RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 ABCC2Q92887 1545 aa12.6□□□□□ -0.39
TCF4-224ENST00000564403 KIF15Q9NS87 1388 aa12.6□□□□□ -0.39
TCF4-224ENST00000564403 TTC37Q6PGP7 1564 aa12.59□□□□□ -0.39
TCF4-224ENST00000564403 NAP1L5Q96NT1 182 aaPredicted RBP12.59□□□□□ -0.39
TCF4-224ENST00000564403 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.59□□□□□ -0.39
TCF4-224ENST00000564403 CDC42BPBQ9Y5S2 1711 aa12.58□□□□□ -0.39
TCF4-224ENST00000564403 ADGRL2O95490 1459 aa12.58□□□□□ -0.4
TCF4-224ENST00000564403 SAMD9LQ8IVG5 1584 aa12.58□□□□□ -0.4
TCF4-224ENST00000564403 ARHGAP5Q13017 1502 aa12.58□□□□□ -0.4
TCF4-224ENST00000564403 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
TCF4-224ENST00000564403 PHF23Q9BUL5 403 aaPredicted RBP12.57□□□□□ -0.4
TCF4-224ENST00000564403 RPRD2Q5VT52 1461 aaKnown RBP12.57□□□□□ -0.4
TCF4-224ENST00000564403 CROCC2H7BZ55 1655 aa12.56□□□□□ -0.4
TCF4-224ENST00000564403 SYCP2Q9BX26 1530 aa12.56□□□□□ -0.4
TCF4-224ENST00000564403 WASHC2AQ641Q2 1341 aa12.55□□□□□ -0.4
TCF4-224ENST00000564403 ADGBQ8N7X0 1667 aa12.55□□□□□ -0.4
TCF4-224ENST00000564403 EIF4G2P78344 907 aaKnown RBP eCLIP12.55□□□□□ -0.42e-7■■■■■ 31.9
TCF4-224ENST00000564403 IRX6P78412 446 aaPredicted RBP12.55□□□□□ -0.4
TCF4-224ENST00000564403 AFAP1Q8N556 730 aa12.55□□□□□ -0.4
TCF4-224ENST00000564403 KIAA1107Q9UPP5 1409 aa12.54□□□□□ -0.4
TCF4-224ENST00000564403 ARHGEF12Q9NZN5 1544 aa12.54□□□□□ -0.4
TCF4-224ENST00000564403 HSP90B1P14625 803 aaKnown RBP12.54□□□□□ -0.4
TCF4-224ENST00000564403 KDM2AQ9Y2K7 1162 aa12.54□□□□□ -0.4
TCF4-224ENST00000564403 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
TCF4-224ENST00000564403 CCDC141Q6ZP82 1450 aa12.53□□□□□ -0.4
TCF4-224ENST00000564403 TEX14Q8IWB6 1497 aa12.53□□□□□ -0.4
TCF4-224ENST00000564403 PREX2Q70Z35 1606 aa12.53□□□□□ -0.4
TCF4-224ENST00000564403 ZCCHC11Q5TAX3 1644 aaKnown RBP12.52□□□□□ -0.4
TCF4-224ENST00000564403 OSCARQ8IYS5 282 aa12.52□□□□□ -0.41
TCF4-224ENST00000564403 EFCAB2Q5VUJ9 269 aa12.52□□□□□ -0.41
TCF4-224ENST00000564403 SHANK2Q9UPX8 1470 aa12.51□□□□□ -0.41
TCF4-224ENST00000564403 ANP32CO43423 234 aa12.5□□□□□ -0.41
TCF4-224ENST00000564403 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
TCF4-224ENST00000564403 PLCH2O75038 1416 aa12.5□□□□□ -0.41
TCF4-224ENST00000564403 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
TCF4-224ENST00000564403 RGL3Q3MIN7 710 aa12.5□□□□□ -0.41
TCF4-224ENST00000564403 TRAPPC8Q9Y2L5 1435 aa12.5□□□□□ -0.41
TCF4-224ENST00000564403 ARHGEF5Q12774 1597 aa12.49□□□□□ -0.41
TCF4-224ENST00000564403 PLEKHH2Q8IVE3 1493 aa12.49□□□□□ -0.41
TCF4-224ENST00000564403 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
TCF4-224ENST00000564403 DCAF11Q8TEB1 546 aa12.48□□□□□ -0.41
TCF4-224ENST00000564403 POLR3GLQ9BT43 218 aa12.48□□□□□ -0.41
TCF4-224ENST00000564403 BCCIPQ9P287 314 aaKnown RBP eCLIP12.48□□□□□ -0.41
TCF4-224ENST00000564403 UHRF1BP1LA0JNW5 1464 aa12.48□□□□□ -0.41
TCF4-224ENST00000564403 MYO5CQ9NQX4 1742 aa12.46□□□□□ -0.41
TCF4-224ENST00000564403 PPP6R1Q9UPN7 881 aa12.45□□□□□ -0.42
TCF4-224ENST00000564403 IGSF3O75054 1194 aa12.45□□□□□ -0.42
TCF4-224ENST00000564403 PLCB2Q00722 1185 aa12.44□□□□□ -0.42
TCF4-224ENST00000564403 SPAG9O60271 1321 aaKnown RBP12.44□□□□□ -0.42
TCF4-224ENST00000564403 FAM135AQ9P2D6 1515 aa12.43□□□□□ -0.42
TCF4-224ENST00000564403 CCDC184Q52MB2 194 aa12.43□□□□□ -0.42
TCF4-224ENST00000564403 KIF7Q2M1P5 1343 aa12.42□□□□□ -0.42
TCF4-224ENST00000564403 SPATA31E1Q6ZUB1 1445 aa12.42□□□□□ -0.42
TCF4-224ENST00000564403 ASXL2Q76L83 1435 aa12.42□□□□□ -0.42
TCF4-224ENST00000564403 WDR7Q9Y4E6 1490 aa12.42□□□□□ -0.42
TCF4-224ENST00000564403 CCDC7Q96M83 1385 aa12.42□□□□□ -0.42
TCF4-224ENST00000564403 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
TCF4-224ENST00000564403 CARD11Q9BXL7 1154 aa12.41□□□□□ -0.42
TCF4-224ENST00000564403 PLA2R1Q13018 1463 aa12.41□□□□□ -0.42
TCF4-224ENST00000564403 NAP1L2Q9ULW6 460 aaPredicted RBP12.4□□□□□ -0.42
TCF4-224ENST00000564403 FANCAO15360 1455 aa12.39□□□□□ -0.43
TCF4-224ENST00000564403 USP47Q96K76 1375 aa12.39□□□□□ -0.43
TCF4-224ENST00000564403 NBPF1Q3BBV0 1214 aa12.39□□□□□ -0.43
TCF4-224ENST00000564403 CCER2I3L3R5 266 aa12.39□□□□□ -0.43
TCF4-224ENST00000564403 ABCC1P33527 1531 aa12.39□□□□□ -0.43
TCF4-224ENST00000564403 KDM5DQ9BY66 1539 aa12.39□□□□□ -0.43
TCF4-224ENST00000564403 SCAPERQ9BY12 1400 aa12.38□□□□□ -0.43
TCF4-224ENST00000564403 ST20-MTHFSA0A0A6YYL1 179 aa12.38□□□□□ -0.43
TCF4-224ENST00000564403 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
TCF4-224ENST00000564403 KIF3BO15066 747 aa12.37□□□□□ -0.43
TCF4-224ENST00000564403 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
TCF4-224ENST00000564403 CYB5RLQ6IPT4 315 aa12.36□□□□□ -0.43
TCF4-224ENST00000564403 MAST1Q9Y2H9 1570 aa12.36□□□□□ -0.43
TCF4-224ENST00000564403 DUOX2Q9NRD8 1548 aa12.35□□□□□ -0.43
TCF4-224ENST00000564403 CNTLNQ9NXG0 1405 aa12.34□□□□□ -0.43
TCF4-224ENST00000564403 PRKRIP1Q9H875 184 aaPredicted RBP12.34□□□□□ -0.43
TCF4-224ENST00000564403 ADGRL1O94910 1474 aa12.34□□□□□ -0.43
TCF4-224ENST00000564403 PLXNC1O60486 1568 aa12.33□□□□□ -0.44
TCF4-224ENST00000564403 SENP3-EIF4A1A0A087X0R7 540 aa12.33□□□□□ -0.44
TCF4-224ENST00000564403 BCORL1Q5H9F3 1711 aa12.32□□□□□ -0.44
TCF4-224ENST00000564403 ROCK2O75116 1388 aaKnown RBP12.32□□□□□ -0.44
TCF4-224ENST00000564403 ERBINQ96RT1 1412 aa12.32□□□□□ -0.44
TCF4-224ENST00000564403 UNC13BO14795 1591 aa12.32□□□□□ -0.44
TCF4-224ENST00000564403 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
TCF4-224ENST00000564403 UHRF1BP1Q6BDS2 1440 aa12.32□□□□□ -0.44
TCF4-224ENST00000564403 FAM9BQ8IZU0 186 aa12.32□□□□□ -0.44
TCF4-224ENST00000564403 SENP3Q9H4L4 574 aaPredicted RBP12.32□□□□□ -0.44
TCF4-224ENST00000564403 HNRNPUQ00839 825 aaKnown RBP eCLIP12.31□□□□□ -0.44
TCF4-224ENST00000564403 ZFYVE16Q7Z3T8 1539 aa12.31□□□□□ -0.44
TCF4-224ENST00000564403 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
TCF4-224ENST00000564403 ABCA9Q8IUA7 1624 aa12.3□□□□□ -0.44
TCF4-224ENST00000564403 A2MP01023 1474 aa12.3□□□□□ -0.44
TCF4-224ENST00000564403 CD109Q6YHK3 1445 aa12.29□□□□□ -0.44
TCF4-224ENST00000564403 SUPT16HQ9Y5B9 1047 aaKnown RBP12.29□□□□□ -0.44
TCF4-224ENST00000564403 RALGAPBQ86X10 1494 aa12.29□□□□□ -0.44
TCF4-224ENST00000564403 MRS2Q9HD23 443 aa12.29□□□□□ -0.44
TCF4-224ENST00000564403 KDM5CP41229 1560 aa12.29□□□□□ -0.44
TCF4-224ENST00000564403 IQGAP3Q86VI3 1631 aa12.29□□□□□ -0.44
TCF4-224ENST00000564403 GGT6Q6P531 493 aa12.28□□□□□ -0.44
TCF4-224ENST00000564403 RTEL1-TNFRSF6BF6WH68 1400 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms