RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 ROCK2O75116 1388 aaKnown RBP11.97□□□□□ -0.49
CLUHP3-206ENST00000562354 ESF1Q9H501 851 aaKnown RBP11.96□□□□□ -0.49
CLUHP3-206ENST00000562354 ERCC6L2Q5T890 1561 aa11.96□□□□□ -0.5
CLUHP3-206ENST00000562354 SYCP2Q9BX26 1530 aa11.95□□□□□ -0.5
CLUHP3-206ENST00000562354 ADGRL2O95490 1459 aa11.95□□□□□ -0.5
CLUHP3-206ENST00000562354 SCAPERQ9BY12 1400 aa11.95□□□□□ -0.5
CLUHP3-206ENST00000562354 IPO9Q96P70 1041 aaKnown RBP11.95□□□□□ -0.5
CLUHP3-206ENST00000562354 GCC2Q8IWJ2 1684 aa11.95□□□□□ -0.5
CLUHP3-206ENST00000562354 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
CLUHP3-206ENST00000562354 WDR7Q9Y4E6 1490 aa11.94□□□□□ -0.5
CLUHP3-206ENST00000562354 NBPF8Q3BBV2 869 aa11.94□□□□□ -0.5
CLUHP3-206ENST00000562354 GLIPR1L2Q4G1C9 344 aa11.94□□□□□ -0.5
CLUHP3-206ENST00000562354 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
CLUHP3-206ENST00000562354 USP35Q9P2H5 1018 aa11.94□□□□□ -0.5
CLUHP3-206ENST00000562354 STAG3Q9UJ98 1225 aa11.94□□□□□ -0.5
CLUHP3-206ENST00000562354 UHRF1BP1LA0JNW5 1464 aa11.93□□□□□ -0.5
CLUHP3-206ENST00000562354 WDR43Q15061 677 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLUHP3-206ENST00000562354 ASXL2Q76L83 1435 aa11.93□□□□□ -0.5
CLUHP3-206ENST00000562354 PRKRIP1Q9H875 184 aaPredicted RBP11.92□□□□□ -0.5
CLUHP3-206ENST00000562354 USP47Q96K76 1375 aa11.92□□□□□ -0.5
CLUHP3-206ENST00000562354 ADCY10Q96PN6 1610 aa11.92□□□□□ -0.5
CLUHP3-206ENST00000562354 FANCAO15360 1455 aa11.92□□□□□ -0.5
CLUHP3-206ENST00000562354 NEFMP07197 916 aa11.92□□□□□ -0.5
CLUHP3-206ENST00000562354 BECN1Q14457 450 aa11.92□□□□□ -0.5
CLUHP3-206ENST00000562354 RALBP1Q15311 655 aa11.91□□□□□ -0.5
CLUHP3-206ENST00000562354 CNTLNQ9NXG0 1405 aa11.91□□□□□ -0.5
CLUHP3-206ENST00000562354 PDE3BQ13370 1112 aa11.91□□□□□ -0.5
CLUHP3-206ENST00000562354 ADGRL1O94910 1474 aa11.91□□□□□ -0.5
CLUHP3-206ENST00000562354 KDM5BQ9UGL1 1544 aa11.91□□□□□ -0.5
CLUHP3-206ENST00000562354 CD109Q6YHK3 1445 aa11.9□□□□□ -0.5
CLUHP3-206ENST00000562354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLUHP3-206ENST00000562354 WASHC2CQ9Y4E1 1318 aa11.9□□□□□ -0.5
CLUHP3-206ENST00000562354 FAM69CQ0P6D2 419 aa11.9□□□□□ -0.5
CLUHP3-206ENST00000562354 CLASP1Q7Z460 1538 aa11.9□□□□□ -0.51
CLUHP3-206ENST00000562354 KDM6BO15054 1643 aa11.89□□□□□ -0.51
CLUHP3-206ENST00000562354 PZPP20742 1482 aa11.89□□□□□ -0.51
CLUHP3-206ENST00000562354 ARID4BQ4LE39 1312 aaPredicted RBP11.89□□□□□ -0.51
CLUHP3-206ENST00000562354 CDCA8Q53HL2 280 aa11.88□□□□□ -0.51
CLUHP3-206ENST00000562354 MBD5Q9P267 1494 aa11.88□□□□□ -0.51
CLUHP3-206ENST00000562354 TRAPPC8Q9Y2L5 1435 aa11.88□□□□□ -0.51
CLUHP3-206ENST00000562354 WASHC2AQ641Q2 1341 aa11.88□□□□□ -0.51
CLUHP3-206ENST00000562354 ST20-MTHFSA0A0A6YYL1 179 aa11.88□□□□□ -0.51
CLUHP3-206ENST00000562354 SHROOM2Q13796 1616 aa11.88□□□□□ -0.51
CLUHP3-206ENST00000562354 ARHGEF5Q12774 1597 aa11.88□□□□□ -0.51
CLUHP3-206ENST00000562354 TMF1P82094 1093 aa11.87□□□□□ -0.51
CLUHP3-206ENST00000562354 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
CLUHP3-206ENST00000562354 CCDC7Q96M83 1385 aa11.87□□□□□ -0.51
CLUHP3-206ENST00000562354 TTC37Q6PGP7 1564 aa11.86□□□□□ -0.51
CLUHP3-206ENST00000562354 SALL2Q9Y467 1007 aaPredicted RBP11.86□□□□□ -0.51
CLUHP3-206ENST00000562354 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
CLUHP3-206ENST00000562354 SAMD9LQ8IVG5 1584 aa11.86□□□□□ -0.51
CLUHP3-206ENST00000562354 CDC42BPAQ5VT25 1732 aa11.85□□□□□ -0.51
CLUHP3-206ENST00000562354 KIF7Q2M1P5 1343 aa11.85□□□□□ -0.51
CLUHP3-206ENST00000562354 ZCCHC11Q5TAX3 1644 aaKnown RBP11.85□□□□□ -0.51
CLUHP3-206ENST00000562354 PREX2Q70Z35 1606 aa11.85□□□□□ -0.51
CLUHP3-206ENST00000562354 ERBINQ96RT1 1412 aa11.85□□□□□ -0.51
CLUHP3-206ENST00000562354 MS4A1P11836 297 aa11.84□□□□□ -0.51
CLUHP3-206ENST00000562354 RCAN3Q9UKA8 241 aa11.84□□□□□ -0.51
CLUHP3-206ENST00000562354 RAPGEF3O95398 923 aa11.84□□□□□ -0.51
CLUHP3-206ENST00000562354 KTN1Q86UP2 1357 aaKnown RBP11.83□□□□□ -0.51
CLUHP3-206ENST00000562354 MYO5CQ9NQX4 1742 aa11.83□□□□□ -0.51
CLUHP3-206ENST00000562354 MLECQ14165 292 aa11.83□□□□□ -0.52
CLUHP3-206ENST00000562354 FAM135AQ9P2D6 1515 aa11.83□□□□□ -0.52
CLUHP3-206ENST00000562354 ANP32BQ92688 251 aaKnown RBP11.83□□□□□ -0.52
CLUHP3-206ENST00000562354 STAC3Q96MF2 364 aa11.82□□□□□ -0.52
CLUHP3-206ENST00000562354 SENP3Q9H4L4 574 aaPredicted RBP11.82□□□□□ -0.52
CLUHP3-206ENST00000562354 LAS1LQ9Y4W2 734 aaKnown RBP11.82□□□□□ -0.52
CLUHP3-206ENST00000562354 RTEL1-TNFRSF6BF6WH68 1400 aa11.81□□□□□ -0.52
CLUHP3-206ENST00000562354 DHX29Q7Z478 1369 aaKnown RBP11.81□□□□□ -0.52
CLUHP3-206ENST00000562354 NLRP13Q86W25 1043 aa11.8□□□□□ -0.52
CLUHP3-206ENST00000562354 KNSTRNQ9Y448 316 aa11.79□□□□□ -0.52
CLUHP3-206ENST00000562354 MYBBP1AQ9BQG0 1328 aaKnown RBP11.79□□□□□ -0.52
CLUHP3-206ENST00000562354 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
CLUHP3-206ENST00000562354 NBPF1Q3BBV0 1214 aa11.78□□□□□ -0.52
CLUHP3-206ENST00000562354 TEX14Q8IWB6 1497 aa11.78□□□□□ -0.52
CLUHP3-206ENST00000562354 PLPPR3Q6T4P5 718 aa11.78□□□□□ -0.52
CLUHP3-206ENST00000562354 ZNF518AQ6AHZ1 1483 aa11.78□□□□□ -0.52
CLUHP3-206ENST00000562354 DENND4BO75064 1496 aaPredicted RBP11.77□□□□□ -0.52
CLUHP3-206ENST00000562354 L1TD1Q5T7N2 865 aaKnown RBP11.77□□□□□ -0.53
CLUHP3-206ENST00000562354 ABCC1P33527 1531 aa11.77□□□□□ -0.53
CLUHP3-206ENST00000562354 C11orf95C9JLR9 678 aaPredicted RBP11.76□□□□□ -0.53
CLUHP3-206ENST00000562354 CC2D1BQ5T0F9 858 aaKnown RBP11.76□□□□□ -0.53
CLUHP3-206ENST00000562354 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
CLUHP3-206ENST00000562354 CROCC2H7BZ55 1655 aa11.76□□□□□ -0.53
CLUHP3-206ENST00000562354 SMG6Q86US8 1419 aaKnown RBP11.76□□□□□ -0.53
CLUHP3-206ENST00000562354 RRP1P56182 461 aaKnown RBP11.75□□□□□ -0.53
CLUHP3-206ENST00000562354 ARHGEF12Q9NZN5 1544 aa11.75□□□□□ -0.53
CLUHP3-206ENST00000562354 TRHP20396 242 aaPredicted RBP11.75□□□□□ -0.53
CLUHP3-206ENST00000562354 CDC42BPBQ9Y5S2 1711 aa11.75□□□□□ -0.53
CLUHP3-206ENST00000562354 ATP7AQ04656 1500 aa11.74□□□□□ -0.53
CLUHP3-206ENST00000562354 A2MP01023 1474 aa11.73□□□□□ -0.53
CLUHP3-206ENST00000562354 PDE4AP27815 886 aa11.73□□□□□ -0.53
CLUHP3-206ENST00000562354 NUTM2DQ5VT03 806 aaPredicted RBP11.73□□□□□ -0.53
CLUHP3-206ENST00000562354 ARAP3Q8WWN8 1544 aa11.72□□□□□ -0.53
CLUHP3-206ENST00000562354 RALGAPBQ86X10 1494 aa11.72□□□□□ -0.53
CLUHP3-206ENST00000562354 VGFO15240 615 aaPredicted RBP11.72□□□□□ -0.53
CLUHP3-206ENST00000562354 HSP90AA1P07900 732 aaKnown RBP11.72□□□□□ -0.53
CLUHP3-206ENST00000562354 MAST1Q9Y2H9 1570 aa11.72□□□□□ -0.53
CLUHP3-206ENST00000562354 BRD4O60885 1362 aaPredicted RBP11.72□□□□□ -0.53
CLUHP3-206ENST00000562354 KDM5DQ9BY66 1539 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms