RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-215ENST00000565507 ARHGEF5Q12774 1597 aa18■□□□□ 0.47
SCAPER-215ENST00000565507 TRAPPC8Q9Y2L5 1435 aa18■□□□□ 0.47
SCAPER-215ENST00000565507 WDR7Q9Y4E6 1490 aa17.99■□□□□ 0.47
SCAPER-215ENST00000565507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.472e-6■■■□□ 18.3
SCAPER-215ENST00000565507 PPP4R2Q9NY27 417 aa17.99■□□□□ 0.47
SCAPER-215ENST00000565507 ASXL2Q76L83 1435 aa17.98■□□□□ 0.47
SCAPER-215ENST00000565507 EFCAB2Q5VUJ9 269 aa17.97■□□□□ 0.47
SCAPER-215ENST00000565507 ROCK2O75116 1388 aaKnown RBP17.94■□□□□ 0.46
SCAPER-215ENST00000565507 CARD11Q9BXL7 1154 aa17.94■□□□□ 0.46
SCAPER-215ENST00000565507 PLEKHH2Q8IVE3 1493 aa17.94■□□□□ 0.46
SCAPER-215ENST00000565507 POLR3GLQ9BT43 218 aa17.93■□□□□ 0.46
SCAPER-215ENST00000565507 SMG6Q86US8 1419 aaKnown RBP17.92■□□□□ 0.46
SCAPER-215ENST00000565507 ABCC1P33527 1531 aa17.91■□□□□ 0.46
SCAPER-215ENST00000565507 CYB5RLQ6IPT4 315 aa17.9■□□□□ 0.46
SCAPER-215ENST00000565507 ST20-MTHFSA0A0A6YYL1 179 aa17.9■□□□□ 0.46
SCAPER-215ENST00000565507 RSPH4AQ5TD94 716 aa17.89■□□□□ 0.46
SCAPER-215ENST00000565507 DCAF11Q8TEB1 546 aa17.89■□□□□ 0.46
SCAPER-215ENST00000565507 PNISRQ8TF01 805 aaKnown RBP17.89■□□□□ 0.46
SCAPER-215ENST00000565507 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.46
SCAPER-215ENST00000565507 FAM135AQ9P2D6 1515 aa17.89■□□□□ 0.45
SCAPER-215ENST00000565507 CNGB1Q14028 1251 aaPredicted RBP17.89■□□□□ 0.45
SCAPER-215ENST00000565507 MSH5O43196 834 aa17.88■□□□□ 0.45
SCAPER-215ENST00000565507 FANCIQ9NVI1 1328 aa17.88■□□□□ 0.45
SCAPER-215ENST00000565507 FANCAO15360 1455 aa17.88■□□□□ 0.45
SCAPER-215ENST00000565507 NPM1P06748 294 aaKnown RBP eCLIP17.87■□□□□ 0.45
SCAPER-215ENST00000565507 B4GALNT3Q6L9W6 998 aa17.86■□□□□ 0.45
SCAPER-215ENST00000565507 RNF123Q5XPI4 1314 aa17.86■□□□□ 0.45
SCAPER-215ENST00000565507 SPAG9O60271 1321 aaKnown RBP17.86■□□□□ 0.45
SCAPER-215ENST00000565507 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
SCAPER-215ENST00000565507 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
SCAPER-215ENST00000565507 MAST1Q9Y2H9 1570 aa17.84■□□□□ 0.45
SCAPER-215ENST00000565507 ABCA9Q8IUA7 1624 aa17.83■□□□□ 0.45
SCAPER-215ENST00000565507 SCAPERQ9BY12 1400 aa17.83■□□□□ 0.45
SCAPER-215ENST00000565507 LRPPRCP42704 1394 aaKnown RBP17.83■□□□□ 0.44
SCAPER-215ENST00000565507 E9PCH4 1651 aa17.83■□□□□ 0.44
SCAPER-215ENST00000565507 PLA2R1Q13018 1463 aa17.83■□□□□ 0.44
SCAPER-215ENST00000565507 PRAG1Q86YV5 1406 aa17.83■□□□□ 0.44
SCAPER-215ENST00000565507 TMC1Q8TDI8 760 aa17.83■□□□□ 0.44
SCAPER-215ENST00000565507 KTN1Q86UP2 1357 aaKnown RBP17.82■□□□□ 0.44
SCAPER-215ENST00000565507 ADGRL1O94910 1474 aa17.81■□□□□ 0.44
SCAPER-215ENST00000565507 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
SCAPER-215ENST00000565507 TRPM1Q7Z4N2 1603 aa17.81■□□□□ 0.44
SCAPER-215ENST00000565507 UNC13BO14795 1591 aa17.81■□□□□ 0.44
SCAPER-215ENST00000565507 BRD4O60885 1362 aaPredicted RBP17.8■□□□□ 0.44
SCAPER-215ENST00000565507 RALBP1Q15311 655 aa17.8■□□□□ 0.44
SCAPER-215ENST00000565507 PLXNC1O60486 1568 aa17.8■□□□□ 0.44
SCAPER-215ENST00000565507 MYBBP1AQ9BQG0 1328 aaKnown RBP17.79■□□□□ 0.44
SCAPER-215ENST00000565507 ZFYVE16Q7Z3T8 1539 aa17.79■□□□□ 0.44
SCAPER-215ENST00000565507 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
SCAPER-215ENST00000565507 GPRASP1Q5JY77 1395 aa17.78■□□□□ 0.44
SCAPER-215ENST00000565507 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.44
SCAPER-215ENST00000565507 A2MP01023 1474 aa17.77■□□□□ 0.43
SCAPER-215ENST00000565507 NBPF1Q3BBV0 1214 aa17.77■□□□□ 0.43
SCAPER-215ENST00000565507 CD109Q6YHK3 1445 aa17.77■□□□□ 0.43
SCAPER-215ENST00000565507 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
SCAPER-215ENST00000565507 ARAP3Q8WWN8 1544 aa17.75■□□□□ 0.43
SCAPER-215ENST00000565507 IQGAP3Q86VI3 1631 aa17.74■□□□□ 0.43
SCAPER-215ENST00000565507 RAPGEF3O95398 923 aa17.74■□□□□ 0.43
SCAPER-215ENST00000565507 PER1O15534 1290 aaPredicted RBP17.74■□□□□ 0.43
SCAPER-215ENST00000565507 PARD3Q8TEW0 1356 aa17.74■□□□□ 0.43
SCAPER-215ENST00000565507 KIF3BO15066 747 aa17.73■□□□□ 0.43
SCAPER-215ENST00000565507 ERBINQ96RT1 1412 aa17.73■□□□□ 0.43
SCAPER-215ENST00000565507 ATP10AO60312 1499 aa17.72■□□□□ 0.43
SCAPER-215ENST00000565507 ATP7AQ04656 1500 aa17.72■□□□□ 0.43
SCAPER-215ENST00000565507 LAMC1P11047 1609 aa17.72■□□□□ 0.43
SCAPER-215ENST00000565507 MAGI2Q86UL8 1455 aa17.71■□□□□ 0.43
SCAPER-215ENST00000565507 PRDM15P57071 1507 aaPredicted RBP17.71■□□□□ 0.43
SCAPER-215ENST00000565507 TESK2Q96S53 571 aa17.71■□□□□ 0.43
SCAPER-215ENST00000565507 RIMBP3CA6NJZ7 1639 aa17.71■□□□□ 0.42
SCAPER-215ENST00000565507 RIMBP3BA6NNM3 1639 aa17.71■□□□□ 0.42
SCAPER-215ENST00000565507 RIMBP3Q9UFD9 1639 aa17.71■□□□□ 0.42
SCAPER-215ENST00000565507 COL17A1Q9UMD9 1497 aaPredicted RBP17.7■□□□□ 0.42
SCAPER-215ENST00000565507 NLRP13Q86W25 1043 aa17.7■□□□□ 0.42
SCAPER-215ENST00000565507 INO80Q9ULG1 1556 aaPredicted RBP17.69■□□□□ 0.42
SCAPER-215ENST00000565507 DNAJC5Q9H3Z4 198 aa17.69■□□□□ 0.42
SCAPER-215ENST00000565507 RTEL1-TNFRSF6BF6WH68 1400 aa17.69■□□□□ 0.42
SCAPER-215ENST00000565507 DISP3Q9P2K9 1392 aa17.68■□□□□ 0.42
SCAPER-215ENST00000565507 CCDC136Q96JN2 1154 aa17.67■□□□□ 0.42
SCAPER-215ENST00000565507 WASHC2CQ9Y4E1 1318 aa17.66■□□□□ 0.42
SCAPER-215ENST00000565507 EIF2AK4Q9P2K8 1649 aaKnown RBP17.65■□□□□ 0.42
SCAPER-215ENST00000565507 KIDINS220Q9ULH0 1771 aa17.65■□□□□ 0.42
SCAPER-215ENST00000565507 POGZQ7Z3K3 1410 aa17.63■□□□□ 0.41
SCAPER-215ENST00000565507 ZNF518AQ6AHZ1 1483 aa17.62■□□□□ 0.41
SCAPER-215ENST00000565507 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
SCAPER-215ENST00000565507 RRP1P56182 461 aaKnown RBP17.61■□□□□ 0.41
SCAPER-215ENST00000565507 PANK3Q9H999 370 aa17.61■□□□□ 0.41
SCAPER-215ENST00000565507 RNF17Q9BXT8 1623 aaKnown RBP17.6■□□□□ 0.41
SCAPER-215ENST00000565507 PDE3BQ13370 1112 aa17.6■□□□□ 0.41
SCAPER-215ENST00000565507 GGT6Q6P531 493 aa17.6■□□□□ 0.41
SCAPER-215ENST00000565507 INSRP06213 1382 aa17.6■□□□□ 0.41
SCAPER-215ENST00000565507 MROH1Q8NDA8 1641 aa17.59■□□□□ 0.41
SCAPER-215ENST00000565507 TMF1P82094 1093 aa17.59■□□□□ 0.41
SCAPER-215ENST00000565507 RCAN3Q9UKA8 241 aa17.59■□□□□ 0.41
SCAPER-215ENST00000565507 UGGT1Q9NYU2 1555 aa17.58■□□□□ 0.41
SCAPER-215ENST00000565507 ZMYM4Q5VZL5 1548 aa17.58■□□□□ 0.41
SCAPER-215ENST00000565507 CC2D1BQ5T0F9 858 aaKnown RBP17.58■□□□□ 0.41
SCAPER-215ENST00000565507 ERICH6Q7L0X2 663 aa17.57■□□□□ 0.4
SCAPER-215ENST00000565507 BLMP54132 1417 aaPredicted RBP17.57■□□□□ 0.4
SCAPER-215ENST00000565507 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
SCAPER-215ENST00000565507 FRMPD1Q5SYB0 1578 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms