RNA–Protein interactions for RNA: ENST00000590523.1

LINC00662-206, long intergenic non-protein coding RNA 662, humanhuman

TSL 1 (best) BASIC

Gene LINC00662, Length 2,053 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-206ENST00000590523 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
LINC00662-206ENST00000590523 PREX2Q70Z35 1606 aa17.22■□□□□ 0.35
LINC00662-206ENST00000590523 E9PCH4 1651 aa17.22■□□□□ 0.35
LINC00662-206ENST00000590523 BRD4O60885 1362 aaPredicted RBP17.21■□□□□ 0.35
LINC00662-206ENST00000590523 RALBP1Q15311 655 aa17.21■□□□□ 0.35
LINC00662-206ENST00000590523 PRKCSHP14314 528 aaPredicted RBP17.2■□□□□ 0.34
LINC00662-206ENST00000590523 TMC1Q8TDI8 760 aa17.2■□□□□ 0.34
LINC00662-206ENST00000590523 PNISRQ8TF01 805 aaKnown RBP17.2■□□□□ 0.34
LINC00662-206ENST00000590523 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
LINC00662-206ENST00000590523 MAST1Q9Y2H9 1570 aa17.19■□□□□ 0.34
LINC00662-206ENST00000590523 CLASP1Q7Z460 1538 aa17.19■□□□□ 0.34
LINC00662-206ENST00000590523 FAM135AQ9P2D6 1515 aa17.19■□□□□ 0.34
LINC00662-206ENST00000590523 DEKP35659 375 aaKnown RBP17.19■□□□□ 0.34
LINC00662-206ENST00000590523 CDC42BPBQ9Y5S2 1711 aa17.18■□□□□ 0.34
LINC00662-206ENST00000590523 B4GALNT3Q6L9W6 998 aa17.18■□□□□ 0.34
LINC00662-206ENST00000590523 LRPPRCP42704 1394 aaKnown RBP17.18■□□□□ 0.34
LINC00662-206ENST00000590523 MYBBP1AQ9BQG0 1328 aaKnown RBP17.18■□□□□ 0.34
LINC00662-206ENST00000590523 SAMD9LQ8IVG5 1584 aa17.18■□□□□ 0.34
LINC00662-206ENST00000590523 LAMC1P11047 1609 aa17.17■□□□□ 0.34
LINC00662-206ENST00000590523 UNC13BO14795 1591 aa17.17■□□□□ 0.34
LINC00662-206ENST00000590523 SHROOM2Q13796 1616 aa17.16■□□□□ 0.34
LINC00662-206ENST00000590523 TRPM1Q7Z4N2 1603 aa17.16■□□□□ 0.34
LINC00662-206ENST00000590523 ST20-MTHFSA0A0A6YYL1 179 aa17.14■□□□□ 0.33
LINC00662-206ENST00000590523 HNRNPMP52272 730 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC00662-206ENST00000590523 DCAF11Q8TEB1 546 aa17.14■□□□□ 0.33
LINC00662-206ENST00000590523 CCDC144AA2RUR9 1427 aa17.14■□□□□ 0.33
LINC00662-206ENST00000590523 PRAG1Q86YV5 1406 aa17.13■□□□□ 0.33
LINC00662-206ENST00000590523 PLEKHH2Q8IVE3 1493 aa17.13■□□□□ 0.33
LINC00662-206ENST00000590523 PLXNC1O60486 1568 aa17.12■□□□□ 0.33
LINC00662-206ENST00000590523 ERCC6L2Q5T890 1561 aa17.12■□□□□ 0.33
LINC00662-206ENST00000590523 GPRASP1Q5JY77 1395 aa17.12■□□□□ 0.33
LINC00662-206ENST00000590523 EIF2AK4Q9P2K8 1649 aaKnown RBP17.12■□□□□ 0.33
LINC00662-206ENST00000590523 KDM2AQ9Y2K7 1162 aa17.11■□□□□ 0.33
LINC00662-206ENST00000590523 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
LINC00662-206ENST00000590523 IQGAP3Q86VI3 1631 aa17.1■□□□□ 0.33
LINC00662-206ENST00000590523 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
LINC00662-206ENST00000590523 INSRP06213 1382 aa17.1■□□□□ 0.33
LINC00662-206ENST00000590523 CCDC136Q96JN2 1154 aa17.09■□□□□ 0.33
LINC00662-206ENST00000590523 ZMYM4Q5VZL5 1548 aa17.09■□□□□ 0.33
LINC00662-206ENST00000590523 NLRP13Q86W25 1043 aa17.09■□□□□ 0.33
LINC00662-206ENST00000590523 PDE3BQ13370 1112 aa17.08■□□□□ 0.33
LINC00662-206ENST00000590523 PARD3Q8TEW0 1356 aa17.08■□□□□ 0.33
LINC00662-206ENST00000590523 SYCP2Q9BX26 1530 aa17.07■□□□□ 0.32
LINC00662-206ENST00000590523 PRDM15P57071 1507 aaPredicted RBP17.07■□□□□ 0.32
LINC00662-206ENST00000590523 ARHGAP5Q13017 1502 aa17.07■□□□□ 0.32
LINC00662-206ENST00000590523 ATP10AO60312 1499 aa17.07■□□□□ 0.32
LINC00662-206ENST00000590523 MYO5CQ9NQX4 1742 aa17.06■□□□□ 0.32
LINC00662-206ENST00000590523 DUOX2Q9NRD8 1548 aa17.05■□□□□ 0.32
LINC00662-206ENST00000590523 COL17A1Q9UMD9 1497 aaPredicted RBP17.05■□□□□ 0.32
LINC00662-206ENST00000590523 CNGB1Q14028 1251 aaPredicted RBP17.05■□□□□ 0.32
LINC00662-206ENST00000590523 TTC37Q6PGP7 1564 aa17.04■□□□□ 0.32
LINC00662-206ENST00000590523 A2MP01023 1474 aa17.04■□□□□ 0.32
LINC00662-206ENST00000590523 MAGI2Q86UL8 1455 aa17.03■□□□□ 0.32
LINC00662-206ENST00000590523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.03■□□□□ 0.32
LINC00662-206ENST00000590523 PLA2R1Q13018 1463 aa17.03■□□□□ 0.32
LINC00662-206ENST00000590523 ERBINQ96RT1 1412 aa17.03■□□□□ 0.32
LINC00662-206ENST00000590523 ABCC2Q92887 1545 aa17■□□□□ 0.31
LINC00662-206ENST00000590523 PER1O15534 1290 aaPredicted RBP16.99■□□□□ 0.31
LINC00662-206ENST00000590523 RRP1P56182 461 aaKnown RBP16.99■□□□□ 0.31
LINC00662-206ENST00000590523 RNF17Q9BXT8 1623 aaKnown RBP16.98■□□□□ 0.31
LINC00662-206ENST00000590523 RCAN3Q9UKA8 241 aa16.97■□□□□ 0.31
LINC00662-206ENST00000590523 ANP32AP39687 249 aaKnown RBP16.97■□□□□ 0.31
LINC00662-206ENST00000590523 TMF1P82094 1093 aa16.96■□□□□ 0.31
LINC00662-206ENST00000590523 TESK2Q96S53 571 aa16.96■□□□□ 0.31
LINC00662-206ENST00000590523 BLMP54132 1417 aaPredicted RBP16.96■□□□□ 0.3
LINC00662-206ENST00000590523 STAC3Q96MF2 364 aa16.95■□□□□ 0.3
LINC00662-206ENST00000590523 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
LINC00662-206ENST00000590523 RGL3Q3MIN7 710 aa16.95■□□□□ 0.3
LINC00662-206ENST00000590523 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
LINC00662-206ENST00000590523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
LINC00662-206ENST00000590523 IPO9Q96P70 1041 aaKnown RBP16.93■□□□□ 0.3
LINC00662-206ENST00000590523 PLCH2O75038 1416 aa16.93■□□□□ 0.3
LINC00662-206ENST00000590523 DISP3Q9P2K9 1392 aa16.92■□□□□ 0.3
LINC00662-206ENST00000590523 TCERG1O14776 1098 aaKnown RBP16.92■□□□□ 0.3
LINC00662-206ENST00000590523 EFCAB2Q5VUJ9 269 aa16.9■□□□□ 0.3
LINC00662-206ENST00000590523 ABCC1P33527 1531 aa16.9■□□□□ 0.3
LINC00662-206ENST00000590523 UHRF1BP1LA0JNW5 1464 aa16.9■□□□□ 0.3
LINC00662-206ENST00000590523 PANK3Q9H999 370 aa16.89■□□□□ 0.29
LINC00662-206ENST00000590523 ARAP3Q8WWN8 1544 aa16.89■□□□□ 0.29
LINC00662-206ENST00000590523 IQGAP1P46940 1657 aa16.88■□□□□ 0.29
LINC00662-206ENST00000590523 PAK3O75914 559 aaPredicted RBP16.88■□□□□ 0.29
LINC00662-206ENST00000590523 MS4A1P11836 297 aa16.88■□□□□ 0.29
LINC00662-206ENST00000590523 CDCA8Q53HL2 280 aa16.88■□□□□ 0.29
LINC00662-206ENST00000590523 MADDQ8WXG6 1647 aa16.88■□□□□ 0.29
LINC00662-206ENST00000590523 RTEL1-TNFRSF6BF6WH68 1400 aa16.88■□□□□ 0.29
LINC00662-206ENST00000590523 TRPM2O94759 1503 aa16.87■□□□□ 0.29
LINC00662-206ENST00000590523 CEP152O94986 1710 aa16.87■□□□□ 0.29
LINC00662-206ENST00000590523 NBR1Q14596 966 aa16.87■□□□□ 0.29
LINC00662-206ENST00000590523 ZCCHC11Q5TAX3 1644 aaKnown RBP16.86■□□□□ 0.29
LINC00662-206ENST00000590523 SPHKAPQ2M3C7 1700 aa16.86■□□□□ 0.29
LINC00662-206ENST00000590523 EXOC6Q8TAG9 804 aa16.86■□□□□ 0.29
LINC00662-206ENST00000590523 SCAPERQ9BY12 1400 aa16.86■□□□□ 0.29
LINC00662-206ENST00000590523 USP35Q9P2H5 1018 aa16.85■□□□□ 0.29
LINC00662-206ENST00000590523 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
LINC00662-206ENST00000590523 ZBTB47Q9UFB7 747 aaPredicted RBP16.85■□□□□ 0.29
LINC00662-206ENST00000590523 SYNMO15061 1565 aa16.85■□□□□ 0.29
LINC00662-206ENST00000590523 NEURL4Q96JN8 1562 aa16.84■□□□□ 0.29
LINC00662-206ENST00000590523 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC00662-206ENST00000590523 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
LINC00662-206ENST00000590523 WDR7Q9Y4E6 1490 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms