S6 1674 aa15.11■□□□□ 0.01
CDH5-208ENST00000614547 CDK13Q14004 1512 aaKnown RBP15.11■□□□□ 0.01
CDH5-208ENST00000614547 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
CDH5-208ENST00000614547 BRD4O60885 1362 aaPredicted RBP15.11■□□□□ 0.01
CDH5-208ENST00000614547 RSPH6AQ9H0K4 717 aa15.11■□□□□ 0.01
CDH5-208ENST00000614547 PANK1Q8TE04 598 aa15.11■□□□□ 0.01
CDH5-208ENST00000614547 NCLP19338 710 aaKnown RBP15.1■□□□□ 0.01
CDH5-208ENST00000614547 L1TD1Q5T7N2 865 aaKnown RBP15.1■□□□□ 0.01
CDH5-208ENST00000614547 GOLGA6L3A6NEY3 463 aa15.09■□□□□ 0.01
CDH5-208ENST00000614547 PRG4Q92954 1404 aaPredicted RBP15.09■□□□□ 0.01
CDH5-208ENST00000614547 TPRNQ4KMQ1 711 aa15.08■□□□□ 0
CDH5-208ENST00000614547 FTSJ3Q8IY81 847 aaKnown RBP15.07■□□□□ 0
CDH5-208ENST00000614547 PLB1Q6P1J6 1458 aa15.07■□□□□ 0
CDH5-208ENST00000614547 DHX29Q7Z478 1369 aaKnown RBP15.06■□□□□ 0
CDH5-208ENST00000614547 ANP32BQ92688 251 aaKnown RBP15.06■□□□□ 0
CDH5-208ENST00000614547 PTPRGP23470 1445 aa15.06■□□□□ 0
CDH5-208ENST00000614547 ANKRD30AQ9BXX3 1397 aa15.05■□□□□ 0
CDH5-208ENST00000614547 PRDM2Q13029 1718 aa15.05■□□□□ 0
CDH5-208ENST00000614547 RNF123Q5XPI4 1314 aa15.04■□□□□ -0
CDH5-208ENST00000614547 SLC24A1O60721 1099 aa15.03■□□□□ -0
CDH5-208ENST00000614547 HSP90AA2PQ14568 343 aaPredicted RBP15.03■□□□□ -0
CDH5-208ENST00000614547 CARMIL2Q6F5E8 1435 aa15.03■□□□□ -0
CDH5-208ENST00000614547 WASHC2CQ9Y4E1 1318 aa15.02■□□□□ -0
CDH5-208ENST00000614547 CENPJQ9HC77 1338 aaPredicted RBP15.02□□□□□ -0.01
CDH5-208ENST00000614547 RPRD2Q5VT52 1461 aaKnown RBP15.02□□□□□ -0.01
CDH5-208ENST00000614547 HSP90AB1P08238 724 aaKnown RBP15.01□□□□□ -0.01
CDH5-208ENST00000614547 MLECQ14165 292 aa15.01□□□□□ -0.01
CDH5-208ENST00000614547 NUTM2DQ5VT03 806 aaPredicted RBP15.01□□□□□ -0.01
CDH5-208ENST00000614547 FAM43AQ8N2R8 423 aa15□□□□□ -0.01
CDH5-208ENST00000614547 AFAP1Q8N556 730 aa15□□□□□ -0.01
CDH5-208ENST00000614547 IFT140Q96RY7 1462 aa15□□□□□ -0.01
CDH5-208ENST00000614547 HSCBQ8IWL3 235 aa15□□□□□ -0.01
CDH5-208ENST00000614547 UBE2Q2Q8WVN8 375 aa14.99□□□□□ -0.01
CDH5-208ENST00000614547 MYH16Q9H6N6 1097 aa14.99□□□□□ -0.01
CDH5-208ENST00000614547 C8orf34Q49A92 452 aa14.99□□□□□ -0.01
CDH5-208ENST00000614547 GGT6Q6P531 493 aa14.99□□□□□ -0.01
CDH5-208ENST00000614547 SEC24BO95487 1268 aa14.98□□□□□ -0.01
CDH5-208ENST00000614547 DAPK1P53355 1430 aa14.98□□□□□ -0.01
CDH5-208ENST00000614547 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
CDH5-208ENST00000614547 PPP2R1AP30153 589 aa14.97□□□□□ -0.01
CDH5-208ENST00000614547 IGHDP01880 384 aa14.97□□□□□ -0.01
CDH5-208ENST00000614547 EFCAB5A4FU69 1503 aa14.96□□□□□ -0.01
CDH5-208ENST00000614547 MIA2Q96PC5 1412 aa14.96□□□□□ -0.01
CDH5-208ENST00000614547 ANKRD50Q9ULJ7 1429 aa14.96□□□□□ -0.01
CDH5-208ENST00000614547 KIAA1107Q9UPP5 1409 aa14.96□□□□□ -0.01
CDH5-208ENST00000614547 PANK2Q9BZ23 570 aa14.96□□□□□ -0.02
CDH5-208ENST00000614547 SUPT6HQ7KZ85 1726 aaKnown RBP14.95□□□□□ -0.02
CDH5-208ENST00000614547 EHBP1L1Q8N3D4 1523 aa14.95□□□□□ -0.02
CDH5-208ENST00000614547 SAFB2Q14151 953 aaKnown RBP eCLIP14.95□□□□□ -0.02
CDH5-208ENST00000614547 ABCC5O15440 1437 aa14.95□□□□□ -0.02
CDH5-208ENST00000614547 ITPRIPQ8IWB1 547 aa14.95□□□□□ -0.02
CDH5-208ENST00000614547 MORC1Q86VD1 984 aa14.94□□□□□ -0.02
CDH5-208ENST00000614547 PKNOX2Q96KN3 472 aa14.94□□□□□ -0.02
CDH5-208ENST00000614547 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
CDH5-208ENST00000614547 CDCA8Q53HL2 280 aa14.94□□□□□ -0.02
CDH5-208ENST00000614547 DUSP27Q5VZP5 1158 aa14.94□□□□□ -0.02
CDH5-208ENST00000614547 CCDC144AA2RUR9 1427 aa14.93□□□□□ -0.02
CDH5-208ENST00000614547 RRAGDQ9NQL2 400 aaPredicted RBP14.93□□□□□ -0.02
CDH5-208ENST00000614547 RWDD1Q9H446 243 aaPredicted RBP14.93□□□□□ -0.02
CDH5-208ENST00000614547 KDM6BO15054 1643 aa14.92□□□□□ -0.02
CDH5-208ENST00000614547 GRIN2AQ12879 1464 aa14.92□□□□□ -0.02
CDH5-208ENST00000614547 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
CDH5-208ENST00000614547 U2AF1L5P0DN76 240 aaPredicted RBP14.92□□□□□ -0.02
CDH5-208ENST00000614547 U2AF1Q01081 240 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDH5-208ENST00000614547 PDZRN3Q9UPQ7 1066 aa14.92□□□□□ -0.02
CDH5-208ENST00000614547 TRAK2O60296 914 aa14.91□□□□□ -0.02
CDH5-208ENST00000614547 MAPK8IP3Q9UPT6 1336 aa14.91□□□□□ -0.02
CDH5-208ENST00000614547 CFAP43Q8NDM7 1665 aa14.91□□□□□ -0.02
CDH5-208ENST00000614547 E9PSI1 815 aa14.9□□□□□ -0.02
CDH5-208ENST00000614547 APBB1O00213 710 aa14.9□□□□□ -0.02
CDH5-208ENST00000614547 CGNL1Q0VF96 1302 aa14.9□□□□□ -0.02
CDH5-208ENST00000614547 PMFBP1Q8TBY8 1022 aa14.9□□□□□ -0.02
CDH5-208ENST00000614547 EPRSP07814 1512 aaKnown RBP14.9□□□□□ -0.02
CDH5-208ENST00000614547 KIF3BO15066 747 aa14.89□□□□□ -0.03
CDH5-208ENST00000614547 SPINK5Q9NQ38 1064 aaPredicted RBP14.89□□□□□ -0.03
CDH5-208ENST00000614547 SMC4Q9NTJ3 1288 aa14.89□□□□□ -0.03
CDH5-208ENST00000614547 SPATA31E1Q6ZUB1 1445 aa14.89□□□□□ -0.03
CDH5-208ENST00000614547 TNNQ9UQP3 1299 aa14.88□□□□□ -0.03
CDH5-208ENST00000614547 GOLGA6L22H0YM25 854 aa14.88□□□□□ -0.03
CDH5-208ENST00000614547 FOXD4L5Q5VV16 416 aaPredicted RBP14.88□□□□□ -0.03
CDH5-208ENST00000614547 FOXD4L4Q8WXT5 416 aaPredicted RBP14.88□□□□□ -0.03
CDH5-208ENST00000614547 SLFN5Q08AF3 891 aa14.87□□□□□ -0.03
CDH5-208ENST00000614547 C22orf23Q9BZE7 217 aa14.87□□□□□ -0.03
CDH5-208ENST00000614547 TBC1D2Q9BYX2 928 aa14.87□□□□□ -0.03
CDH5-208ENST00000614547 IQGAP2Q13576 1575 aa14.87□□□□□ -0.03
CDH5-208ENST00000614547 PLEKHG5O94827 1062 aa14.86□□□□□ -0.03
CDH5-208ENST00000614547 CFAP53Q96M91 514 aa14.86□□□□□ -0.03
CDH5-208ENST00000614547 LRPPRCP42704 1394 aaKnown RBP14.86□□□□□ -0.03
CDH5-208ENST00000614547 KIAA0586Q9BVV6 1533 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms