RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 DDX10Q13206 875 aaKnown RBP7.61□□□□□ -1.19
VAPA-203ENST00000577539 IL27Q8NEV9 243 aa7.61□□□□□ -1.19
VAPA-203ENST00000577539 LRRC9Q6ZRR7 1453 aa7.61□□□□□ -1.19
VAPA-203ENST00000577539 PDE4AP27815 886 aa7.6□□□□□ -1.19
VAPA-203ENST00000577539 MTUS2Q5JR59 1369 aa7.6□□□□□ -1.19
VAPA-203ENST00000577539 DSG2Q14126 1118 aa7.6□□□□□ -1.19
VAPA-203ENST00000577539 PIP4P2Q8N4L2 257 aa7.6□□□□□ -1.19
VAPA-203ENST00000577539 FECHP22830 423 aa7.6□□□□□ -1.19
VAPA-203ENST00000577539 ZMYND15Q9H091 742 aa7.6□□□□□ -1.19
VAPA-203ENST00000577539 TIAM1Q13009 1591 aa7.59□□□□□ -1.19
VAPA-203ENST00000577539 PHF12Q96QT6 1004 aa7.59□□□□□ -1.19
VAPA-203ENST00000577539 PDCD7Q8N8D1 485 aaKnown RBP7.59□□□□□ -1.19
VAPA-203ENST00000577539 TMEM121BQ9BXQ6 578 aaPredicted RBP7.59□□□□□ -1.19
VAPA-203ENST00000577539 POLA1P09884 1462 aaPredicted RBP7.58□□□□□ -1.2
VAPA-203ENST00000577539 AMHR2Q16671 573 aa7.58□□□□□ -1.2
VAPA-203ENST00000577539 TOPBP1Q92547 1522 aa7.58□□□□□ -1.2
VAPA-203ENST00000577539 GPIHBP1Q8IV16 184 aa7.58□□□□□ -1.2
VAPA-203ENST00000577539 OSBPP22059 807 aa7.57□□□□□ -1.2
VAPA-203ENST00000577539 DPY19L2Q6NUT2 758 aa7.57□□□□□ -1.2
VAPA-203ENST00000577539 OXER1Q8TDS5 423 aa7.57□□□□□ -1.2
VAPA-203ENST00000577539 REPIN1Q9BWE0 567 aaKnown RBP7.57□□□□□ -1.2
VAPA-203ENST00000577539 DPYSL4O14531 572 aa7.57□□□□□ -1.2
VAPA-203ENST00000577539 PPP1R15BQ5SWA1 713 aa7.57□□□□□ -1.2
VAPA-203ENST00000577539 KCNH8Q96L42 1107 aa7.57□□□□□ -1.2
VAPA-203ENST00000577539 CHIC2Q9UKJ5 165 aa7.57□□□□□ -1.2
VAPA-203ENST00000577539 PARP9Q8IXQ6 854 aa7.56□□□□□ -1.2
VAPA-203ENST00000577539 TMUB1Q9BVT8 246 aa7.56□□□□□ -1.2
VAPA-203ENST00000577539 TRIM52Q96A61 297 aa7.55□□□□□ -1.2
VAPA-203ENST00000577539 PCF11O94913 1555 aaKnown RBP7.55□□□□□ -1.2
VAPA-203ENST00000577539 DNMBPQ6XZF7 1577 aa7.55□□□□□ -1.2
VAPA-203ENST00000577539 FBXO31Q5XUX0 539 aaPredicted RBP7.55□□□□□ -1.2
VAPA-203ENST00000577539 ABCA10Q8WWZ4 1543 aa7.55□□□□□ -1.2
VAPA-203ENST00000577539 TONSLQ96HA7 1378 aa7.54□□□□□ -1.2
VAPA-203ENST00000577539 FOXK1P85037 733 aa7.54□□□□□ -1.2
VAPA-203ENST00000577539 RRP7BPQ9NSQ0 103 aa7.54□□□□□ -1.2
VAPA-203ENST00000577539 FMN1Q68DA7 1419 aa7.54□□□□□ -1.2
VAPA-203ENST00000577539 MAP3K1Q13233 1512 aa7.53□□□□□ -1.2
VAPA-203ENST00000577539 CASKIN1Q8WXD9 1431 aa7.53□□□□□ -1.2
VAPA-203ENST00000577539 TMEM92Q6UXU6 159 aa7.53□□□□□ -1.2
VAPA-203ENST00000577539 PRDM2Q13029 1718 aa7.53□□□□□ -1.2
VAPA-203ENST00000577539 PPP1R15AO75807 674 aaPredicted RBP7.52□□□□□ -1.21
VAPA-203ENST00000577539 MS4A3Q96HJ5 214 aa7.52□□□□□ -1.21
VAPA-203ENST00000577539 MAPKBP1O60336 1514 aa7.52□□□□□ -1.21
VAPA-203ENST00000577539 PDS5BQ9NTI5 1447 aa7.52□□□□□ -1.21
VAPA-203ENST00000577539 TTLL13PA6NNM8 815 aa7.52□□□□□ -1.21
VAPA-203ENST00000577539 GAPVD1Q14C86 1478 aa7.52□□□□□ -1.21
VAPA-203ENST00000577539 ANP32CO43423 234 aa7.51□□□□□ -1.21
VAPA-203ENST00000577539 PHOX2BQ99453 314 aa7.51□□□□□ -1.21
VAPA-203ENST00000577539 FYCO1Q9BQS8 1478 aa7.51□□□□□ -1.21
VAPA-203ENST00000577539 CCDC102AQ96A19 550 aa7.51□□□□□ -1.21
VAPA-203ENST00000577539 FGD6Q6ZV73 1430 aa7.51□□□□□ -1.21
VAPA-203ENST00000577539 URB2Q14146 1524 aaKnown RBP7.51□□□□□ -1.21
VAPA-203ENST00000577539 MS4A1P11836 297 aa7.51□□□□□ -1.21
VAPA-203ENST00000577539 SUPT16HQ9Y5B9 1047 aaKnown RBP7.51□□□□□ -1.21
VAPA-203ENST00000577539 PTGER2P43116 358 aa7.5□□□□□ -1.21
VAPA-203ENST00000577539 IRF6O14896 467 aa7.5□□□□□ -1.21
VAPA-203ENST00000577539 EFCAB5A4FU69 1503 aa7.49□□□□□ -1.21
VAPA-203ENST00000577539 WDR97A6NE52 1622 aa7.49□□□□□ -1.21
VAPA-203ENST00000577539 SMYD5Q6GMV2 418 aa7.49□□□□□ -1.21
VAPA-203ENST00000577539 FNBP4Q8N3X1 1017 aaPredicted RBP7.49□□□□□ -1.21
VAPA-203ENST00000577539 NECTIN2Q92692 538 aa7.49□□□□□ -1.21
VAPA-203ENST00000577539 GOPCQ9HD26 462 aa7.49□□□□□ -1.21
VAPA-203ENST00000577539 MICALL2Q8IY33 904 aa7.49□□□□□ -1.21
VAPA-203ENST00000577539 TMEM106CQ9BVX2 250 aa7.49□□□□□ -1.21
VAPA-203ENST00000577539 NPDC1Q9NQX5 325 aaPredicted RBP7.49□□□□□ -1.21
VAPA-203ENST00000577539 BMP2KQ9NSY1 1161 aaPredicted RBP7.49□□□□□ -1.21
VAPA-203ENST00000577539 MAP2K5Q13163 448 aa7.48□□□□□ -1.21
VAPA-203ENST00000577539 CCDC18Q5T9S5 1454 aa7.48□□□□□ -1.21
VAPA-203ENST00000577539 NEFLP07196 543 aa7.47□□□□□ -1.21
VAPA-203ENST00000577539 NCOA2Q15596 1464 aa7.47□□□□□ -1.21
VAPA-203ENST00000577539 AQRO60306 1485 aaKnown RBP eCLIP7.47□□□□□ -1.215e-8■□□□□ 8.1
VAPA-203ENST00000577539 CUL7Q14999 1698 aa7.46□□□□□ -1.21
VAPA-203ENST00000577539 IRX5P78411 483 aaPredicted RBP7.46□□□□□ -1.22
VAPA-203ENST00000577539 PTPRKQ15262 1439 aa7.46□□□□□ -1.22
VAPA-203ENST00000577539 MYOM3Q5VTT5 1437 aa7.46□□□□□ -1.22
VAPA-203ENST00000577539 RSPH6AQ9H0K4 717 aa7.46□□□□□ -1.22
VAPA-203ENST00000577539 CFAP43Q8NDM7 1665 aa7.46□□□□□ -1.22
VAPA-203ENST00000577539 MINK1Q8N4C8 1332 aaPredicted RBP7.46□□□□□ -1.22
VAPA-203ENST00000577539 C19orf67A6NJJ6 358 aa7.45□□□□□ -1.22
VAPA-203ENST00000577539 LAMC3Q9Y6N6 1575 aa7.45□□□□□ -1.22
VAPA-203ENST00000577539 PTGDRQ13258 359 aa7.45□□□□□ -1.22
VAPA-203ENST00000577539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.45□□□□□ -1.22
VAPA-203ENST00000577539 CNGB1Q14028 1251 aaPredicted RBP7.44□□□□□ -1.22
VAPA-203ENST00000577539 SNAPC4Q5SXM2 1469 aa7.44□□□□□ -1.22
VAPA-203ENST00000577539 ZNF777Q9ULD5 760 aaPredicted RBP7.44□□□□□ -1.22
VAPA-203ENST00000577539 SPDYE16A6NNV3 312 aaPredicted RBP7.44□□□□□ -1.22
VAPA-203ENST00000577539 UACAQ9BZF9 1416 aa7.44□□□□□ -1.22
VAPA-203ENST00000577539 ZRANB1Q9UGI0 708 aa7.43□□□□□ -1.22
VAPA-203ENST00000577539 HFM1A2PYH4 1435 aa7.43□□□□□ -1.22
VAPA-203ENST00000577539 NAIPQ13075 1403 aa7.43□□□□□ -1.22
VAPA-203ENST00000577539 KDM4FA0A1W2PPD8 638 aa7.42□□□□□ -1.22
VAPA-203ENST00000577539 CD44P16070 742 aaKnown RBP7.42□□□□□ -1.22
VAPA-203ENST00000577539 POLR3GLQ9BT43 218 aa7.42□□□□□ -1.22
VAPA-203ENST00000577539 CTTNBP2Q8WZ74 1663 aa7.42□□□□□ -1.22
VAPA-203ENST00000577539 C2orf72A6NCS6 295 aa7.42□□□□□ -1.22
VAPA-203ENST00000577539 CHRDL2Q6WN34 429 aa7.42□□□□□ -1.22
VAPA-203ENST00000577539 TIE1P35590 1138 aa7.42□□□□□ -1.22
VAPA-203ENST00000577539 MPHOSPH9Q99550 1183 aa7.42□□□□□ -1.22
VAPA-203ENST00000577539 CDK11AQ9UQ88 783 aaPredicted RBP7.42□□□□□ -1.22
VAPA-203ENST00000577539 HSPA5P11021 654 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms