RNA–Protein interactions for RNA: ENST00000602632.1

UBE2E3-208, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2 BASIC

Gene UBE2E3, Length 446 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-208ENST00000602632 DSG2Q14126 1118 aa11.77□□□□□ -0.53
UBE2E3-208ENST00000602632 BCAMP50895 628 aa11.75□□□□□ -0.53
UBE2E3-208ENST00000602632 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
UBE2E3-208ENST00000602632 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
UBE2E3-208ENST00000602632 PPP1R3GB7ZBB8 358 aa11.72□□□□□ -0.53
UBE2E3-208ENST00000602632 PPP1R37O75864 691 aa11.72□□□□□ -0.53
UBE2E3-208ENST00000602632 PRKD2Q9BZL6 878 aa11.7□□□□□ -0.54
UBE2E3-208ENST00000602632 CUX2O14529 1486 aa11.7□□□□□ -0.54
UBE2E3-208ENST00000602632 WBP1LQ9NX94 342 aa11.69□□□□□ -0.54
UBE2E3-208ENST00000602632 ERCC6Q03468 1493 aa11.68□□□□□ -0.54
UBE2E3-208ENST00000602632 ADAM33Q9BZ11 813 aa11.67□□□□□ -0.54
UBE2E3-208ENST00000602632 ANO8Q9HCE9 1232 aaPredicted RBP11.67□□□□□ -0.54
UBE2E3-208ENST00000602632 NCAPD3P42695 1498 aa11.66□□□□□ -0.54
UBE2E3-208ENST00000602632 UPF1Q92900 1129 aaKnown RBP eCLIP11.66□□□□□ -0.54
UBE2E3-208ENST00000602632 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
UBE2E3-208ENST00000602632 TSR3Q9UJK0 312 aaKnown RBP11.62□□□□□ -0.55
UBE2E3-208ENST00000602632 ONECUT3O60422 494 aaPredicted RBP11.61□□□□□ -0.55
UBE2E3-208ENST00000602632 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
UBE2E3-208ENST00000602632 ATAD2BQ9ULI0 1458 aa11.6□□□□□ -0.55
UBE2E3-208ENST00000602632 SMARCA2P51531 1590 aa11.59□□□□□ -0.55
UBE2E3-208ENST00000602632 PROX2Q3B8N5 592 aa11.58□□□□□ -0.56
UBE2E3-208ENST00000602632 SMARCA4P51532 1647 aa11.57□□□□□ -0.56
UBE2E3-208ENST00000602632 HMGXB3Q12766 1538 aa11.57□□□□□ -0.56
UBE2E3-208ENST00000602632 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.56□□□□□ -0.56
UBE2E3-208ENST00000602632 EVI5O60447 810 aa11.55□□□□□ -0.56
UBE2E3-208ENST00000602632 LRCH3Q96II8 777 aa11.55□□□□□ -0.56
UBE2E3-208ENST00000602632 HPS5Q9UPZ3 1129 aa11.55□□□□□ -0.56
UBE2E3-208ENST00000602632 FAM98CQ17RN3 349 aaKnown RBP11.53□□□□□ -0.56
UBE2E3-208ENST00000602632 KIAA1468Q9P260 1216 aa11.53□□□□□ -0.56
UBE2E3-208ENST00000602632 NESP48681 1621 aa11.52□□□□□ -0.57
UBE2E3-208ENST00000602632 FBXW7Q969H0 707 aa11.51□□□□□ -0.57
UBE2E3-208ENST00000602632 BAZ1AQ9NRL2 1556 aaPredicted RBP11.5□□□□□ -0.57
UBE2E3-208ENST00000602632 PPP1R15BQ5SWA1 713 aa11.5□□□□□ -0.57
UBE2E3-208ENST00000602632 PPP1R18Q6NYC8 613 aa11.5□□□□□ -0.57
UBE2E3-208ENST00000602632 BAZ1BQ9UIG0 1483 aaKnown RBP11.5□□□□□ -0.57
UBE2E3-208ENST00000602632 COL9A1P20849 921 aa11.48□□□□□ -0.57
UBE2E3-208ENST00000602632 TJAP1Q5JTD0 557 aa11.48□□□□□ -0.57
UBE2E3-208ENST00000602632 TREML4Q6UXN2 200 aa11.48□□□□□ -0.57
UBE2E3-208ENST00000602632 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.47□□□□□ -0.57
UBE2E3-208ENST00000602632 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.57
UBE2E3-208ENST00000602632 IL21Q9HBE4 155 aa11.46□□□□□ -0.57
UBE2E3-208ENST00000602632 THOC2Q8NI27 1593 aaKnown RBP11.45□□□□□ -0.58
UBE2E3-208ENST00000602632 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
UBE2E3-208ENST00000602632 STK17AQ9UEE5 414 aa11.45□□□□□ -0.58
UBE2E3-208ENST00000602632 SEPT9Q9UHD8 586 aaPredicted RBP11.45□□□□□ -0.58
UBE2E3-208ENST00000602632 PEG3Q9GZU2 1588 aa11.45□□□□□ -0.58
UBE2E3-208ENST00000602632 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
UBE2E3-208ENST00000602632 PPP4CP60510 307 aa11.43□□□□□ -0.58
UBE2E3-208ENST00000602632 TYW1BQ6NUM6 668 aa11.43□□□□□ -0.58
UBE2E3-208ENST00000602632 PCDHGA10Q9Y5H3 936 aa11.43□□□□□ -0.58
UBE2E3-208ENST00000602632 KIF21AQ7Z4S6 1674 aa11.43□□□□□ -0.58
UBE2E3-208ENST00000602632 GGCXP38435 758 aa11.42□□□□□ -0.58
UBE2E3-208ENST00000602632 DGAT1O75907 488 aa11.41□□□□□ -0.58
UBE2E3-208ENST00000602632 PKDCCQ504Y2 493 aa11.41□□□□□ -0.58
UBE2E3-208ENST00000602632 LCE2AQ5TA79 106 aaPredicted RBP11.41□□□□□ -0.58
UBE2E3-208ENST00000602632 TRIM6-TRIM34B2RNG4 842 aa11.4□□□□□ -0.58
UBE2E3-208ENST00000602632 PDS5BQ9NTI5 1447 aa11.4□□□□□ -0.58
UBE2E3-208ENST00000602632 PHF14O94880 888 aa11.39□□□□□ -0.59
UBE2E3-208ENST00000602632 MAP3K9P80192 1104 aa11.38□□□□□ -0.59
UBE2E3-208ENST00000602632 MTRQ99707 1265 aa11.38□□□□□ -0.59
UBE2E3-208ENST00000602632 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
UBE2E3-208ENST00000602632 MYT1Q01538 1121 aa11.37□□□□□ -0.59
UBE2E3-208ENST00000602632 LOC100996750A0A140TA64 210 aa11.36□□□□□ -0.59
UBE2E3-208ENST00000602632 KRTAP4-6Q9BYQ5 205 aa11.36□□□□□ -0.59
UBE2E3-208ENST00000602632 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
UBE2E3-208ENST00000602632 PDE4AP27815 886 aa11.34□□□□□ -0.59
UBE2E3-208ENST00000602632 RYDENQ9NUL5 291 aaKnown RBP11.32□□□□□ -0.6
UBE2E3-208ENST00000602632 CADPSQ9ULU8 1353 aa11.31□□□□□ -0.6
UBE2E3-208ENST00000602632 RGL2O15211 777 aa11.31□□□□□ -0.6
UBE2E3-208ENST00000602632 INSM1Q01101 510 aaPredicted RBP11.31□□□□□ -0.6
UBE2E3-208ENST00000602632 C6orf132Q5T0Z8 1188 aa11.31□□□□□ -0.6
UBE2E3-208ENST00000602632 EPAS1Q99814 870 aa11.3□□□□□ -0.6
UBE2E3-208ENST00000602632 POTECB2RU33 542 aa11.29□□□□□ -0.6
UBE2E3-208ENST00000602632 PRR20EP86478 221 aa11.29□□□□□ -0.6
UBE2E3-208ENST00000602632 PRR20CP86479 221 aa11.29□□□□□ -0.6
UBE2E3-208ENST00000602632 PRR20DP86480 221 aa11.29□□□□□ -0.6
UBE2E3-208ENST00000602632 PRR20BP86481 221 aa11.29□□□□□ -0.6
UBE2E3-208ENST00000602632 PRR20AP86496 221 aa11.29□□□□□ -0.6
UBE2E3-208ENST00000602632 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
UBE2E3-208ENST00000602632 MRC2Q9UBG0 1479 aa11.29□□□□□ -0.6
UBE2E3-208ENST00000602632 WIZO95785 1651 aa11.27□□□□□ -0.6
UBE2E3-208ENST00000602632 TRIM67Q6ZTA4 783 aa11.27□□□□□ -0.61
UBE2E3-208ENST00000602632 WDR62O43379 1518 aa11.25□□□□□ -0.61
UBE2E3-208ENST00000602632 WFS1O76024 890 aa11.24□□□□□ -0.61
UBE2E3-208ENST00000602632 WIPF1O43516 503 aa11.23□□□□□ -0.61
UBE2E3-208ENST00000602632 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
UBE2E3-208ENST00000602632 ZNF516Q92618 1163 aa11.23□□□□□ -0.61
UBE2E3-208ENST00000602632 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
UBE2E3-208ENST00000602632 NCKAP5LQ9HCH0 1330 aa11.23□□□□□ -0.61
UBE2E3-208ENST00000602632 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
UBE2E3-208ENST00000602632 CEP164Q9UPV0 1460 aa11.22□□□□□ -0.61
UBE2E3-208ENST00000602632 SAMD7Q7Z3H4 446 aa11.21□□□□□ -0.61
UBE2E3-208ENST00000602632 SLC19A1P41440 591 aa11.2□□□□□ -0.62
UBE2E3-208ENST00000602632 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
UBE2E3-208ENST00000602632 ZNF598Q86UK7 904 aaKnown RBP11.17□□□□□ -0.62
UBE2E3-208ENST00000602632 FAM187AA6NFU0 413 aa11.16□□□□□ -0.62
UBE2E3-208ENST00000602632 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
UBE2E3-208ENST00000602632 SPRYD7Q5W111 196 aa11.15□□□□□ -0.62
UBE2E3-208ENST00000602632 CFTRP13569 1480 aa11.14□□□□□ -0.63
UBE2E3-208ENST00000602632 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms