RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 TRIM52Q96A61 297 aa7.96□□□□□ -1.14
CRLF3-204ENST00000583527 BCORL1Q5H9F3 1711 aa7.95□□□□□ -1.14
CRLF3-204ENST00000583527 NEUROD1Q13562 356 aa7.95□□□□□ -1.14
CRLF3-204ENST00000583527 MPHOSPH9Q99550 1183 aa7.95□□□□□ -1.14
CRLF3-204ENST00000583527 TIMELESSQ9UNS1 1208 aa7.95□□□□□ -1.14
CRLF3-204ENST00000583527 DIP2BQ9P265 1576 aa7.95□□□□□ -1.14
CRLF3-204ENST00000583527 E9PCH4 1651 aa7.95□□□□□ -1.14
CRLF3-204ENST00000583527 CEP152O94986 1710 aa7.95□□□□□ -1.14
CRLF3-204ENST00000583527 RICTORQ6R327 1708 aa7.95□□□□□ -1.14
CRLF3-204ENST00000583527 POGZQ7Z3K3 1410 aa7.95□□□□□ -1.14
CRLF3-204ENST00000583527 VWDEQ8N2E2 1590 aa7.94□□□□□ -1.14
CRLF3-204ENST00000583527 GLI2P10070 1586 aa7.93□□□□□ -1.14
CRLF3-204ENST00000583527 FRMPD1Q5SYB0 1578 aa7.93□□□□□ -1.14
CRLF3-204ENST00000583527 HNRNPMP52272 730 aaKnown RBP eCLIP7.93□□□□□ -1.14
CRLF3-204ENST00000583527 OSCARQ8IYS5 282 aa7.93□□□□□ -1.14
CRLF3-204ENST00000583527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.93□□□□□ -1.14
CRLF3-204ENST00000583527 RTEL1-TNFRSF6BF6WH68 1400 aa7.93□□□□□ -1.14
CRLF3-204ENST00000583527 ZNF518AQ6AHZ1 1483 aa7.93□□□□□ -1.14
CRLF3-204ENST00000583527 TRPM2O94759 1503 aa7.93□□□□□ -1.14
CRLF3-204ENST00000583527 PPRC1Q5VV67 1664 aaKnown RBP7.92□□□□□ -1.14
CRLF3-204ENST00000583527 SLC4A1APQ9BWU0 796 aaKnown RBP7.92□□□□□ -1.14
CRLF3-204ENST00000583527 NUP155O75694 1391 aa7.92□□□□□ -1.14
CRLF3-204ENST00000583527 RALGAPBQ86X10 1494 aa7.92□□□□□ -1.14
CRLF3-204ENST00000583527 EFCAB6Q5THR3 1501 aa7.92□□□□□ -1.14
CRLF3-204ENST00000583527 TSPY4P0CV99 314 aa7.91□□□□□ -1.14
CRLF3-204ENST00000583527 TSPY10P0CW01 314 aa7.91□□□□□ -1.14
CRLF3-204ENST00000583527 EFCAB2Q5VUJ9 269 aa7.91□□□□□ -1.14
CRLF3-204ENST00000583527 KCNH8Q96L42 1107 aa7.91□□□□□ -1.14
CRLF3-204ENST00000583527 DIP2CQ9Y2E4 1556 aa7.91□□□□□ -1.14
CRLF3-204ENST00000583527 CLTCL1P53675 1640 aa7.91□□□□□ -1.14
CRLF3-204ENST00000583527 TRPM1Q7Z4N2 1603 aa7.91□□□□□ -1.14
CRLF3-204ENST00000583527 LAMC1P11047 1609 aa7.9□□□□□ -1.14
CRLF3-204ENST00000583527 ZMYM4Q5VZL5 1548 aa7.9□□□□□ -1.14
CRLF3-204ENST00000583527 NEO1Q92859 1461 aa7.9□□□□□ -1.14
CRLF3-204ENST00000583527 RSPH4AQ5TD94 716 aa7.9□□□□□ -1.14
CRLF3-204ENST00000583527 ZC3H13Q5T200 1668 aaKnown RBP7.89□□□□□ -1.15
CRLF3-204ENST00000583527 SCAPERQ9BY12 1400 aa7.89□□□□□ -1.15
CRLF3-204ENST00000583527 KIF13AQ9H1H9 1805 aa7.89□□□□□ -1.15
CRLF3-204ENST00000583527 MROH2AA6NES4 1674 aa7.89□□□□□ -1.15
CRLF3-204ENST00000583527 MADDQ8WXG6 1647 aa7.89□□□□□ -1.15
CRLF3-204ENST00000583527 ATP10AO60312 1499 aa7.88□□□□□ -1.15
CRLF3-204ENST00000583527 CD109Q6YHK3 1445 aa7.88□□□□□ -1.15
CRLF3-204ENST00000583527 SPAG9O60271 1321 aaKnown RBP7.88□□□□□ -1.15
CRLF3-204ENST00000583527 PPP1R15AO75807 674 aaPredicted RBP7.88□□□□□ -1.15
CRLF3-204ENST00000583527 DSG3P32926 999 aa7.88□□□□□ -1.15
CRLF3-204ENST00000583527 IFT172Q9UG01 1749 aa7.88□□□□□ -1.15
CRLF3-204ENST00000583527 CAMSAP1Q5T5Y3 1602 aa7.88□□□□□ -1.15
CRLF3-204ENST00000583527 PLA2R1Q13018 1463 aa7.87□□□□□ -1.15
CRLF3-204ENST00000583527 TSPOAP1O95153 1857 aa7.87□□□□□ -1.15
CRLF3-204ENST00000583527 UHRF1BP1Q6BDS2 1440 aa7.87□□□□□ -1.15
CRLF3-204ENST00000583527 PKD2Q13563 968 aa7.87□□□□□ -1.15
CRLF3-204ENST00000583527 LMTK2Q8IWU2 1503 aa7.87□□□□□ -1.15
CRLF3-204ENST00000583527 A2MP01023 1474 aa7.87□□□□□ -1.15
CRLF3-204ENST00000583527 MLH3Q9UHC1 1453 aa7.87□□□□□ -1.15
CRLF3-204ENST00000583527 CCDC144AA2RUR9 1427 aa7.86□□□□□ -1.15
CRLF3-204ENST00000583527 ARHGEF40Q8TER5 1519 aa7.86□□□□□ -1.15
CRLF3-204ENST00000583527 NEURL4Q96JN8 1562 aa7.85□□□□□ -1.15
CRLF3-204ENST00000583527 IQGAP1P46940 1657 aa7.85□□□□□ -1.15
CRLF3-204ENST00000583527 KIF1BO60333 1816 aa7.85□□□□□ -1.15
CRLF3-204ENST00000583527 ABCC3O15438 1527 aa7.84□□□□□ -1.15
CRLF3-204ENST00000583527 L3MBTL2Q969R5 705 aa7.84□□□□□ -1.15
CRLF3-204ENST00000583527 SPINK5Q9NQ38 1064 aaPredicted RBP7.84□□□□□ -1.15
CRLF3-204ENST00000583527 PRAG1Q86YV5 1406 aa7.83□□□□□ -1.16
CRLF3-204ENST00000583527 UGGT1Q9NYU2 1555 aa7.83□□□□□ -1.16
CRLF3-204ENST00000583527 REREQ9P2R6 1566 aa7.83□□□□□ -1.16
CRLF3-204ENST00000583527 SIGLEC1Q9BZZ2 1709 aa7.83□□□□□ -1.16
CRLF3-204ENST00000583527 KIAA1210Q9ULL0 1709 aa7.83□□□□□ -1.16
CRLF3-204ENST00000583527 ADGRB3O60242 1522 aa7.83□□□□□ -1.16
CRLF3-204ENST00000583527 NPM1P06748 294 aaKnown RBP eCLIP7.82□□□□□ -1.16
CRLF3-204ENST00000583527 SPATA31E1Q6ZUB1 1445 aa7.82□□□□□ -1.16
CRLF3-204ENST00000583527 MIER1Q8N108 512 aa7.82□□□□□ -1.16
CRLF3-204ENST00000583527 CNTLNQ9NXG0 1405 aa7.82□□□□□ -1.16
CRLF3-204ENST00000583527 USP47Q96K76 1375 aa7.82□□□□□ -1.16
CRLF3-204ENST00000583527 PIK3C2BO00750 1634 aa7.81□□□□□ -1.16
CRLF3-204ENST00000583527 PTPRTO14522 1441 aa7.81□□□□□ -1.16
CRLF3-204ENST00000583527 AFAP1Q8N556 730 aa7.81□□□□□ -1.16
CRLF3-204ENST00000583527 KANK1Q14678 1352 aa7.81□□□□□ -1.16
CRLF3-204ENST00000583527 DHX29Q7Z478 1369 aaKnown RBP7.81□□□□□ -1.16
CRLF3-204ENST00000583527 PPLO60437 1756 aa7.8□□□□□ -1.16
CRLF3-204ENST00000583527 NBPF8Q3BBV2 869 aa7.8□□□□□ -1.16
CRLF3-204ENST00000583527 MYOM2P54296 1465 aa7.8□□□□□ -1.16
CRLF3-204ENST00000583527 SYNMO15061 1565 aa7.8□□□□□ -1.16
CRLF3-204ENST00000583527 HSPA5P11021 654 aaKnown RBP7.79□□□□□ -1.16
CRLF3-204ENST00000583527 CCDC7Q96M83 1385 aa7.79□□□□□ -1.16
CRLF3-204ENST00000583527 PREX1Q8TCU6 1659 aa7.79□□□□□ -1.16
CRLF3-204ENST00000583527 YEATS2Q9ULM3 1422 aa7.78□□□□□ -1.16
CRLF3-204ENST00000583527 CAPN15O75808 1086 aa7.78□□□□□ -1.16
CRLF3-204ENST00000583527 HIRIP3Q9BW71 556 aaPredicted RBP7.78□□□□□ -1.16
CRLF3-204ENST00000583527 GPRASP1Q5JY77 1395 aa7.78□□□□□ -1.16
CRLF3-204ENST00000583527 COL17A1Q9UMD9 1497 aaPredicted RBP7.78□□□□□ -1.16
CRLF3-204ENST00000583527 EIF4G2P78344 907 aaKnown RBP eCLIP7.77□□□□□ -1.17
CRLF3-204ENST00000583527 MYO5BQ9ULV0 1848 aa7.77□□□□□ -1.17
CRLF3-204ENST00000583527 NPATQ14207 1427 aa7.77□□□□□ -1.17
CRLF3-204ENST00000583527 WASHC2AQ641Q2 1341 aa7.77□□□□□ -1.17
CRLF3-204ENST00000583527 CFAP65Q6ZU64 1925 aaKnown RBP7.76□□□□□ -1.17
CRLF3-204ENST00000583527 CENPBP07199 599 aaPredicted RBP7.76□□□□□ -1.17
CRLF3-204ENST00000583527 ZNF326Q5BKZ1 582 aaKnown RBP7.76□□□□□ -1.17
CRLF3-204ENST00000583527 MYO3AQ8NEV4 1616 aa7.76□□□□□ -1.17
CRLF3-204ENST00000583527 MYOM1P52179 1685 aa7.76□□□□□ -1.17
CRLF3-204ENST00000583527 ROCK2O75116 1388 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms