RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
TRPM1-212ENST00000560801 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRPM1-212ENST00000560801 GPRASP1Q5JY77 1395 aa12.91□□□□□ -0.34
TRPM1-212ENST00000560801 TNRQ92752 1358 aa12.89□□□□□ -0.35
TRPM1-212ENST00000560801 MORC1Q86VD1 984 aa12.89□□□□□ -0.35
TRPM1-212ENST00000560801 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
TRPM1-212ENST00000560801 DDX10Q13206 875 aaKnown RBP12.88□□□□□ -0.35
TRPM1-212ENST00000560801 LRRC9Q6ZRR7 1453 aa12.88□□□□□ -0.35
TRPM1-212ENST00000560801 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
TRPM1-212ENST00000560801 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
TRPM1-212ENST00000560801 LMTK3Q96Q04 1460 aa12.88□□□□□ -0.35
TRPM1-212ENST00000560801 PLCH2O75038 1416 aa12.88□□□□□ -0.35
TRPM1-212ENST00000560801 KIF14Q15058 1648 aa12.88□□□□□ -0.35
TRPM1-212ENST00000560801 USP35Q9P2H5 1018 aa12.88□□□□□ -0.35
TRPM1-212ENST00000560801 SALL2Q9Y467 1007 aaPredicted RBP12.88□□□□□ -0.35
TRPM1-212ENST00000560801 NGLY1Q96IV0 654 aa12.88□□□□□ -0.35
TRPM1-212ENST00000560801 ZNF330Q9Y3S2 320 aaPredicted RBP12.87□□□□□ -0.35
TRPM1-212ENST00000560801 UHRF1BP1Q6BDS2 1440 aa12.87□□□□□ -0.35
TRPM1-212ENST00000560801 RAB3GAP2Q9H2M9 1393 aa12.86□□□□□ -0.35
TRPM1-212ENST00000560801 EHBP1L1Q8N3D4 1523 aa12.86□□□□□ -0.35
TRPM1-212ENST00000560801 TMEM132EQ6IEE7 984 aa12.86□□□□□ -0.35
TRPM1-212ENST00000560801 EVC2Q86UK5 1308 aa12.86□□□□□ -0.35
TRPM1-212ENST00000560801 CLSPNQ9HAW4 1339 aa12.86□□□□□ -0.35
TRPM1-212ENST00000560801 CCDC141Q6ZP82 1450 aa12.86□□□□□ -0.35
TRPM1-212ENST00000560801 RBM33Q96EV2 1170 aaKnown RBP12.85□□□□□ -0.35
TRPM1-212ENST00000560801 NCKAP5LQ9HCH0 1330 aa12.85□□□□□ -0.35
TRPM1-212ENST00000560801 ADAMTS2O95450 1211 aa12.85□□□□□ -0.35
TRPM1-212ENST00000560801 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
TRPM1-212ENST00000560801 SYTL4Q96C24 671 aaPredicted RBP12.85□□□□□ -0.35
TRPM1-212ENST00000560801 MIA2Q96PC5 1412 aa12.85□□□□□ -0.35
TRPM1-212ENST00000560801 ZNF518AQ6AHZ1 1483 aa12.84□□□□□ -0.35
TRPM1-212ENST00000560801 STRN4Q9NRL3 753 aa12.84□□□□□ -0.35
TRPM1-212ENST00000560801 STAC3Q96MF2 364 aa12.84□□□□□ -0.35
TRPM1-212ENST00000560801 TMX4Q9H1E5 349 aaPredicted RBP12.83□□□□□ -0.36
TRPM1-212ENST00000560801 RTF1Q92541 710 aaKnown RBP12.83□□□□□ -0.36
TRPM1-212ENST00000560801 NUTM2GQ5VZR2 741 aa12.82□□□□□ -0.36
TRPM1-212ENST00000560801 FAM135AQ9P2D6 1515 aa12.82□□□□□ -0.36
TRPM1-212ENST00000560801 ZNF316A6NFI3 1004 aaPredicted RBP12.82□□□□□ -0.36
TRPM1-212ENST00000560801 UGGT2Q9NYU1 1516 aa12.82□□□□□ -0.36
TRPM1-212ENST00000560801 MSH6P52701 1360 aa12.82□□□□□ -0.36
TRPM1-212ENST00000560801 DHX29Q7Z478 1369 aaKnown RBP12.82□□□□□ -0.36
TRPM1-212ENST00000560801 COG3Q96JB2 828 aa12.82□□□□□ -0.36
TRPM1-212ENST00000560801 PMFBP1Q8TBY8 1022 aa12.82□□□□□ -0.36
TRPM1-212ENST00000560801 PRDM11Q9NQV5 511 aa12.82□□□□□ -0.36
TRPM1-212ENST00000560801 IDI1Q13907 227 aa12.81□□□□□ -0.36
TRPM1-212ENST00000560801 L3MBTL2Q969R5 705 aa12.81□□□□□ -0.36
TRPM1-212ENST00000560801 PNNQ9H307 717 aaKnown RBP12.81□□□□□ -0.36
TRPM1-212ENST00000560801 TARBP1Q13395 1621 aaKnown RBP12.81□□□□□ -0.36
TRPM1-212ENST00000560801 NLRP6P59044 892 aa12.81□□□□□ -0.36
TRPM1-212ENST00000560801 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
TRPM1-212ENST00000560801 LAS1LQ9Y4W2 734 aaKnown RBP12.8□□□□□ -0.36
TRPM1-212ENST00000560801 NLRP2Q9NX02 1062 aa12.8□□□□□ -0.36
TRPM1-212ENST00000560801 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
TRPM1-212ENST00000560801 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
TRPM1-212ENST00000560801 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
TRPM1-212ENST00000560801 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
TRPM1-212ENST00000560801 XPCQ01831 940 aaPredicted RBP12.79□□□□□ -0.36
TRPM1-212ENST00000560801 PDE3BQ13370 1112 aa12.79□□□□□ -0.36
TRPM1-212ENST00000560801 DIEXFQ68CQ4 756 aaKnown RBP12.79□□□□□ -0.36
TRPM1-212ENST00000560801 PBRM1Q86U86 1689 aa12.79□□□□□ -0.36
TRPM1-212ENST00000560801 CNTLNQ9NXG0 1405 aa12.78□□□□□ -0.36
TRPM1-212ENST00000560801 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
TRPM1-212ENST00000560801 KIAA0556O60303 1618 aa12.78□□□□□ -0.36
TRPM1-212ENST00000560801 ZMYM3Q14202 1370 aa12.78□□□□□ -0.36
TRPM1-212ENST00000560801 PRAM1Q96QH2 718 aa12.77□□□□□ -0.37
TRPM1-212ENST00000560801 RAPGEF6Q8TEU7 1601 aa12.77□□□□□ -0.37
TRPM1-212ENST00000560801 CHD1O14646 1710 aa12.77□□□□□ -0.37
TRPM1-212ENST00000560801 RPGRIP1LQ68CZ1 1315 aa12.77□□□□□ -0.37
TRPM1-212ENST00000560801 CFAP70Q5T0N1 1121 aa12.76□□□□□ -0.37
TRPM1-212ENST00000560801 CENPJQ9HC77 1338 aaPredicted RBP12.76□□□□□ -0.37
TRPM1-212ENST00000560801 A2MP01023 1474 aa12.76□□□□□ -0.37
TRPM1-212ENST00000560801 NUP153P49790 1475 aaKnown RBP12.76□□□□□ -0.37
TRPM1-212ENST00000560801 MRS2Q9HD23 443 aa12.76□□□□□ -0.37
TRPM1-212ENST00000560801 TIMELESSQ9UNS1 1208 aa12.76□□□□□ -0.37
TRPM1-212ENST00000560801 ATP10AO60312 1499 aa12.76□□□□□ -0.37
TRPM1-212ENST00000560801 ABCA5Q8WWZ7 1642 aa12.75□□□□□ -0.37
TRPM1-212ENST00000560801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRPM1-212ENST00000560801 RAPGEF4Q8WZA2 1011 aa12.75□□□□□ -0.37
TRPM1-212ENST00000560801 GTF2E1P29083 439 aaPredicted RBP12.74□□□□□ -0.37
TRPM1-212ENST00000560801 RRBP1Q9P2E9 1410 aaKnown RBP12.74□□□□□ -0.37
TRPM1-212ENST00000560801 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
TRPM1-212ENST00000560801 UHRF1BP1LA0JNW5 1464 aa12.74□□□□□ -0.37
TRPM1-212ENST00000560801 NEO1Q92859 1461 aa12.73□□□□□ -0.37
TRPM1-212ENST00000560801 FOXO3O43524 673 aa12.73□□□□□ -0.37
TRPM1-212ENST00000560801 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
TRPM1-212ENST00000560801 TOM1L2Q6ZVM7 507 aa12.72□□□□□ -0.37
TRPM1-212ENST00000560801 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
TRPM1-212ENST00000560801 DISP1Q96F81 1524 aa12.72□□□□□ -0.37
TRPM1-212ENST00000560801 CAMSAP2Q08AD1 1489 aa12.71□□□□□ -0.37
TRPM1-212ENST00000560801 DAPK1P53355 1430 aa12.71□□□□□ -0.37
TRPM1-212ENST00000560801 TRAPPC8Q9Y2L5 1435 aa12.71□□□□□ -0.38
TRPM1-212ENST00000560801 KDM6BO15054 1643 aa12.7□□□□□ -0.38
TRPM1-212ENST00000560801 C8orf37Q96NL8 207 aa12.7□□□□□ -0.38
TRPM1-212ENST00000560801 RIMBP3CA6NJZ7 1639 aa12.7□□□□□ -0.38
TRPM1-212ENST00000560801 RIMBP3BA6NNM3 1639 aa12.7□□□□□ -0.38
TRPM1-212ENST00000560801 RIMBP3Q9UFD9 1639 aa12.7□□□□□ -0.38
TRPM1-212ENST00000560801 ERBINQ96RT1 1412 aa12.7□□□□□ -0.38
TRPM1-212ENST00000560801 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
TRPM1-212ENST00000560801 LRPPRCP42704 1394 aaKnown RBP12.69□□□□□ -0.38
TRPM1-212ENST00000560801 U2AF1L5P0DN76 240 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms