RNA–Protein interactions for RNA: ENST00000599851.1

ZNF728-202, Transcript of zinc finger protein 728, humanhuman

TSL 1 (best)

Gene ZNF728, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728-202ENST00000599851 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
ZNF728-202ENST00000599851 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
ZNF728-202ENST00000599851 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
ZNF728-202ENST00000599851 NCKAP5LQ9HCH0 1330 aa12.1□□□□□ -0.47
ZNF728-202ENST00000599851 ANKRD13DQ6ZTN6 518 aa12.09□□□□□ -0.47
ZNF728-202ENST00000599851 OXER1Q8TDS5 423 aa12.09□□□□□ -0.47
ZNF728-202ENST00000599851 RNF166Q96A37 237 aaPredicted RBP12.09□□□□□ -0.47
ZNF728-202ENST00000599851 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
ZNF728-202ENST00000599851 EIF4G3O43432 1585 aaKnown RBP12.09□□□□□ -0.47
ZNF728-202ENST00000599851 RAD54L2Q9Y4B4 1467 aa12.08□□□□□ -0.48
ZNF728-202ENST00000599851 ZNF608Q9ULD9 1512 aaPredicted RBP12.07□□□□□ -0.48
ZNF728-202ENST00000599851 SYNJ1O43426 1573 aa12.07□□□□□ -0.48
ZNF728-202ENST00000599851 PPP4R3BQ5MIZ7 849 aa12.07□□□□□ -0.48
ZNF728-202ENST00000599851 DDX27Q96GQ7 796 aaKnown RBP12.07□□□□□ -0.48
ZNF728-202ENST00000599851 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
ZNF728-202ENST00000599851 LARP6Q9BRS8 491 aaKnown RBP12.05□□□□□ -0.48
ZNF728-202ENST00000599851 ARHGAP33O14559 1287 aa12.04□□□□□ -0.48
ZNF728-202ENST00000599851 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
ZNF728-202ENST00000599851 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
ZNF728-202ENST00000599851 MFSD10Q14728 455 aa12.03□□□□□ -0.48
ZNF728-202ENST00000599851 AQRO60306 1485 aaKnown RBP eCLIP12.02□□□□□ -0.48
ZNF728-202ENST00000599851 KCNH8Q96L42 1107 aa12.02□□□□□ -0.49
ZNF728-202ENST00000599851 TDRD9Q8NDG6 1382 aaKnown RBP12.02□□□□□ -0.49
ZNF728-202ENST00000599851 POTEEQ6S8J3 1075 aa12.01□□□□□ -0.49
ZNF728-202ENST00000599851 AXIN2Q9Y2T1 843 aa12.01□□□□□ -0.49
ZNF728-202ENST00000599851 GRIN2BQ13224 1484 aa12□□□□□ -0.49
ZNF728-202ENST00000599851 GAPVD1Q14C86 1478 aa11.99□□□□□ -0.49
ZNF728-202ENST00000599851 PBRM1Q86U86 1689 aa11.97□□□□□ -0.49
ZNF728-202ENST00000599851 ABCA5Q8WWZ7 1642 aa11.97□□□□□ -0.49
ZNF728-202ENST00000599851 MAGI1Q96QZ7 1491 aaPredicted RBP11.97□□□□□ -0.49
ZNF728-202ENST00000599851 TK2O00142 265 aa11.96□□□□□ -0.49
ZNF728-202ENST00000599851 SNAPC4Q5SXM2 1469 aa11.95□□□□□ -0.5
ZNF728-202ENST00000599851 ADGRD1Q6QNK2 874 aa11.95□□□□□ -0.5
ZNF728-202ENST00000599851 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.95□□□□□ -0.5
ZNF728-202ENST00000599851 MAP3K9P80192 1104 aa11.94□□□□□ -0.5
ZNF728-202ENST00000599851 ZNF454Q8N9F8 522 aa11.94□□□□□ -0.5
ZNF728-202ENST00000599851 RTN4Q9NQC3 1192 aaKnown RBP11.94□□□□□ -0.5
ZNF728-202ENST00000599851 EVI5O60447 810 aa11.93□□□□□ -0.5
ZNF728-202ENST00000599851 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
ZNF728-202ENST00000599851 ANO8Q9HCE9 1232 aaPredicted RBP11.92□□□□□ -0.5
ZNF728-202ENST00000599851 CHD1O14646 1710 aa11.91□□□□□ -0.5
ZNF728-202ENST00000599851 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
ZNF728-202ENST00000599851 SYNJ2O15056 1496 aa11.91□□□□□ -0.5
ZNF728-202ENST00000599851 PSEN2P49810 448 aa11.91□□□□□ -0.5
ZNF728-202ENST00000599851 CHMP7Q8WUX9 453 aaPredicted RBP11.91□□□□□ -0.5
ZNF728-202ENST00000599851 JPH4Q96JJ6 628 aa11.91□□□□□ -0.5
ZNF728-202ENST00000599851 KCNK17Q96T54 332 aa11.91□□□□□ -0.5
ZNF728-202ENST00000599851 KIF27Q86VH2 1401 aa11.91□□□□□ -0.5
ZNF728-202ENST00000599851 FOSBP53539 338 aa11.9□□□□□ -0.5
ZNF728-202ENST00000599851 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
ZNF728-202ENST00000599851 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
ZNF728-202ENST00000599851 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
ZNF728-202ENST00000599851 EMILIN3Q9NT22 766 aa11.88□□□□□ -0.51
ZNF728-202ENST00000599851 ADAMTS12P58397 1594 aa11.88□□□□□ -0.51
ZNF728-202ENST00000599851 FHAD1B1AJZ9 1412 aa11.86□□□□□ -0.51
ZNF728-202ENST00000599851 PTPREP23469 700 aa11.86□□□□□ -0.51
ZNF728-202ENST00000599851 ZDHHC16Q969W1 377 aa11.85□□□□□ -0.51
ZNF728-202ENST00000599851 STAC3Q96MF2 364 aa11.85□□□□□ -0.51
ZNF728-202ENST00000599851 HRO43593 1189 aa11.84□□□□□ -0.51
ZNF728-202ENST00000599851 CAMK2BQ13554 666 aa11.84□□□□□ -0.51
ZNF728-202ENST00000599851 CUL7Q14999 1698 aa11.84□□□□□ -0.51
ZNF728-202ENST00000599851 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
ZNF728-202ENST00000599851 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
ZNF728-202ENST00000599851 HCSTQ9UBK5 93 aa11.8□□□□□ -0.52
ZNF728-202ENST00000599851 VPS9D1Q9Y2B5 631 aa11.8□□□□□ -0.52
ZNF728-202ENST00000599851 FBXW7Q969H0 707 aa11.79□□□□□ -0.52
ZNF728-202ENST00000599851 IGF1RP08069 1367 aa11.79□□□□□ -0.52
ZNF728-202ENST00000599851 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
ZNF728-202ENST00000599851 ADAM33Q9BZ11 813 aa11.78□□□□□ -0.52
ZNF728-202ENST00000599851 PHF14O94880 888 aa11.77□□□□□ -0.53
ZNF728-202ENST00000599851 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
ZNF728-202ENST00000599851 TYW1BQ6NUM6 668 aa11.76□□□□□ -0.53
ZNF728-202ENST00000599851 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
ZNF728-202ENST00000599851 CARMIL1Q5VZK9 1371 aa11.76□□□□□ -0.53
ZNF728-202ENST00000599851 NUP160Q12769 1436 aa11.76□□□□□ -0.53
ZNF728-202ENST00000599851 DPYSL4O14531 572 aa11.75□□□□□ -0.53
ZNF728-202ENST00000599851 ZBED2Q9BTP6 218 aa11.75□□□□□ -0.53
ZNF728-202ENST00000599851 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
ZNF728-202ENST00000599851 EEA1Q15075 1411 aa11.75□□□□□ -0.53
ZNF728-202ENST00000599851 ARHGEF11O15085 1522 aa11.75□□□□□ -0.53
ZNF728-202ENST00000599851 CEP170Q5SW79 1584 aa11.75□□□□□ -0.53
ZNF728-202ENST00000599851 RIMBP3CA6NJZ7 1639 aa11.74□□□□□ -0.53
ZNF728-202ENST00000599851 RIMBP3BA6NNM3 1639 aa11.74□□□□□ -0.53
ZNF728-202ENST00000599851 RIMBP3Q9UFD9 1639 aa11.74□□□□□ -0.53
ZNF728-202ENST00000599851 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
ZNF728-202ENST00000599851 EPAS1Q99814 870 aa11.73□□□□□ -0.53
ZNF728-202ENST00000599851 MYT1Q01538 1121 aa11.72□□□□□ -0.53
ZNF728-202ENST00000599851 RAPGEF2Q9Y4G8 1499 aa11.71□□□□□ -0.53
ZNF728-202ENST00000599851 KCTD12Q96CX2 325 aaKnown RBP11.71□□□□□ -0.53
ZNF728-202ENST00000599851 NBPF3Q9H094 633 aa11.71□□□□□ -0.53
ZNF728-202ENST00000599851 WDR70Q9NW82 654 aa11.71□□□□□ -0.53
ZNF728-202ENST00000599851 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
ZNF728-202ENST00000599851 GOLGA8CPA6NN73 597 aa11.68□□□□□ -0.54
ZNF728-202ENST00000599851 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
ZNF728-202ENST00000599851 BHMG1C9JSJ3 638 aaPredicted RBP11.68□□□□□ -0.54
ZNF728-202ENST00000599851 E2F4Q16254 413 aa11.68□□□□□ -0.54
ZNF728-202ENST00000599851 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
ZNF728-202ENST00000599851 KIAA0586Q9BVV6 1533 aa11.68□□□□□ -0.54
ZNF728-202ENST00000599851 PDIA6Q15084 440 aa11.67□□□□□ -0.54
ZNF728-202ENST00000599851 SHROOM2Q13796 1616 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms