RNA–Protein interactions for RNA: ENST00000593336.3

LINC01828-204, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-204ENST00000593336 AEBP2Q6ZN18 517 aaPredicted RBP23.05■■□□□ 1.28
LINC01828-204ENST00000593336 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
LINC01828-204ENST00000593336 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
LINC01828-204ENST00000593336 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
LINC01828-204ENST00000593336 FOXD1Q16676 465 aa18.37■□□□□ 0.53
LINC01828-204ENST00000593336 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
LINC01828-204ENST00000593336 MSH5O43196 834 aa17.33■□□□□ 0.36
LINC01828-204ENST00000593336 PIAS4Q8N2W9 510 aaPredicted RBP17.15■□□□□ 0.34
LINC01828-204ENST00000593336 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
LINC01828-204ENST00000593336 ADRA2BP18089 450 aa17■□□□□ 0.31
LINC01828-204ENST00000593336 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
LINC01828-204ENST00000593336 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
LINC01828-204ENST00000593336 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
LINC01828-204ENST00000593336 MAPK8IP2Q13387 824 aaPredicted RBP15.61■□□□□ 0.09
LINC01828-204ENST00000593336 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
LINC01828-204ENST00000593336 HOXD11P31277 338 aaPredicted RBP15.07■□□□□ 0
LINC01828-204ENST00000593336 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
LINC01828-204ENST00000593336 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
LINC01828-204ENST00000593336 DCAF8L1A6NGE4 600 aa14.9□□□□□ -0.02
LINC01828-204ENST00000593336 CACNB1Q02641 598 aaPredicted RBP14.83□□□□□ -0.04
LINC01828-204ENST00000593336 RNF39Q9H2S5 420 aa14.75□□□□□ -0.05
LINC01828-204ENST00000593336 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
LINC01828-204ENST00000593336 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
LINC01828-204ENST00000593336 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
LINC01828-204ENST00000593336 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
LINC01828-204ENST00000593336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.12
LINC01828-204ENST00000593336 KCNA4P22459 653 aa14.02□□□□□ -0.17
LINC01828-204ENST00000593336 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
LINC01828-204ENST00000593336 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
LINC01828-204ENST00000593336 CAPN15O75808 1086 aa13.76□□□□□ -0.21
LINC01828-204ENST00000593336 DSG3P32926 999 aa13.75□□□□□ -0.21
LINC01828-204ENST00000593336 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
LINC01828-204ENST00000593336 APLP2Q06481 763 aa13.72□□□□□ -0.21
LINC01828-204ENST00000593336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
LINC01828-204ENST00000593336 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
LINC01828-204ENST00000593336 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
LINC01828-204ENST00000593336 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
LINC01828-204ENST00000593336 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
LINC01828-204ENST00000593336 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
LINC01828-204ENST00000593336 ABCB7O75027 752 aa13.38□□□□□ -0.27
LINC01828-204ENST00000593336 POTEHQ6S545 545 aa13.3□□□□□ -0.28
LINC01828-204ENST00000593336 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
LINC01828-204ENST00000593336 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
LINC01828-204ENST00000593336 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
LINC01828-204ENST00000593336 POLA2Q14181 598 aa13.15□□□□□ -0.3
LINC01828-204ENST00000593336 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
LINC01828-204ENST00000593336 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
LINC01828-204ENST00000593336 ZBTB22O15209 634 aa12.88□□□□□ -0.35
LINC01828-204ENST00000593336 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
LINC01828-204ENST00000593336 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
LINC01828-204ENST00000593336 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
LINC01828-204ENST00000593336 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
LINC01828-204ENST00000593336 NISCHQ9Y2I1 1504 aa12.69□□□□□ -0.38
LINC01828-204ENST00000593336 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
LINC01828-204ENST00000593336 FBLN2P98095 1184 aa12.58□□□□□ -0.4
LINC01828-204ENST00000593336 SPDYE2BA6NHP3 402 aa12.56□□□□□ -0.4
LINC01828-204ENST00000593336 SPDYE6P0CI01 402 aa12.56□□□□□ -0.4
LINC01828-204ENST00000593336 SPDYE2Q495Y8 402 aa12.56□□□□□ -0.4
LINC01828-204ENST00000593336 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
LINC01828-204ENST00000593336 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
LINC01828-204ENST00000593336 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC01828-204ENST00000593336 SP7Q8TDD2 431 aaPredicted RBP12.44□□□□□ -0.42
LINC01828-204ENST00000593336 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
LINC01828-204ENST00000593336 SSUH2Q9Y2M2 353 aa12.37□□□□□ -0.43
LINC01828-204ENST00000593336 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
LINC01828-204ENST00000593336 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
LINC01828-204ENST00000593336 HAX1O00165 279 aa12.31□□□□□ -0.44
LINC01828-204ENST00000593336 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
LINC01828-204ENST00000593336 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
LINC01828-204ENST00000593336 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
LINC01828-204ENST00000593336 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
LINC01828-204ENST00000593336 EVX2Q03828 476 aa12.1□□□□□ -0.47
LINC01828-204ENST00000593336 C19orf67A6NJJ6 358 aa12.08□□□□□ -0.48
LINC01828-204ENST00000593336 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
LINC01828-204ENST00000593336 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
LINC01828-204ENST00000593336 EHMT2Q96KQ7 1210 aa11.93□□□□□ -0.5
LINC01828-204ENST00000593336 GABBR2O75899 941 aa11.88□□□□□ -0.51
LINC01828-204ENST00000593336 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
LINC01828-204ENST00000593336 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
LINC01828-204ENST00000593336 CLCN6P51797 869 aa11.85□□□□□ -0.51
LINC01828-204ENST00000593336 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
LINC01828-204ENST00000593336 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
LINC01828-204ENST00000593336 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
LINC01828-204ENST00000593336 ZNF579Q8NAF0 562 aaKnown RBP11.68□□□□□ -0.54
LINC01828-204ENST00000593336 LHX8Q68G74 356 aa11.64□□□□□ -0.55
LINC01828-204ENST00000593336 ZRANB1Q9UGI0 708 aa11.61□□□□□ -0.55
LINC01828-204ENST00000593336 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
LINC01828-204ENST00000593336 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
LINC01828-204ENST00000593336 PROM2Q8N271 834 aa11.58□□□□□ -0.56
LINC01828-204ENST00000593336 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
LINC01828-204ENST00000593336 DCBLD2Q96PD2 775 aa11.56□□□□□ -0.56
LINC01828-204ENST00000593336 MNX1P50219 401 aaPredicted RBP11.55□□□□□ -0.56
LINC01828-204ENST00000593336 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
LINC01828-204ENST00000593336 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
LINC01828-204ENST00000593336 PLEKHG5O94827 1062 aa11.33□□□□□ -0.6
LINC01828-204ENST00000593336 ASTLQ6HA08 431 aaPredicted RBP11.3□□□□□ -0.6
LINC01828-204ENST00000593336 MS4A3Q96HJ5 214 aa11.28□□□□□ -0.6
LINC01828-204ENST00000593336 CCDC61Q9Y6R9 512 aa11.28□□□□□ -0.6
LINC01828-204ENST00000593336 MIER1Q8N108 512 aa11.25□□□□□ -0.61
LINC01828-204ENST00000593336 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms