RNA–Protein interactions for RNA: ENST00000593336.3

LINC01828-204, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-204ENST00000593336 JPH4Q96JJ6 628 aa9.48□□□□□ -0.89
LINC01828-204ENST00000593336 PTPREP23469 700 aa9.46□□□□□ -0.9
LINC01828-204ENST00000593336 GTPBP6O43824 516 aaPredicted RBP9.45□□□□□ -0.9
LINC01828-204ENST00000593336 BHMG1C9JSJ3 638 aaPredicted RBP9.44□□□□□ -0.9
LINC01828-204ENST00000593336 MFSD10Q14728 455 aa9.44□□□□□ -0.9
LINC01828-204ENST00000593336 IFFO2Q5TF58 517 aa9.44□□□□□ -0.9
LINC01828-204ENST00000593336 EVI5O60447 810 aa9.43□□□□□ -0.9
LINC01828-204ENST00000593336 ZDHHC16Q969W1 377 aa9.43□□□□□ -0.9
LINC01828-204ENST00000593336 DDX27Q96GQ7 796 aaKnown RBP9.43□□□□□ -0.9
LINC01828-204ENST00000593336 ZBED2Q9BTP6 218 aa9.43□□□□□ -0.9
LINC01828-204ENST00000593336 RGS20O76081 388 aa9.41□□□□□ -0.9
LINC01828-204ENST00000593336 LARP6Q9BRS8 491 aaKnown RBP9.41□□□□□ -0.9
LINC01828-204ENST00000593336 THSD4Q6ZMP0 1018 aa9.39□□□□□ -0.91
LINC01828-204ENST00000593336 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
LINC01828-204ENST00000593336 CADPSQ9ULU8 1353 aa9.38□□□□□ -0.91
LINC01828-204ENST00000593336 MRPL50Q8N5N7 158 aaKnown RBP9.38□□□□□ -0.91
LINC01828-204ENST00000593336 ADAM33Q9BZ11 813 aa9.38□□□□□ -0.91
LINC01828-204ENST00000593336 CFTRP13569 1480 aa9.38□□□□□ -0.91
LINC01828-204ENST00000593336 MAP3K9P80192 1104 aa9.37□□□□□ -0.91
LINC01828-204ENST00000593336 GOLGA8CPA6NN73 597 aa9.36□□□□□ -0.91
LINC01828-204ENST00000593336 FBXW7Q969H0 707 aa9.36□□□□□ -0.91
LINC01828-204ENST00000593336 PPP1R3GB7ZBB8 358 aa9.35□□□□□ -0.91
LINC01828-204ENST00000593336 PTPN5P54829 565 aa9.35□□□□□ -0.91
LINC01828-204ENST00000593336 WNT2BQ93097 391 aa9.35□□□□□ -0.91
LINC01828-204ENST00000593336 EMILIN3Q9NT22 766 aa9.34□□□□□ -0.91
LINC01828-204ENST00000593336 RABGEF1Q9UJ41 708 aa9.33□□□□□ -0.92
LINC01828-204ENST00000593336 NESP48681 1621 aa9.33□□□□□ -0.92
LINC01828-204ENST00000593336 PHF14O94880 888 aa9.32□□□□□ -0.92
LINC01828-204ENST00000593336 PCDHGA10Q9Y5H3 936 aa9.32□□□□□ -0.92
LINC01828-204ENST00000593336 TYW1BQ6NUM6 668 aa9.3□□□□□ -0.92
LINC01828-204ENST00000593336 LAPTM4BQ86VI4 370 aa9.3□□□□□ -0.92
LINC01828-204ENST00000593336 ONECUT3O60422 494 aaPredicted RBP9.29□□□□□ -0.92
LINC01828-204ENST00000593336 CAMK2BQ13554 666 aa9.29□□□□□ -0.92
LINC01828-204ENST00000593336 A0A0G2JS52 829 aa9.28□□□□□ -0.92
LINC01828-204ENST00000593336 NYAP1Q6ZVC0 841 aa9.27□□□□□ -0.93
LINC01828-204ENST00000593336 ANKK1Q8NFD2 765 aa9.27□□□□□ -0.93
LINC01828-204ENST00000593336 EPAS1Q99814 870 aa9.27□□□□□ -0.93
LINC01828-204ENST00000593336 LAMC3Q9Y6N6 1575 aa9.27□□□□□ -0.93
LINC01828-204ENST00000593336 ITGBL1O95965 494 aaPredicted RBP9.25□□□□□ -0.93
LINC01828-204ENST00000593336 COL9A1P20849 921 aa9.25□□□□□ -0.93
LINC01828-204ENST00000593336 CADPS2Q86UW7 1296 aa9.25□□□□□ -0.93
LINC01828-204ENST00000593336 FANCD2Q9BXW9 1451 aa9.24□□□□□ -0.93
LINC01828-204ENST00000593336 PDS5BQ9NTI5 1447 aa9.23□□□□□ -0.93
LINC01828-204ENST00000593336 PROX2Q3B8N5 592 aa9.23□□□□□ -0.93
LINC01828-204ENST00000593336 ABCC8Q09428 1581 aa9.22□□□□□ -0.93
LINC01828-204ENST00000593336 SOWAHBA6NEL2 793 aa9.22□□□□□ -0.93
LINC01828-204ENST00000593336 C6orf132Q5T0Z8 1188 aa9.21□□□□□ -0.94
LINC01828-204ENST00000593336 WRNQ14191 1432 aaPredicted RBP eCLIP9.21□□□□□ -0.94
LINC01828-204ENST00000593336 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
LINC01828-204ENST00000593336 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
LINC01828-204ENST00000593336 IRX2Q9BZI1 471 aaPredicted RBP9.18□□□□□ -0.94
LINC01828-204ENST00000593336 CUX1P39880 1505 aa9.17□□□□□ -0.94
LINC01828-204ENST00000593336 CEP164Q9UPV0 1460 aa9.17□□□□□ -0.94
LINC01828-204ENST00000593336 TRIM6-TRIM34B2RNG4 842 aa9.17□□□□□ -0.94
LINC01828-204ENST00000593336 DPYSL4O14531 572 aa9.17□□□□□ -0.94
LINC01828-204ENST00000593336 FAM98CQ17RN3 349 aaKnown RBP9.17□□□□□ -0.94
LINC01828-204ENST00000593336 BCAMP50895 628 aa9.16□□□□□ -0.94
LINC01828-204ENST00000593336 SYNJ1O43426 1573 aa9.16□□□□□ -0.94
LINC01828-204ENST00000593336 URB2Q14146 1524 aaKnown RBP9.15□□□□□ -0.94
LINC01828-204ENST00000593336 BBXQ8WY36 941 aaPredicted RBP9.14□□□□□ -0.95
LINC01828-204ENST00000593336 PRDM2Q13029 1718 aa9.14□□□□□ -0.95
LINC01828-204ENST00000593336 PDIA6Q15084 440 aa9.13□□□□□ -0.95
LINC01828-204ENST00000593336 TOPBP1Q92547 1522 aa9.13□□□□□ -0.95
LINC01828-204ENST00000593336 SPDYE16A6NNV3 312 aaPredicted RBP9.12□□□□□ -0.95
LINC01828-204ENST00000593336 KCNC4Q03721 635 aa9.12□□□□□ -0.95
LINC01828-204ENST00000593336 WBP1LQ9NX94 342 aa9.12□□□□□ -0.95
LINC01828-204ENST00000593336 TSR3Q9UJK0 312 aaKnown RBP9.12□□□□□ -0.95
LINC01828-204ENST00000593336 ERCC6Q03468 1493 aa9.12□□□□□ -0.95
LINC01828-204ENST00000593336 MRC2Q9UBG0 1479 aa9.12□□□□□ -0.95
LINC01828-204ENST00000593336 KIF21AQ7Z4S6 1674 aa9.12□□□□□ -0.95
LINC01828-204ENST00000593336 TOP2BQ02880 1626 aa9.12□□□□□ -0.95
LINC01828-204ENST00000593336 EN1Q05925 392 aaPredicted RBP9.11□□□□□ -0.95
LINC01828-204ENST00000593336 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
LINC01828-204ENST00000593336 LRCH3Q96II8 777 aa9.11□□□□□ -0.95
LINC01828-204ENST00000593336 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.11□□□□□ -0.95
LINC01828-204ENST00000593336 SEPT9Q9UHD8 586 aaPredicted RBP9.11□□□□□ -0.95
LINC01828-204ENST00000593336 DDX12PQ92771 950 aa9.1□□□□□ -0.95
LINC01828-204ENST00000593336 ARIH1Q9Y4X5 557 aaPredicted RBP9.1□□□□□ -0.95
LINC01828-204ENST00000593336 DNMBPQ6XZF7 1577 aa9.1□□□□□ -0.95
LINC01828-204ENST00000593336 BIVM-ERCC5R4GMW8 1640 aa9.09□□□□□ -0.95
LINC01828-204ENST00000593336 CERKQ8TCT0 537 aa9.09□□□□□ -0.95
LINC01828-204ENST00000593336 RBM33Q96EV2 1170 aaKnown RBP9.09□□□□□ -0.95
LINC01828-204ENST00000593336 FGD5Q6ZNL6 1462 aa9.08□□□□□ -0.96
LINC01828-204ENST00000593336 POLA1P09884 1462 aaPredicted RBP9.08□□□□□ -0.96
LINC01828-204ENST00000593336 SOGA1O94964 1423 aa9.07□□□□□ -0.96
LINC01828-204ENST00000593336 WDR62O43379 1518 aa9.07□□□□□ -0.96
LINC01828-204ENST00000593336 MAP3K7O43318 606 aa9.07□□□□□ -0.96
LINC01828-204ENST00000593336 NBR1Q14596 966 aa9.07□□□□□ -0.96
LINC01828-204ENST00000593336 HPS5Q9UPZ3 1129 aa9.06□□□□□ -0.96
LINC01828-204ENST00000593336 CUX2O14529 1486 aa9.06□□□□□ -0.96
LINC01828-204ENST00000593336 RAD54L2Q9Y4B4 1467 aa9.06□□□□□ -0.96
LINC01828-204ENST00000593336 THOC2Q8NI27 1593 aaKnown RBP9.06□□□□□ -0.96
LINC01828-204ENST00000593336 RUSC2Q8N2Y8 1516 aa9.05□□□□□ -0.96
LINC01828-204ENST00000593336 TSKSQ9UJT2 592 aa9.05□□□□□ -0.96
LINC01828-204ENST00000593336 PRSS12P56730 875 aa9.03□□□□□ -0.96
LINC01828-204ENST00000593336 TSR1Q2NL82 804 aaKnown RBP9.03□□□□□ -0.96
LINC01828-204ENST00000593336 SPRYD3Q8NCJ5 442 aa9.03□□□□□ -0.96
LINC01828-204ENST00000593336 LAPTM4AQ15012 233 aa9.02□□□□□ -0.97
LINC01828-204ENST00000593336 E2F4Q16254 413 aa9.02□□□□□ -0.97
LINC01828-204ENST00000593336 FAM9AQ8IZU1 332 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms