RNA–Protein interactions for RNA: ENST00000612399.4

PSMC6-219, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC6, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-219ENST00000612399 CLSPNQ9HAW4 1339 aa9.5□□□□□ -0.89
PSMC6-219ENST00000612399 CCDC88BA6NC98 1476 aa9.5□□□□□ -0.89
PSMC6-219ENST00000612399 ABCC8Q09428 1581 aa9.49□□□□□ -0.89
PSMC6-219ENST00000612399 ERCC6Q03468 1493 aa9.49□□□□□ -0.89
PSMC6-219ENST00000612399 NESP48681 1621 aa9.48□□□□□ -0.89
PSMC6-219ENST00000612399 KCNK17Q96T54 332 aa9.48□□□□□ -0.89
PSMC6-219ENST00000612399 DSG2Q14126 1118 aa9.46□□□□□ -0.89
PSMC6-219ENST00000612399 CEP164Q9UPV0 1460 aa9.46□□□□□ -0.89
PSMC6-219ENST00000612399 RGS20O76081 388 aa9.46□□□□□ -0.9
PSMC6-219ENST00000612399 CUX2O14529 1486 aa9.45□□□□□ -0.9
PSMC6-219ENST00000612399 VPS9D1Q9Y2B5 631 aa9.45□□□□□ -0.9
PSMC6-219ENST00000612399 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
PSMC6-219ENST00000612399 SLC4A5Q9BY07 1137 aa9.43□□□□□ -0.9
PSMC6-219ENST00000612399 SOGA1O94964 1423 aa9.42□□□□□ -0.9
PSMC6-219ENST00000612399 PTPN5P54829 565 aa9.41□□□□□ -0.9
PSMC6-219ENST00000612399 OXER1Q8TDS5 423 aa9.41□□□□□ -0.9
PSMC6-219ENST00000612399 DNAJC5Q9H3Z4 198 aa9.41□□□□□ -0.9
PSMC6-219ENST00000612399 HS6ST3Q8IZP7 471 aa9.41□□□□□ -0.9
PSMC6-219ENST00000612399 BCL2L12Q9HB09 334 aa9.41□□□□□ -0.9
PSMC6-219ENST00000612399 LAMC3Q9Y6N6 1575 aa9.4□□□□□ -0.9
PSMC6-219ENST00000612399 ZNF454Q8N9F8 522 aa9.4□□□□□ -0.9
PSMC6-219ENST00000612399 VPS8Q8N3P4 1428 aa9.39□□□□□ -0.91
PSMC6-219ENST00000612399 THOC2Q8NI27 1593 aaKnown RBP9.38□□□□□ -0.91
PSMC6-219ENST00000612399 KIF21AQ7Z4S6 1674 aa9.38□□□□□ -0.91
PSMC6-219ENST00000612399 THSD4Q6ZMP0 1018 aa9.37□□□□□ -0.91
PSMC6-219ENST00000612399 GOLGA8CPA6NN73 597 aa9.36□□□□□ -0.91
PSMC6-219ENST00000612399 BHMG1C9JSJ3 638 aaPredicted RBP9.36□□□□□ -0.91
PSMC6-219ENST00000612399 PTPREP23469 700 aa9.36□□□□□ -0.91
PSMC6-219ENST00000612399 CLIP1P30622 1438 aa9.36□□□□□ -0.91
PSMC6-219ENST00000612399 UPF1Q92900 1129 aaKnown RBP eCLIP9.36□□□□□ -0.91
PSMC6-219ENST00000612399 UBTFP17480 764 aaKnown RBP9.35□□□□□ -0.91
PSMC6-219ENST00000612399 FOSBP53539 338 aa9.35□□□□□ -0.91
PSMC6-219ENST00000612399 A0A0G2JS52 829 aa9.34□□□□□ -0.91
PSMC6-219ENST00000612399 IRX2Q9BZI1 471 aaPredicted RBP9.34□□□□□ -0.91
PSMC6-219ENST00000612399 MRPL50Q8N5N7 158 aaKnown RBP9.33□□□□□ -0.92
PSMC6-219ENST00000612399 WNT2BQ93097 391 aa9.33□□□□□ -0.92
PSMC6-219ENST00000612399 ZBED2Q9BTP6 218 aa9.33□□□□□ -0.92
PSMC6-219ENST00000612399 RYDENQ9NUL5 291 aaKnown RBP9.33□□□□□ -0.92
PSMC6-219ENST00000612399 PDS5BQ9NTI5 1447 aa9.33□□□□□ -0.92
PSMC6-219ENST00000612399 ERICH3Q5RHP9 1530 aa9.33□□□□□ -0.92
PSMC6-219ENST00000612399 CRISPLD2Q9H0B8 497 aa9.33□□□□□ -0.92
PSMC6-219ENST00000612399 SYNJ1O43426 1573 aa9.33□□□□□ -0.92
PSMC6-219ENST00000612399 CADPSQ9ULU8 1353 aa9.32□□□□□ -0.92
PSMC6-219ENST00000612399 RUSC2Q8N2Y8 1516 aa9.32□□□□□ -0.92
PSMC6-219ENST00000612399 PPP1R15BQ5SWA1 713 aa9.32□□□□□ -0.92
PSMC6-219ENST00000612399 JPH4Q96JJ6 628 aa9.32□□□□□ -0.92
PSMC6-219ENST00000612399 NBPF3Q9H094 633 aa9.31□□□□□ -0.92
PSMC6-219ENST00000612399 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
PSMC6-219ENST00000612399 BIVM-ERCC5R4GMW8 1640 aa9.29□□□□□ -0.92
PSMC6-219ENST00000612399 ZDHHC16Q969W1 377 aa9.29□□□□□ -0.92
PSMC6-219ENST00000612399 TOP2BQ02880 1626 aa9.28□□□□□ -0.92
PSMC6-219ENST00000612399 CHGAP10645 457 aaKnown RBP9.28□□□□□ -0.92
PSMC6-219ENST00000612399 MRC2Q9UBG0 1479 aa9.26□□□□□ -0.93
PSMC6-219ENST00000612399 PDE4AP27815 886 aa9.26□□□□□ -0.93
PSMC6-219ENST00000612399 EVI5O60447 810 aa9.25□□□□□ -0.93
PSMC6-219ENST00000612399 WDR62O43379 1518 aa9.25□□□□□ -0.93
PSMC6-219ENST00000612399 YTHDC1Q96MU7 727 aaKnown RBP9.24□□□□□ -0.93
PSMC6-219ENST00000612399 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
PSMC6-219ENST00000612399 CFTRP13569 1480 aa9.24□□□□□ -0.93
PSMC6-219ENST00000612399 TTBK1Q5TCY1 1321 aaPredicted RBP9.23□□□□□ -0.93
PSMC6-219ENST00000612399 FANCD2Q9BXW9 1451 aa9.23□□□□□ -0.93
PSMC6-219ENST00000612399 NKX1-1Q15270 411 aaPredicted RBP9.23□□□□□ -0.93
PSMC6-219ENST00000612399 RRBP1Q9P2E9 1410 aaKnown RBP9.23□□□□□ -0.93
PSMC6-219ENST00000612399 RAPGEF2Q9Y4G8 1499 aa9.22□□□□□ -0.93
PSMC6-219ENST00000612399 PPP1R3GB7ZBB8 358 aa9.22□□□□□ -0.93
PSMC6-219ENST00000612399 DHX57Q6P158 1386 aaKnown RBP9.22□□□□□ -0.93
PSMC6-219ENST00000612399 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
PSMC6-219ENST00000612399 ITGBL1O95965 494 aaPredicted RBP9.21□□□□□ -0.93
PSMC6-219ENST00000612399 ANKK1Q8NFD2 765 aa9.21□□□□□ -0.93
PSMC6-219ENST00000612399 RABGEF1Q9UJ41 708 aa9.2□□□□□ -0.94
PSMC6-219ENST00000612399 PRXQ9BXM0 1461 aa9.2□□□□□ -0.94
PSMC6-219ENST00000612399 MAP3K9P80192 1104 aa9.18□□□□□ -0.94
PSMC6-219ENST00000612399 MAP3K1Q13233 1512 aa9.18□□□□□ -0.94
PSMC6-219ENST00000612399 ARAP1Q96P48 1450 aa9.17□□□□□ -0.94
PSMC6-219ENST00000612399 PRDM2Q13029 1718 aa9.17□□□□□ -0.94
PSMC6-219ENST00000612399 NYAP1Q6ZVC0 841 aa9.17□□□□□ -0.94
PSMC6-219ENST00000612399 LAPTM4BQ86VI4 370 aa9.17□□□□□ -0.94
PSMC6-219ENST00000612399 DDX27Q96GQ7 796 aaKnown RBP9.17□□□□□ -0.94
PSMC6-219ENST00000612399 URB2Q14146 1524 aaKnown RBP9.16□□□□□ -0.94
PSMC6-219ENST00000612399 SUPT16HQ9Y5B9 1047 aaKnown RBP9.16□□□□□ -0.94
PSMC6-219ENST00000612399 LARP6Q9BRS8 491 aaKnown RBP9.16□□□□□ -0.94
PSMC6-219ENST00000612399 PROX2Q3B8N5 592 aa9.15□□□□□ -0.95
PSMC6-219ENST00000612399 FBXW7Q969H0 707 aa9.15□□□□□ -0.95
PSMC6-219ENST00000612399 PCDHGA10Q9Y5H3 936 aa9.15□□□□□ -0.95
PSMC6-219ENST00000612399 SOWAHBA6NEL2 793 aa9.14□□□□□ -0.95
PSMC6-219ENST00000612399 MFSD10Q14728 455 aa9.14□□□□□ -0.95
PSMC6-219ENST00000612399 BCAMP50895 628 aa9.13□□□□□ -0.95
PSMC6-219ENST00000612399 TYW1BQ6NUM6 668 aa9.13□□□□□ -0.95
PSMC6-219ENST00000612399 ONECUT3O60422 494 aaPredicted RBP9.12□□□□□ -0.95
PSMC6-219ENST00000612399 COL9A1P20849 921 aa9.12□□□□□ -0.95
PSMC6-219ENST00000612399 PHF14O94880 888 aa9.12□□□□□ -0.95
PSMC6-219ENST00000612399 Q6ZNB5 142 aa9.12□□□□□ -0.95
PSMC6-219ENST00000612399 CCNB3Q8WWL7 1395 aa9.11□□□□□ -0.95
PSMC6-219ENST00000612399 KIF27Q86VH2 1401 aa9.11□□□□□ -0.95
PSMC6-219ENST00000612399 KCNC4Q03721 635 aa9.1□□□□□ -0.95
PSMC6-219ENST00000612399 ZFRQ96KR1 1074 aaKnown RBP9.1□□□□□ -0.95
PSMC6-219ENST00000612399 EMILIN3Q9NT22 766 aa9.1□□□□□ -0.95
PSMC6-219ENST00000612399 TIMELESSQ9UNS1 1208 aa9.1□□□□□ -0.95
PSMC6-219ENST00000612399 KIAA1468Q9P260 1216 aa9.09□□□□□ -0.95
PSMC6-219ENST00000612399 TIAM1Q13009 1591 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms