RNA–Protein interactions for RNA: ENST00000560980.5

LRRC49-226, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 1,443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-226ENST00000560980 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
LRRC49-226ENST00000560980 EFCAB5A4FU69 1503 aa10.28□□□□□ -0.76
LRRC49-226ENST00000560980 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.77
LRRC49-226ENST00000560980 PDE4AP27815 886 aa10.27□□□□□ -0.77
LRRC49-226ENST00000560980 SNAPC4Q5SXM2 1469 aa10.26□□□□□ -0.77
LRRC49-226ENST00000560980 SYNJ2O15056 1496 aa10.25□□□□□ -0.77
LRRC49-226ENST00000560980 LARP6Q9BRS8 491 aaKnown RBP10.24□□□□□ -0.77
LRRC49-226ENST00000560980 SAMD9Q5K651 1589 aa10.24□□□□□ -0.77
LRRC49-226ENST00000560980 VPS8Q8N3P4 1428 aa10.24□□□□□ -0.77
LRRC49-226ENST00000560980 SPNS2Q8IVW8 549 aa10.24□□□□□ -0.77
LRRC49-226ENST00000560980 IQGAP2Q13576 1575 aa10.23□□□□□ -0.77
LRRC49-226ENST00000560980 GRIN2AQ12879 1464 aa10.23□□□□□ -0.77
LRRC49-226ENST00000560980 ARHGAP35Q9NRY4 1499 aa10.23□□□□□ -0.77
LRRC49-226ENST00000560980 NCKAP5LQ9HCH0 1330 aa10.23□□□□□ -0.77
LRRC49-226ENST00000560980 ARAP1Q96P48 1450 aa10.22□□□□□ -0.77
LRRC49-226ENST00000560980 P3H3Q8IVL6 736 aa10.22□□□□□ -0.77
LRRC49-226ENST00000560980 CRISPLD2Q9H0B8 497 aa10.22□□□□□ -0.77
LRRC49-226ENST00000560980 CHD1O14646 1710 aa10.22□□□□□ -0.77
LRRC49-226ENST00000560980 ST18O60284 1047 aa10.21□□□□□ -0.78
LRRC49-226ENST00000560980 TMC2Q8TDI7 906 aa10.21□□□□□ -0.78
LRRC49-226ENST00000560980 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.78
LRRC49-226ENST00000560980 TMEM121BQ9BXQ6 578 aaPredicted RBP10.21□□□□□ -0.78
LRRC49-226ENST00000560980 NBR1Q14596 966 aa10.2□□□□□ -0.78
LRRC49-226ENST00000560980 C3orf67Q6ZVT6 689 aa10.19□□□□□ -0.78
LRRC49-226ENST00000560980 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.19□□□□□ -0.78
LRRC49-226ENST00000560980 KIAA0586Q9BVV6 1533 aa10.19□□□□□ -0.78
LRRC49-226ENST00000560980 UGGT2Q9NYU1 1516 aa10.19□□□□□ -0.78
LRRC49-226ENST00000560980 TPRNQ4KMQ1 711 aa10.18□□□□□ -0.78
LRRC49-226ENST00000560980 CEP170Q5SW79 1584 aa10.18□□□□□ -0.78
LRRC49-226ENST00000560980 NUP160Q12769 1436 aa10.18□□□□□ -0.78
LRRC49-226ENST00000560980 GPHNQ9NQX3 736 aaPredicted RBP10.17□□□□□ -0.78
LRRC49-226ENST00000560980 MFSD10Q14728 455 aa10.16□□□□□ -0.78
LRRC49-226ENST00000560980 E2F4Q16254 413 aa10.16□□□□□ -0.78
LRRC49-226ENST00000560980 PPP1R15BQ5SWA1 713 aa10.16□□□□□ -0.78
LRRC49-226ENST00000560980 KCNV2Q8TDN2 545 aa10.16□□□□□ -0.78
LRRC49-226ENST00000560980 MAP3K1Q13233 1512 aa10.15□□□□□ -0.78
LRRC49-226ENST00000560980 CFAP43Q8NDM7 1665 aa10.15□□□□□ -0.78
LRRC49-226ENST00000560980 KIAA0556O60303 1618 aa10.13□□□□□ -0.79
LRRC49-226ENST00000560980 C2orf72A6NCS6 295 aa10.13□□□□□ -0.79
LRRC49-226ENST00000560980 PCF11O94913 1555 aaKnown RBP10.13□□□□□ -0.79
LRRC49-226ENST00000560980 FMN1Q68DA7 1419 aa10.12□□□□□ -0.79
LRRC49-226ENST00000560980 FYCO1Q9BQS8 1478 aa10.12□□□□□ -0.79
LRRC49-226ENST00000560980 SHROOM2Q13796 1616 aa10.12□□□□□ -0.79
LRRC49-226ENST00000560980 SNPHO15079 494 aa10.11□□□□□ -0.79
LRRC49-226ENST00000560980 DSG2Q14126 1118 aa10.11□□□□□ -0.79
LRRC49-226ENST00000560980 LRRIQ1Q96JM4 1722 aa10.11□□□□□ -0.79
LRRC49-226ENST00000560980 CHMP7Q8WUX9 453 aaPredicted RBP10.1□□□□□ -0.79
LRRC49-226ENST00000560980 TIAM1Q13009 1591 aa10.1□□□□□ -0.79
LRRC49-226ENST00000560980 FOXK1P85037 733 aa10.09□□□□□ -0.79
LRRC49-226ENST00000560980 CASKIN1Q8WXD9 1431 aa10.09□□□□□ -0.79
LRRC49-226ENST00000560980 DISP1Q96F81 1524 aa10.08□□□□□ -0.8
LRRC49-226ENST00000560980 TMEM92Q6UXU6 159 aa10.08□□□□□ -0.8
LRRC49-226ENST00000560980 PLPP6Q8IY26 295 aa10.08□□□□□ -0.8
LRRC49-226ENST00000560980 FHOD3Q2V2M9 1422 aa10.08□□□□□ -0.8
LRRC49-226ENST00000560980 KIF3CO14782 793 aa10.07□□□□□ -0.8
LRRC49-226ENST00000560980 ARHGEF1Q92888 912 aaKnown RBP10.07□□□□□ -0.8
LRRC49-226ENST00000560980 HECW1Q76N89 1606 aa10.07□□□□□ -0.8
LRRC49-226ENST00000560980 TRIM26Q12899 539 aaPredicted RBP10.07□□□□□ -0.8
LRRC49-226ENST00000560980 CLASP1Q7Z460 1538 aa10.06□□□□□ -0.8
LRRC49-226ENST00000560980 RANGAP1P46060 587 aaPredicted RBP10.06□□□□□ -0.8
LRRC49-226ENST00000560980 CAMK2BQ13554 666 aa10.05□□□□□ -0.8
LRRC49-226ENST00000560980 CARMIL2Q6F5E8 1435 aa10.04□□□□□ -0.8
LRRC49-226ENST00000560980 RAPGEF6Q8TEU7 1601 aa10.04□□□□□ -0.8
LRRC49-226ENST00000560980 CCDC18Q5T9S5 1454 aa10.03□□□□□ -0.8
LRRC49-226ENST00000560980 MARVELD3Q96A59 401 aa10.02□□□□□ -0.81
LRRC49-226ENST00000560980 LRRC9Q6ZRR7 1453 aa10□□□□□ -0.81
LRRC49-226ENST00000560980 DPYSL4O14531 572 aa9.99□□□□□ -0.81
LRRC49-226ENST00000560980 UPF1Q92900 1129 aaKnown RBP eCLIP9.99□□□□□ -0.81
LRRC49-226ENST00000560980 JPH4Q96JJ6 628 aa9.99□□□□□ -0.81
LRRC49-226ENST00000560980 EMILIN3Q9NT22 766 aa9.99□□□□□ -0.81
LRRC49-226ENST00000560980 ABCA8O94911 1581 aa9.99□□□□□ -0.81
LRRC49-226ENST00000560980 SUPT6HQ7KZ85 1726 aaKnown RBP9.99□□□□□ -0.81
LRRC49-226ENST00000560980 EHBP1L1Q8N3D4 1523 aa9.98□□□□□ -0.81
LRRC49-226ENST00000560980 ARIH1Q9Y4X5 557 aaPredicted RBP9.98□□□□□ -0.81
LRRC49-226ENST00000560980 EPRSP07814 1512 aaKnown RBP9.97□□□□□ -0.81
LRRC49-226ENST00000560980 TULP1O00294 542 aaPredicted RBP9.97□□□□□ -0.81
LRRC49-226ENST00000560980 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
LRRC49-226ENST00000560980 PRG4Q92954 1404 aaPredicted RBP9.96□□□□□ -0.82
LRRC49-226ENST00000560980 HOXB3P14651 431 aaPredicted RBP9.96□□□□□ -0.82
LRRC49-226ENST00000560980 PCGF6Q9BYE7 350 aa9.96□□□□□ -0.82
LRRC49-226ENST00000560980 NUP153P49790 1475 aaKnown RBP9.95□□□□□ -0.82
LRRC49-226ENST00000560980 ADCY10Q96PN6 1610 aa9.94□□□□□ -0.82
LRRC49-226ENST00000560980 SEMA3EO15041 775 aa9.94□□□□□ -0.82
LRRC49-226ENST00000560980 RRBP1Q9P2E9 1410 aaKnown RBP9.93□□□□□ -0.82
LRRC49-226ENST00000560980 POTEB3A0JP26 581 aa9.93□□□□□ -0.82
LRRC49-226ENST00000560980 EMP3P54852 163 aa9.93□□□□□ -0.82
LRRC49-226ENST00000560980 KANK4Q5T7N3 995 aaPredicted RBP9.93□□□□□ -0.82
LRRC49-226ENST00000560980 POTEBQ6S5H4 581 aa9.93□□□□□ -0.82
LRRC49-226ENST00000560980 ARHGEF11O15085 1522 aa9.93□□□□□ -0.82
LRRC49-226ENST00000560980 TBC1D12O60347 775 aa9.92□□□□□ -0.82
LRRC49-226ENST00000560980 PPARGC1BQ86YN6 1023 aaKnown RBP9.92□□□□□ -0.82
LRRC49-226ENST00000560980 ERCC6L2Q5T890 1561 aa9.92□□□□□ -0.82
LRRC49-226ENST00000560980 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
LRRC49-226ENST00000560980 OXER1Q8TDS5 423 aa9.91□□□□□ -0.82
LRRC49-226ENST00000560980 MAGI3Q5TCQ9 1506 aa9.91□□□□□ -0.82
LRRC49-226ENST00000560980 PLB1Q6P1J6 1458 aa9.91□□□□□ -0.82
LRRC49-226ENST00000560980 ZNF316A6NFI3 1004 aaPredicted RBP9.9□□□□□ -0.82
LRRC49-226ENST00000560980 PDIA6Q15084 440 aa9.9□□□□□ -0.82
LRRC49-226ENST00000560980 SMYD5Q6GMV2 418 aa9.9□□□□□ -0.82
LRRC49-226ENST00000560980 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms