RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 TSR3Q9UJK0 312 aaKnown RBP8.16□□□□□ -1.1
ITGB5-213ENST00000608945 HPS5Q9UPZ3 1129 aa8.16□□□□□ -1.1
ITGB5-213ENST00000608945 FAM187AA6NFU0 413 aa8.15□□□□□ -1.1
ITGB5-213ENST00000608945 MFRPQ9BY79 579 aa8.15□□□□□ -1.1
ITGB5-213ENST00000608945 ADAM33Q9BZ11 813 aa8.15□□□□□ -1.1
ITGB5-213ENST00000608945 PRR20EP86478 221 aa8.14□□□□□ -1.11
ITGB5-213ENST00000608945 PRR20CP86479 221 aa8.14□□□□□ -1.11
ITGB5-213ENST00000608945 PRR20DP86480 221 aa8.14□□□□□ -1.11
ITGB5-213ENST00000608945 PRR20BP86481 221 aa8.14□□□□□ -1.11
ITGB5-213ENST00000608945 PRR20AP86496 221 aa8.14□□□□□ -1.11
ITGB5-213ENST00000608945 EMID1Q96A84 441 aaPredicted RBP8.14□□□□□ -1.11
ITGB5-213ENST00000608945 TBC1D12O60347 775 aa8.13□□□□□ -1.11
ITGB5-213ENST00000608945 PLPP6Q8IY26 295 aa8.13□□□□□ -1.11
ITGB5-213ENST00000608945 KCTD17Q8N5Z5 321 aa8.12□□□□□ -1.11
ITGB5-213ENST00000608945 GMPR2Q9P2T1 348 aaKnown RBP8.12□□□□□ -1.11
ITGB5-213ENST00000608945 MTRQ99707 1265 aa8.11□□□□□ -1.11
ITGB5-213ENST00000608945 FOXK1P85037 733 aa8.1□□□□□ -1.11
ITGB5-213ENST00000608945 ZNF516Q92618 1163 aa8.1□□□□□ -1.11
ITGB5-213ENST00000608945 C11orf95C9JLR9 678 aaPredicted RBP8.08□□□□□ -1.12
ITGB5-213ENST00000608945 IL21Q9HBE4 155 aa8.08□□□□□ -1.12
ITGB5-213ENST00000608945 PPP1R3GB7ZBB8 358 aa8.07□□□□□ -1.12
ITGB5-213ENST00000608945 TERTO14746 1132 aaKnown RBP8.07□□□□□ -1.12
ITGB5-213ENST00000608945 NKX2-3Q8TAU0 364 aa8.07□□□□□ -1.12
ITGB5-213ENST00000608945 RNF25Q96BH1 459 aaPredicted RBP8.07□□□□□ -1.12
ITGB5-213ENST00000608945 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.07□□□□□ -1.12
ITGB5-213ENST00000608945 SEPT9Q9UHD8 586 aaPredicted RBP8.07□□□□□ -1.12
ITGB5-213ENST00000608945 COL9A1P20849 921 aa8.06□□□□□ -1.12
ITGB5-213ENST00000608945 VASPP50552 380 aaPredicted RBP8.06□□□□□ -1.12
ITGB5-213ENST00000608945 ZSCAN1Q8NBB4 408 aa8.06□□□□□ -1.12
ITGB5-213ENST00000608945 GSK3AP49840 483 aa8.05□□□□□ -1.12
ITGB5-213ENST00000608945 PSMG3-AS1Q96PY0 264 aa8.05□□□□□ -1.12
ITGB5-213ENST00000608945 OXER1Q8TDS5 423 aa8.04□□□□□ -1.12
ITGB5-213ENST00000608945 ZDHHC16Q969W1 377 aa8.04□□□□□ -1.12
ITGB5-213ENST00000608945 JPH4Q96JJ6 628 aa8.04□□□□□ -1.12
ITGB5-213ENST00000608945 KIAA1468Q9P260 1216 aa8.04□□□□□ -1.12
ITGB5-213ENST00000608945 CRIPAKQ8N1N5 446 aa8.03□□□□□ -1.12
ITGB5-213ENST00000608945 LRCH3Q96II8 777 aa8.03□□□□□ -1.12
ITGB5-213ENST00000608945 TNFRSF10AO00220 468 aa8.01□□□□□ -1.13
ITGB5-213ENST00000608945 RIOK3O14730 519 aaKnown RBP8.01□□□□□ -1.13
ITGB5-213ENST00000608945 GDF9O60383 454 aa8.01□□□□□ -1.13
ITGB5-213ENST00000608945 DSG2Q14126 1118 aa8.01□□□□□ -1.13
ITGB5-213ENST00000608945 SPRYD7Q5W111 196 aa8.01□□□□□ -1.13
ITGB5-213ENST00000608945 SLC19A1P41440 591 aa8□□□□□ -1.13
ITGB5-213ENST00000608945 ZNF598Q86UK7 904 aaKnown RBP7.99□□□□□ -1.13
ITGB5-213ENST00000608945 VGFO15240 615 aaPredicted RBP7.98□□□□□ -1.13
ITGB5-213ENST00000608945 SPOCK2Q92563 424 aa7.98□□□□□ -1.13
ITGB5-213ENST00000608945 FAM98CQ17RN3 349 aaKnown RBP7.97□□□□□ -1.13
ITGB5-213ENST00000608945 UPF1Q92900 1129 aaKnown RBP eCLIP7.97□□□□□ -1.13
ITGB5-213ENST00000608945 FBXO3Q9UK99 471 aa7.97□□□□□ -1.13
ITGB5-213ENST00000608945 TMUB1Q9BVT8 246 aa7.95□□□□□ -1.14
ITGB5-213ENST00000608945 ANO8Q9HCE9 1232 aaPredicted RBP7.95□□□□□ -1.14
ITGB5-213ENST00000608945 GMPRP36959 345 aa7.94□□□□□ -1.14
ITGB5-213ENST00000608945 GGCXP38435 758 aa7.94□□□□□ -1.14
ITGB5-213ENST00000608945 PPP4CP60510 307 aa7.94□□□□□ -1.14
ITGB5-213ENST00000608945 TRIM41Q8WV44 630 aa7.94□□□□□ -1.14
ITGB5-213ENST00000608945 SNRPBP14678 240 aaKnown RBP7.93□□□□□ -1.14
ITGB5-213ENST00000608945 KCNMA1Q12791 1236 aa7.93□□□□□ -1.14
ITGB5-213ENST00000608945 LCE3BQ5TA77 95 aa7.93□□□□□ -1.14
ITGB5-213ENST00000608945 GPHNQ9NQX3 736 aaPredicted RBP7.93□□□□□ -1.14
ITGB5-213ENST00000608945 PPP1R37O75864 691 aa7.92□□□□□ -1.14
ITGB5-213ENST00000608945 ZNF697Q5TEC3 545 aa7.92□□□□□ -1.14
ITGB5-213ENST00000608945 BCL11BQ9C0K0 894 aaPredicted RBP7.91□□□□□ -1.14
ITGB5-213ENST00000608945 AVPP01185 164 aa7.9□□□□□ -1.14
ITGB5-213ENST00000608945 KRTAP9-9Q9BYP9 154 aa7.9□□□□□ -1.14
ITGB5-213ENST00000608945 KRTAP9-4Q9BYQ2 154 aa7.9□□□□□ -1.14
ITGB5-213ENST00000608945 ONECUT3O60422 494 aaPredicted RBP7.89□□□□□ -1.15
ITGB5-213ENST00000608945 RNF223E7ERA6 249 aa7.88□□□□□ -1.15
ITGB5-213ENST00000608945 LIAT1Q6ZQX7 453 aa7.88□□□□□ -1.15
ITGB5-213ENST00000608945 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
ITGB5-213ENST00000608945 AXIN1O15169 862 aa7.86□□□□□ -1.15
ITGB5-213ENST00000608945 IFNLR1Q8IU57 520 aaPredicted RBP7.85□□□□□ -1.15
ITGB5-213ENST00000608945 TRIM6-TRIM34B2RNG4 842 aa7.82□□□□□ -1.16
ITGB5-213ENST00000608945 FKBP8Q14318 412 aa7.82□□□□□ -1.16
ITGB5-213ENST00000608945 KRTAP4-12Q9BQ66 201 aa7.82□□□□□ -1.16
ITGB5-213ENST00000608945 PCDHGA10Q9Y5H3 936 aa7.82□□□□□ -1.16
ITGB5-213ENST00000608945 STK24Q9Y6E0 443 aa7.82□□□□□ -1.16
ITGB5-213ENST00000608945 SMCPP49901 116 aaPredicted RBP7.81□□□□□ -1.16
ITGB5-213ENST00000608945 APLP1P51693 650 aa7.81□□□□□ -1.16
ITGB5-213ENST00000608945 TMEM151AQ8N4L1 468 aa7.81□□□□□ -1.16
ITGB5-213ENST00000608945 EVI5O60447 810 aa7.8□□□□□ -1.16
ITGB5-213ENST00000608945 PKD2L1Q9P0L9 805 aa7.8□□□□□ -1.16
ITGB5-213ENST00000608945 CTC1Q2NKJ3 1217 aa7.79□□□□□ -1.16
ITGB5-213ENST00000608945 TRIM47Q96LD4 638 aa7.79□□□□□ -1.16
ITGB5-213ENST00000608945 SAMD7Q7Z3H4 446 aa7.78□□□□□ -1.16
ITGB5-213ENST00000608945 GDF11O95390 407 aa7.77□□□□□ -1.17
ITGB5-213ENST00000608945 COPS2P61201 443 aa7.77□□□□□ -1.17
ITGB5-213ENST00000608945 RASSF7Q02833 373 aa7.76□□□□□ -1.17
ITGB5-213ENST00000608945 SLC16A10Q8TF71 515 aa7.76□□□□□ -1.17
ITGB5-213ENST00000608945 ATP13A2Q9NQ11 1180 aa7.76□□□□□ -1.17
ITGB5-213ENST00000608945 PPEF1O14829 653 aaPredicted RBP7.74□□□□□ -1.17
ITGB5-213ENST00000608945 ANKLE1Q8NAG6 615 aa7.74□□□□□ -1.17
ITGB5-213ENST00000608945 TOR4AQ9NXH8 423 aa7.74□□□□□ -1.17
ITGB5-213ENST00000608945 ERBB4Q15303 1308 aa7.73□□□□□ -1.17
ITGB5-213ENST00000608945 ZPR1O75312 459 aa7.72□□□□□ -1.17
ITGB5-213ENST00000608945 IRF7Q92985 503 aa7.72□□□□□ -1.17
ITGB5-213ENST00000608945 FOXC1Q12948 553 aa7.7□□□□□ -1.18
ITGB5-213ENST00000608945 NXF1Q9UBU9 619 aaKnown RBP7.7□□□□□ -1.18
ITGB5-213ENST00000608945 PLA2G2CQ5R387 149 aa7.69□□□□□ -1.18
ITGB5-213ENST00000608945 GPAT2Q6NUI2 795 aa7.68□□□□□ -1.18
ITGB5-213ENST00000608945 LMOD2Q6P5Q4 547 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms