RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 DCAF11Q8TEB1 546 aa19.23■□□□□ 0.67
CDK5RAP3-237ENST00000585163 KTN1Q86UP2 1357 aaKnown RBP19.23■□□□□ 0.67
CDK5RAP3-237ENST00000585163 SAMD9LQ8IVG5 1584 aa19.22■□□□□ 0.67
CDK5RAP3-237ENST00000585163 KDM2AQ9Y2K7 1162 aa19.22■□□□□ 0.67
CDK5RAP3-237ENST00000585163 TMC1Q8TDI8 760 aa19.22■□□□□ 0.67
CDK5RAP3-237ENST00000585163 FAM135AQ9P2D6 1515 aa19.22■□□□□ 0.67
CDK5RAP3-237ENST00000585163 CDC42BPBQ9Y5S2 1711 aa19.21■□□□□ 0.67
CDK5RAP3-237ENST00000585163 PREX2Q70Z35 1606 aa19.21■□□□□ 0.67
CDK5RAP3-237ENST00000585163 RSPH4AQ5TD94 716 aa19.2■□□□□ 0.66
CDK5RAP3-237ENST00000585163 E9PCH4 1651 aa19.2■□□□□ 0.66
CDK5RAP3-237ENST00000585163 LRPPRCP42704 1394 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-237ENST00000585163 BRD4O60885 1362 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP3-237ENST00000585163 RALBP1Q15311 655 aa19.18■□□□□ 0.66
CDK5RAP3-237ENST00000585163 MYBBP1AQ9BQG0 1328 aaKnown RBP19.17■□□□□ 0.66
CDK5RAP3-237ENST00000585163 TRPM1Q7Z4N2 1603 aa19.16■□□□□ 0.66
CDK5RAP3-237ENST00000585163 PRAG1Q86YV5 1406 aa19.16■□□□□ 0.66
CDK5RAP3-237ENST00000585163 CCDC144AA2RUR9 1427 aa19.15■□□□□ 0.66
CDK5RAP3-237ENST00000585163 MAST1Q9Y2H9 1570 aa19.14■□□□□ 0.65
CDK5RAP3-237ENST00000585163 UNC13BO14795 1591 aa19.13■□□□□ 0.65
CDK5RAP3-237ENST00000585163 SYCP2Q9BX26 1530 aa19.12■□□□□ 0.65
CDK5RAP3-237ENST00000585163 PLA2R1Q13018 1463 aa19.1■□□□□ 0.65
CDK5RAP3-237ENST00000585163 GPRASP1Q5JY77 1395 aa19.1■□□□□ 0.65
CDK5RAP3-237ENST00000585163 CCDC136Q96JN2 1154 aa19.09■□□□□ 0.65
CDK5RAP3-237ENST00000585163 PARD3Q8TEW0 1356 aa19.09■□□□□ 0.65
CDK5RAP3-237ENST00000585163 TTC37Q6PGP7 1564 aa19.09■□□□□ 0.65
CDK5RAP3-237ENST00000585163 ARHGAP5Q13017 1502 aa19.08■□□□□ 0.64
CDK5RAP3-237ENST00000585163 SENP3-EIF4A1A0A087X0R7 540 aa19.08■□□□□ 0.64
CDK5RAP3-237ENST00000585163 LAMC1P11047 1609 aa19.08■□□□□ 0.64
CDK5RAP3-237ENST00000585163 A2MP01023 1474 aa19.07■□□□□ 0.64
CDK5RAP3-237ENST00000585163 NLRP13Q86W25 1043 aa19.07■□□□□ 0.64
CDK5RAP3-237ENST00000585163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.07■□□□□ 0.643e-9■■□□□ 12.3
CDK5RAP3-237ENST00000585163 PLXNC1O60486 1568 aa19.07■□□□□ 0.64
CDK5RAP3-237ENST00000585163 IQGAP3Q86VI3 1631 aa19.06■□□□□ 0.64
CDK5RAP3-237ENST00000585163 NBPF1Q3BBV0 1214 aa19.06■□□□□ 0.64
CDK5RAP3-237ENST00000585163 PER1O15534 1290 aaPredicted RBP19.06■□□□□ 0.64
CDK5RAP3-237ENST00000585163 RGL3Q3MIN7 710 aa19.05■□□□□ 0.64
CDK5RAP3-237ENST00000585163 PRDM15P57071 1507 aaPredicted RBP19.05■□□□□ 0.64
CDK5RAP3-237ENST00000585163 COL17A1Q9UMD9 1497 aaPredicted RBP19.04■□□□□ 0.64
CDK5RAP3-237ENST00000585163 PLEKHH2Q8IVE3 1493 aa19.04■□□□□ 0.64
CDK5RAP3-237ENST00000585163 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
CDK5RAP3-237ENST00000585163 WASHC2CQ9Y4E1 1318 aa19.03■□□□□ 0.64
CDK5RAP3-237ENST00000585163 ATP10AO60312 1499 aa19.03■□□□□ 0.64
CDK5RAP3-237ENST00000585163 MYO5CQ9NQX4 1742 aa19.02■□□□□ 0.64
CDK5RAP3-237ENST00000585163 EIF2AK4Q9P2K8 1649 aaKnown RBP19.02■□□□□ 0.63
CDK5RAP3-237ENST00000585163 TESK2Q96S53 571 aa19.02■□□□□ 0.63
CDK5RAP3-237ENST00000585163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.02■□□□□ 0.632e-7■■□□□ 13.2
CDK5RAP3-237ENST00000585163 CHD1O14646 1710 aa19.01■□□□□ 0.63
CDK5RAP3-237ENST00000585163 MAGI2Q86UL8 1455 aa19.01■□□□□ 0.63
CDK5RAP3-237ENST00000585163 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
CDK5RAP3-237ENST00000585163 PDE3BQ13370 1112 aa19■□□□□ 0.63
CDK5RAP3-237ENST00000585163 DISP3Q9P2K9 1392 aa18.99■□□□□ 0.63
CDK5RAP3-237ENST00000585163 RRP1P56182 461 aaKnown RBP18.99■□□□□ 0.63
CDK5RAP3-237ENST00000585163 ABCC2Q92887 1545 aa18.99■□□□□ 0.63
CDK5RAP3-237ENST00000585163 ERBINQ96RT1 1412 aa18.98■□□□□ 0.63
CDK5RAP3-237ENST00000585163 INSRP06213 1382 aa18.97■□□□□ 0.63
CDK5RAP3-237ENST00000585163 RCAN3Q9UKA8 241 aa18.97■□□□□ 0.63
CDK5RAP3-237ENST00000585163 ZMYM4Q5VZL5 1548 aa18.96■□□□□ 0.63
CDK5RAP3-237ENST00000585163 NOP58Q9Y2X3 529 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-237ENST00000585163 RNF17Q9BXT8 1623 aaKnown RBP18.93■□□□□ 0.62
CDK5RAP3-237ENST00000585163 TMF1P82094 1093 aa18.93■□□□□ 0.62
CDK5RAP3-237ENST00000585163 PANK3Q9H999 370 aa18.93■□□□□ 0.62
CDK5RAP3-237ENST00000585163 PLCH2O75038 1416 aa18.93■□□□□ 0.62
CDK5RAP3-237ENST00000585163 BLMP54132 1417 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP3-237ENST00000585163 ERCC6L2Q5T890 1561 aa18.92■□□□□ 0.62
CDK5RAP3-237ENST00000585163 CC2D1BQ5T0F9 858 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP3-237ENST00000585163 SALL2Q9Y467 1007 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP3-237ENST00000585163 EXOC6Q8TAG9 804 aa18.91■□□□□ 0.62
CDK5RAP3-237ENST00000585163 MYT1LQ9UL68 1186 aa18.91■□□□□ 0.62
CDK5RAP3-237ENST00000585163 DAXXQ9UER7 740 aaPredicted RBP18.89■□□□□ 0.61
CDK5RAP3-237ENST00000585163 ANP32AP39687 249 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-237ENST00000585163 CDCA7LQ96GN5 454 aa18.88■□□□□ 0.61
CDK5RAP3-237ENST00000585163 ABCC1P33527 1531 aa18.88■□□□□ 0.61
CDK5RAP3-237ENST00000585163 EFCAB2Q5VUJ9 269 aa18.88■□□□□ 0.61
CDK5RAP3-237ENST00000585163 IPO9Q96P70 1041 aaKnown RBP18.87■□□□□ 0.61
CDK5RAP3-237ENST00000585163 PAK3O75914 559 aaPredicted RBP18.86■□□□□ 0.61
CDK5RAP3-237ENST00000585163 ZCCHC11Q5TAX3 1644 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP3-237ENST00000585163 MADDQ8WXG6 1647 aa18.85■□□□□ 0.61
CDK5RAP3-237ENST00000585163 TRAPPC8Q9Y2L5 1435 aa18.85■□□□□ 0.61
CDK5RAP3-237ENST00000585163 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
CDK5RAP3-237ENST00000585163 IQGAP1P46940 1657 aa18.84■□□□□ 0.61
CDK5RAP3-237ENST00000585163 TCERG1O14776 1098 aaKnown RBP18.83■□□□□ 0.6
CDK5RAP3-237ENST00000585163 UHRF1BP1LA0JNW5 1464 aa18.83■□□□□ 0.6
CDK5RAP3-237ENST00000585163 TRPM2O94759 1503 aa18.82■□□□□ 0.6
CDK5RAP3-237ENST00000585163 STAC3Q96MF2 364 aa18.8■□□□□ 0.6
CDK5RAP3-237ENST00000585163 RTEL1-TNFRSF6BF6WH68 1400 aa18.8■□□□□ 0.6
CDK5RAP3-237ENST00000585163 SPHKAPQ2M3C7 1700 aa18.8■□□□□ 0.6
CDK5RAP3-237ENST00000585163 CEP152O94986 1710 aa18.8■□□□□ 0.6
CDK5RAP3-237ENST00000585163 PTPRTO14522 1441 aa18.79■□□□□ 0.6
CDK5RAP3-237ENST00000585163 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
CDK5RAP3-237ENST00000585163 SPAG9O60271 1321 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-237ENST00000585163 ADAMTS8Q9UP79 889 aa18.78■□□□□ 0.6
CDK5RAP3-237ENST00000585163 KNSTRNQ9Y448 316 aa18.78■□□□□ 0.6
CDK5RAP3-237ENST00000585163 ZFYVE16Q7Z3T8 1539 aa18.78■□□□□ 0.6
CDK5RAP3-237ENST00000585163 ARAP3Q8WWN8 1544 aa18.78■□□□□ 0.6
CDK5RAP3-237ENST00000585163 SCAF11Q99590 1463 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-237ENST00000585163 SYNMO15061 1565 aa18.77■□□□□ 0.6
CDK5RAP3-237ENST00000585163 ZBTB47Q9UFB7 747 aaPredicted RBP18.77■□□□□ 0.6
CDK5RAP3-237ENST00000585163 MS4A1P11836 297 aa18.77■□□□□ 0.6
CDK5RAP3-237ENST00000585163 CDCA8Q53HL2 280 aa18.77■□□□□ 0.6
CDK5RAP3-237ENST00000585163 DEPDC5O75140 1603 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms