RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 FOXD4L4Q8WXT5 416 aaPredicted RBP15.52■□□□□ 0.08
CSPG4P13-202ENST00000567704 LAMC3Q9Y6N6 1575 aa15.52■□□□□ 0.08
CSPG4P13-202ENST00000567704 COG6Q9Y2V7 657 aa15.52■□□□□ 0.07
CSPG4P13-202ENST00000567704 POGKQ9P215 609 aa15.51■□□□□ 0.07
CSPG4P13-202ENST00000567704 NUP155O75694 1391 aa15.51■□□□□ 0.07
CSPG4P13-202ENST00000567704 SKOR2Q2VWA4 1001 aaPredicted RBP15.51■□□□□ 0.07
CSPG4P13-202ENST00000567704 BCL2L13Q9BXK5 485 aa15.51■□□□□ 0.07
CSPG4P13-202ENST00000567704 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
CSPG4P13-202ENST00000567704 C14orf37Q86TY3 774 aa15.5■□□□□ 0.07
CSPG4P13-202ENST00000567704 PHLDB1Q86UU1 1377 aa15.5■□□□□ 0.07
CSPG4P13-202ENST00000567704 NOL8Q76FK4 1167 aaKnown RBP15.49■□□□□ 0.07
CSPG4P13-202ENST00000567704 CHMP5Q9NZZ3 219 aa15.49■□□□□ 0.07
CSPG4P13-202ENST00000567704 FGD5Q6ZNL6 1462 aa15.48■□□□□ 0.07
CSPG4P13-202ENST00000567704 PANK3Q9H999 370 aa15.47■□□□□ 0.07
CSPG4P13-202ENST00000567704 RRP7AQ9Y3A4 280 aaKnown RBP15.47■□□□□ 0.07
CSPG4P13-202ENST00000567704 CGNL1Q0VF96 1302 aa15.47■□□□□ 0.07
CSPG4P13-202ENST00000567704 SAFB2Q14151 953 aaKnown RBP eCLIP15.46■□□□□ 0.07
CSPG4P13-202ENST00000567704 WASHC2AQ641Q2 1341 aa15.46■□□□□ 0.07
CSPG4P13-202ENST00000567704 CCDC7Q96M83 1385 aa15.45■□□□□ 0.06
CSPG4P13-202ENST00000567704 KIAA1211Q6ZU35 1233 aa15.45■□□□□ 0.06
CSPG4P13-202ENST00000567704 SRPK2P78362 688 aaKnown RBP15.44■□□□□ 0.06
CSPG4P13-202ENST00000567704 KIF7Q2M1P5 1343 aa15.44■□□□□ 0.06
CSPG4P13-202ENST00000567704 USP47Q96K76 1375 aa15.44■□□□□ 0.06
CSPG4P13-202ENST00000567704 ST18O60284 1047 aa15.43■□□□□ 0.06
CSPG4P13-202ENST00000567704 MRE11P49959 708 aa15.43■□□□□ 0.06
CSPG4P13-202ENST00000567704 BACH2Q9BYV9 841 aa15.43■□□□□ 0.06
CSPG4P13-202ENST00000567704 FHOD3Q2V2M9 1422 aa15.43■□□□□ 0.06
CSPG4P13-202ENST00000567704 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
CSPG4P13-202ENST00000567704 FOXD4L6Q3SYB3 417 aaPredicted RBP15.42■□□□□ 0.06
CSPG4P13-202ENST00000567704 FOXD4L3Q6VB84 417 aaPredicted RBP15.42■□□□□ 0.06
CSPG4P13-202ENST00000567704 CNTLNQ9NXG0 1405 aa15.42■□□□□ 0.06
CSPG4P13-202ENST00000567704 APAF1O14727 1248 aa15.42■□□□□ 0.06
CSPG4P13-202ENST00000567704 CCDC18Q5T9S5 1454 aa15.42■□□□□ 0.06
CSPG4P13-202ENST00000567704 E9PSI1 815 aa15.41■□□□□ 0.06
CSPG4P13-202ENST00000567704 AKNAQ7Z591 1439 aa15.41■□□□□ 0.06
CSPG4P13-202ENST00000567704 PHF14O94880 888 aa15.41■□□□□ 0.06
CSPG4P13-202ENST00000567704 HAP1P54257 671 aaPredicted RBP15.4■□□□□ 0.06
CSPG4P13-202ENST00000567704 R3HCC1Q9Y3T6 440 aaKnown RBP15.4■□□□□ 0.06
CSPG4P13-202ENST00000567704 ANKRD45Q5TZF3 282 aa15.4■□□□□ 0.06
CSPG4P13-202ENST00000567704 ZNF771Q7L3S4 317 aaPredicted RBP15.39■□□□□ 0.05
CSPG4P13-202ENST00000567704 RAD54L2Q9Y4B4 1467 aa15.39■□□□□ 0.05
CSPG4P13-202ENST00000567704 TRIM6-TRIM34B2RNG4 842 aa15.39■□□□□ 0.05
CSPG4P13-202ENST00000567704 CDCA7LQ96GN5 454 aa15.39■□□□□ 0.05
CSPG4P13-202ENST00000567704 A0A0U1RQG5 324 aaPredicted RBP15.38■□□□□ 0.05
CSPG4P13-202ENST00000567704 TRAK2O60296 914 aa15.38■□□□□ 0.05
CSPG4P13-202ENST00000567704 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
CSPG4P13-202ENST00000567704 ANKRD30AQ9BXX3 1397 aa15.37■□□□□ 0.05
CSPG4P13-202ENST00000567704 GAPVD1Q14C86 1478 aa15.37■□□□□ 0.05
CSPG4P13-202ENST00000567704 SOX12O15370 315 aa15.37■□□□□ 0.05
CSPG4P13-202ENST00000567704 CCDC184Q52MB2 194 aa15.37■□□□□ 0.05
CSPG4P13-202ENST00000567704 ZKSCAN2Q63HK3 967 aa15.37■□□□□ 0.05
CSPG4P13-202ENST00000567704 CSPP1Q1MSJ5 1256 aa15.36■□□□□ 0.05
CSPG4P13-202ENST00000567704 C22orf23Q9BZE7 217 aa15.36■□□□□ 0.05
CSPG4P13-202ENST00000567704 IFT140Q96RY7 1462 aa15.35■□□□□ 0.05
CSPG4P13-202ENST00000567704 DNMBPQ6XZF7 1577 aa15.35■□□□□ 0.05
CSPG4P13-202ENST00000567704 NASPP49321 788 aaPredicted RBP15.34■□□□□ 0.05
CSPG4P13-202ENST00000567704 HTATSF1O43719 755 aaKnown RBP15.33■□□□□ 0.05
CSPG4P13-202ENST00000567704 RBM10P98175 930 aaKnown RBP15.33■□□□□ 0.05
CSPG4P13-202ENST00000567704 STK26Q9P289 416 aa15.33■□□□□ 0.04
CSPG4P13-202ENST00000567704 CARMIL2Q6F5E8 1435 aa15.33■□□□□ 0.04
CSPG4P13-202ENST00000567704 TPM2P07951 284 aa15.32■□□□□ 0.04
CSPG4P13-202ENST00000567704 HMMRO75330 724 aa15.32■□□□□ 0.04
CSPG4P13-202ENST00000567704 PANK1Q8TE04 598 aa15.32■□□□□ 0.04
CSPG4P13-202ENST00000567704 ELL2O00472 640 aaPredicted RBP15.31■□□□□ 0.04
CSPG4P13-202ENST00000567704 MCTP1Q6DN14 999 aa15.31■□□□□ 0.04
CSPG4P13-202ENST00000567704 MAP7D2Q96T17 732 aa15.31■□□□□ 0.04
CSPG4P13-202ENST00000567704 CUX1P39880 1505 aa15.31■□□□□ 0.04
CSPG4P13-202ENST00000567704 RTF1Q92541 710 aaKnown RBP15.31■□□□□ 0.04
CSPG4P13-202ENST00000567704 SLC4A10Q6U841 1118 aa15.3■□□□□ 0.04
CSPG4P13-202ENST00000567704 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
CSPG4P13-202ENST00000567704 A0A0G2JS52 829 aa15.3■□□□□ 0.04
CSPG4P13-202ENST00000567704 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
CSPG4P13-202ENST00000567704 ZNF592Q92610 1267 aa15.3■□□□□ 0.04
CSPG4P13-202ENST00000567704 AQRO60306 1485 aaKnown RBP eCLIP15.29■□□□□ 0.04
CSPG4P13-202ENST00000567704 POLA1P09884 1462 aaPredicted RBP15.29■□□□□ 0.04
CSPG4P13-202ENST00000567704 HDGFL2Q7Z4V5 671 aaPredicted RBP15.29■□□□□ 0.04
CSPG4P13-202ENST00000567704 KANK1Q14678 1352 aa15.29■□□□□ 0.04
CSPG4P13-202ENST00000567704 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
CSPG4P13-202ENST00000567704 GNL2Q13823 731 aaKnown RBP15.28■□□□□ 0.04
CSPG4P13-202ENST00000567704 IGF1RP08069 1367 aa15.28■□□□□ 0.04
CSPG4P13-202ENST00000567704 KIF16BQ96L93 1317 aa15.27■□□□□ 0.04
CSPG4P13-202ENST00000567704 LNPKQ9C0E8 428 aa15.27■□□□□ 0.04
CSPG4P13-202ENST00000567704 GRIN2BQ13224 1484 aa15.27■□□□□ 0.04
CSPG4P13-202ENST00000567704 RNF214Q8ND24 703 aa15.27■□□□□ 0.04
CSPG4P13-202ENST00000567704 UACAQ9BZF9 1416 aa15.27■□□□□ 0.03
CSPG4P13-202ENST00000567704 TPM4P67936 248 aa15.27■□□□□ 0.03
CSPG4P13-202ENST00000567704 DDX19BQ9UMR2 479 aa15.27■□□□□ 0.03
CSPG4P13-202ENST00000567704 TULP1O00294 542 aaPredicted RBP15.27■□□□□ 0.03
CSPG4P13-202ENST00000567704 RRP9O43818 475 aaKnown RBP15.26■□□□□ 0.03
CSPG4P13-202ENST00000567704 EIF3AQ14152 1382 aaKnown RBP15.26■□□□□ 0.03
CSPG4P13-202ENST00000567704 HNRNPMP52272 730 aaKnown RBP eCLIP15.26■□□□□ 0.03
CSPG4P13-202ENST00000567704 NUCB2P80303 420 aa15.26■□□□□ 0.03
CSPG4P13-202ENST00000567704 MTERF4Q7Z6M4 381 aaKnown RBP15.26■□□□□ 0.03
CSPG4P13-202ENST00000567704 KIF21BO75037 1637 aa15.26■□□□□ 0.03
CSPG4P13-202ENST00000567704 RILPL2Q969X0 211 aa15.26■□□□□ 0.03
CSPG4P13-202ENST00000567704 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
CSPG4P13-202ENST00000567704 BRD4O60885 1362 aaPredicted RBP15.25■□□□□ 0.03
CSPG4P13-202ENST00000567704 OSCARQ8IYS5 282 aa15.25■□□□□ 0.03
CSPG4P13-202ENST00000567704 GOLGA6L1Q8N7Z2 621 aa15.25■□□□□ 0.03
CSPG4P13-202ENST00000567704 ESPNB1AK53 854 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms