RNA–Protein interactions for RNA: ENST00000562958.6

CNN2-205, Transcript of calponin 2, humanhuman

TSL 2 BASIC

Gene CNN2, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-205ENST00000562958 CCDC141Q6ZP82 1450 aa19.62■□□□□ 0.73
CNN2-205ENST00000562958 PREX2Q70Z35 1606 aa19.61■□□□□ 0.73
CNN2-205ENST00000562958 TRPM1Q7Z4N2 1603 aa19.6■□□□□ 0.73
CNN2-205ENST00000562958 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
CNN2-205ENST00000562958 MAST1Q9Y2H9 1570 aa19.6■□□□□ 0.73
CNN2-205ENST00000562958 INSRP06213 1382 aa19.59■□□□□ 0.73
CNN2-205ENST00000562958 ZMYM4Q5VZL5 1548 aa19.59■□□□□ 0.73
CNN2-205ENST00000562958 CCDC136Q96JN2 1154 aa19.59■□□□□ 0.73
CNN2-205ENST00000562958 POLR3GLQ9BT43 218 aa19.59■□□□□ 0.73
CNN2-205ENST00000562958 BCL11AQ9H165 835 aa19.59■□□□□ 0.73
CNN2-205ENST00000562958 FAM135AQ9P2D6 1515 aa19.58■□□□□ 0.73
CNN2-205ENST00000562958 UNC13BO14795 1591 aa19.58■□□□□ 0.72
CNN2-205ENST00000562958 SAMD9LQ8IVG5 1584 aa19.56■□□□□ 0.72
CNN2-205ENST00000562958 EIF2AK4Q9P2K8 1649 aaKnown RBP19.55■□□□□ 0.72
CNN2-205ENST00000562958 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
CNN2-205ENST00000562958 PDE3BQ13370 1112 aa19.54■□□□□ 0.72
CNN2-205ENST00000562958 PRAG1Q86YV5 1406 aa19.54■□□□□ 0.72
CNN2-205ENST00000562958 GPRASP1Q5JY77 1395 aa19.54■□□□□ 0.72
CNN2-205ENST00000562958 WASHC2CQ9Y4E1 1318 aa19.54■□□□□ 0.72
CNN2-205ENST00000562958 ST20-MTHFSA0A0A6YYL1 179 aa19.54■□□□□ 0.72
CNN2-205ENST00000562958 CCDC144AA2RUR9 1427 aa19.53■□□□□ 0.72
CNN2-205ENST00000562958 PARD3Q8TEW0 1356 aa19.53■□□□□ 0.72
CNN2-205ENST00000562958 NOP58Q9Y2X3 529 aaKnown RBP19.52■□□□□ 0.72
CNN2-205ENST00000562958 NLRP13Q86W25 1043 aa19.51■□□□□ 0.71
CNN2-205ENST00000562958 PLXNC1O60486 1568 aa19.51■□□□□ 0.71
CNN2-205ENST00000562958 DCAF11Q8TEB1 546 aa19.51■□□□□ 0.71
CNN2-205ENST00000562958 IQGAP3Q86VI3 1631 aa19.5■□□□□ 0.71
CNN2-205ENST00000562958 PRDM15P57071 1507 aaPredicted RBP19.5■□□□□ 0.71
CNN2-205ENST00000562958 ANP32AP39687 249 aaKnown RBP19.49■□□□□ 0.71
CNN2-205ENST00000562958 PLEKHH2Q8IVE3 1493 aa19.48■□□□□ 0.71
CNN2-205ENST00000562958 COL17A1Q9UMD9 1497 aaPredicted RBP19.48■□□□□ 0.71
CNN2-205ENST00000562958 FBLN2P98095 1184 aa19.48■□□□□ 0.71
CNN2-205ENST00000562958 ATP10AO60312 1499 aa19.46■□□□□ 0.71
CNN2-205ENST00000562958 RRP1P56182 461 aaKnown RBP19.46■□□□□ 0.71
CNN2-205ENST00000562958 KDM2AQ9Y2K7 1162 aa19.46■□□□□ 0.71
CNN2-205ENST00000562958 HNRNPMP52272 730 aaKnown RBP eCLIP19.45■□□□□ 0.7
CNN2-205ENST00000562958 MYO5CQ9NQX4 1742 aa19.45■□□□□ 0.7
CNN2-205ENST00000562958 A2MP01023 1474 aa19.43■□□□□ 0.7
CNN2-205ENST00000562958 MAGI2Q86UL8 1455 aa19.43■□□□□ 0.7
CNN2-205ENST00000562958 IPO9Q96P70 1041 aaKnown RBP19.43■□□□□ 0.7
CNN2-205ENST00000562958 SYCP2Q9BX26 1530 aa19.42■□□□□ 0.7
CNN2-205ENST00000562958 RCAN3Q9UKA8 241 aa19.42■□□□□ 0.7
CNN2-205ENST00000562958 BLMP54132 1417 aaPredicted RBP19.41■□□□□ 0.7
CNN2-205ENST00000562958 RNF17Q9BXT8 1623 aaKnown RBP19.41■□□□□ 0.7
CNN2-205ENST00000562958 CNGB1Q14028 1251 aaPredicted RBP19.41■□□□□ 0.7
CNN2-205ENST00000562958 DUOX2Q9NRD8 1548 aa19.41■□□□□ 0.7
CNN2-205ENST00000562958 TCERG1O14776 1098 aaKnown RBP19.4■□□□□ 0.7
CNN2-205ENST00000562958 ARHGAP5Q13017 1502 aa19.4■□□□□ 0.7
CNN2-205ENST00000562958 PLA2R1Q13018 1463 aa19.4■□□□□ 0.7
CNN2-205ENST00000562958 PER1O15534 1290 aaPredicted RBP19.39■□□□□ 0.69
CNN2-205ENST00000562958 ERBINQ96RT1 1412 aa19.39■□□□□ 0.69
CNN2-205ENST00000562958 TTC37Q6PGP7 1564 aa19.38■□□□□ 0.69
CNN2-205ENST00000562958 MS4A1P11836 297 aa19.37■□□□□ 0.69
CNN2-205ENST00000562958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.36■□□□□ 0.692e-6■□□□□ 8.3
CNN2-205ENST00000562958 SHROOM2Q13796 1616 aa19.36■□□□□ 0.69
CNN2-205ENST00000562958 ZBTB47Q9UFB7 747 aaPredicted RBP19.34■□□□□ 0.69
CNN2-205ENST00000562958 TMF1P82094 1093 aa19.33■□□□□ 0.69
CNN2-205ENST00000562958 TESK2Q96S53 571 aa19.33■□□□□ 0.68
CNN2-205ENST00000562958 ABCC2Q92887 1545 aa19.31■□□□□ 0.68
CNN2-205ENST00000562958 DISP3Q9P2K9 1392 aa19.31■□□□□ 0.68
CNN2-205ENST00000562958 EXOC6Q8TAG9 804 aa19.3■□□□□ 0.68
CNN2-205ENST00000562958 STAC3Q96MF2 364 aa19.3■□□□□ 0.68
CNN2-205ENST00000562958 DEKP35659 375 aaKnown RBP19.3■□□□□ 0.68
CNN2-205ENST00000562958 PAK3O75914 559 aaPredicted RBP19.29■□□□□ 0.68
CNN2-205ENST00000562958 NBPF1Q3BBV0 1214 aa19.29■□□□□ 0.68
CNN2-205ENST00000562958 IQGAP1P46940 1657 aa19.29■□□□□ 0.68
CNN2-205ENST00000562958 CHD1O14646 1710 aa19.26■□□□□ 0.67
CNN2-205ENST00000562958 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
CNN2-205ENST00000562958 MADDQ8WXG6 1647 aa19.26■□□□□ 0.67
CNN2-205ENST00000562958 SYNMO15061 1565 aa19.26■□□□□ 0.67
CNN2-205ENST00000562958 CLASP1Q7Z460 1538 aa19.26■□□□□ 0.67
CNN2-205ENST00000562958 RTL5Q5HYW3 569 aaPredicted RBP19.25■□□□□ 0.67
CNN2-205ENST00000562958 PANK3Q9H999 370 aa19.25■□□□□ 0.67
CNN2-205ENST00000562958 SPHKAPQ2M3C7 1700 aa19.25■□□□□ 0.67
CNN2-205ENST00000562958 CDCA8Q53HL2 280 aa19.24■□□□□ 0.67
CNN2-205ENST00000562958 CEP152O94986 1710 aa19.24■□□□□ 0.67
CNN2-205ENST00000562958 TRPM2O94759 1503 aa19.23■□□□□ 0.67
CNN2-205ENST00000562958 ABCC1P33527 1531 aa19.23■□□□□ 0.67
CNN2-205ENST00000562958 PLCH2O75038 1416 aa19.23■□□□□ 0.67
CNN2-205ENST00000562958 SCAPERQ9BY12 1400 aa19.23■□□□□ 0.67
CNN2-205ENST00000562958 BACH2Q9BYV9 841 aa19.23■□□□□ 0.67
CNN2-205ENST00000562958 PDE4AP27815 886 aa19.22■□□□□ 0.67
CNN2-205ENST00000562958 NEURL4Q96JN8 1562 aa19.22■□□□□ 0.67
CNN2-205ENST00000562958 KIAA1210Q9ULL0 1709 aa19.22■□□□□ 0.67
CNN2-205ENST00000562958 WDR7Q9Y4E6 1490 aa19.21■□□□□ 0.67
CNN2-205ENST00000562958 ARAP3Q8WWN8 1544 aa19.21■□□□□ 0.67
CNN2-205ENST00000562958 CC2D1BQ5T0F9 858 aaKnown RBP19.21■□□□□ 0.67
CNN2-205ENST00000562958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.21■□□□□ 0.67
CNN2-205ENST00000562958 NPC1L1Q9UHC9 1359 aa19.2■□□□□ 0.66
CNN2-205ENST00000562958 RTEL1-TNFRSF6BF6WH68 1400 aa19.2■□□□□ 0.66
CNN2-205ENST00000562958 SCAF11Q99590 1463 aaKnown RBP19.19■□□□□ 0.66
CNN2-205ENST00000562958 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
CNN2-205ENST00000562958 NBR1Q14596 966 aa19.19■□□□□ 0.66
CNN2-205ENST00000562958 USP35Q9P2H5 1018 aa19.19■□□□□ 0.66
CNN2-205ENST00000562958 PIK3C2GO75747 1445 aa19.19■□□□□ 0.66
CNN2-205ENST00000562958 CDCA7LQ96GN5 454 aa19.18■□□□□ 0.66
CNN2-205ENST00000562958 DEPDC5O75140 1603 aa19.18■□□□□ 0.66
CNN2-205ENST00000562958 UHRF1BP1LA0JNW5 1464 aa19.18■□□□□ 0.66
CNN2-205ENST00000562958 SLC24A1O60721 1099 aa19.17■□□□□ 0.66
CNN2-205ENST00000562958 EFCAB2Q5VUJ9 269 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms