RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 CAMSAP2Q08AD1 1489 aa25.15■■□□□ 1.62
SEMA4B-215ENST00000560089 CDC42BPAQ5VT25 1732 aa25.14■■□□□ 1.61
SEMA4B-215ENST00000560089 KDM5BQ9UGL1 1544 aa25.12■■□□□ 1.61
SEMA4B-215ENST00000560089 HNRNPMP52272 730 aaKnown RBP eCLIP25.12■■□□□ 1.61
SEMA4B-215ENST00000560089 ABCC5O15440 1437 aa25.12■■□□□ 1.61
SEMA4B-215ENST00000560089 DAPK1P53355 1430 aa25.12■■□□□ 1.61
SEMA4B-215ENST00000560089 UHRF1BP1LA0JNW5 1464 aa25.12■■□□□ 1.61
SEMA4B-215ENST00000560089 NAIPQ13075 1403 aa25.11■■□□□ 1.61
SEMA4B-215ENST00000560089 CLCN1P35523 988 aa25.11■■□□□ 1.61
SEMA4B-215ENST00000560089 TTC37Q6PGP7 1564 aa25.1■■□□□ 1.61
SEMA4B-215ENST00000560089 ITSN2Q9NZM3 1697 aa25.1■■□□□ 1.61
SEMA4B-215ENST00000560089 L1TD1Q5T7N2 865 aaKnown RBP25.1■■□□□ 1.61
SEMA4B-215ENST00000560089 HFM1A2PYH4 1435 aa25.09■■□□□ 1.61
SEMA4B-215ENST00000560089 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
SEMA4B-215ENST00000560089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.08■■□□□ 1.61
SEMA4B-215ENST00000560089 HSPA5P11021 654 aaKnown RBP25.07■■□□□ 1.6
SEMA4B-215ENST00000560089 EXOC6Q8TAG9 804 aa25.07■■□□□ 1.6
SEMA4B-215ENST00000560089 POGKQ9P215 609 aa25.04■■□□□ 1.6
SEMA4B-215ENST00000560089 KDM6BO15054 1643 aa25.04■■□□□ 1.6
SEMA4B-215ENST00000560089 CALD1Q05682 793 aaKnown RBP25.03■■□□□ 1.6
SEMA4B-215ENST00000560089 DNMT1P26358 1616 aaKnown RBP25.03■■□□□ 1.6
SEMA4B-215ENST00000560089 PRDM4Q9UKN5 801 aa25.02■■□□□ 1.6
SEMA4B-215ENST00000560089 NPM1P06748 294 aaKnown RBP eCLIP25.02■■□□□ 1.6
SEMA4B-215ENST00000560089 CDC42BPBQ9Y5S2 1711 aa25.02■■□□□ 1.6
SEMA4B-215ENST00000560089 ARHGAP5Q13017 1502 aa25.01■■□□□ 1.59
SEMA4B-215ENST00000560089 PDCL3Q9H2J4 239 aa24.98■■□□□ 1.59
SEMA4B-215ENST00000560089 CENPJQ9HC77 1338 aaPredicted RBP24.98■■□□□ 1.59
SEMA4B-215ENST00000560089 ASXL2Q76L83 1435 aa24.97■■□□□ 1.59
SEMA4B-215ENST00000560089 RRP1P56182 461 aaKnown RBP24.97■■□□□ 1.59
SEMA4B-215ENST00000560089 RGS3P49796 1198 aa24.96■■□□□ 1.59
SEMA4B-215ENST00000560089 PREX2Q70Z35 1606 aa24.96■■□□□ 1.59
SEMA4B-215ENST00000560089 SAMD9LQ8IVG5 1584 aa24.96■■□□□ 1.59
SEMA4B-215ENST00000560089 WDR7Q9Y4E6 1490 aa24.96■■□□□ 1.59
SEMA4B-215ENST00000560089 ARID4BQ4LE39 1312 aaPredicted RBP24.95■■□□□ 1.58
SEMA4B-215ENST00000560089 SENP3-EIF4A1A0A087X0R7 540 aa24.93■■□□□ 1.58
SEMA4B-215ENST00000560089 TSPY4P0CV99 314 aa24.93■■□□□ 1.58
SEMA4B-215ENST00000560089 TSPY10P0CW01 314 aa24.93■■□□□ 1.58
SEMA4B-215ENST00000560089 EIF4G2P78344 907 aaKnown RBP eCLIP24.93■■□□□ 1.58
SEMA4B-215ENST00000560089 FOXD1Q16676 465 aa24.91■■□□□ 1.58
SEMA4B-215ENST00000560089 ARXQ96QS3 562 aa24.91■■□□□ 1.58
SEMA4B-215ENST00000560089 MYO5CQ9NQX4 1742 aa24.91■■□□□ 1.58
SEMA4B-215ENST00000560089 SKAP1Q86WV1 359 aa24.91■■□□□ 1.58
SEMA4B-215ENST00000560089 SYCP2Q9BX26 1530 aa24.91■■□□□ 1.58
SEMA4B-215ENST00000560089 NCOA1Q15788 1441 aa24.9■■□□□ 1.58
SEMA4B-215ENST00000560089 GCC2Q8IWJ2 1684 aa24.89■■□□□ 1.58
SEMA4B-215ENST00000560089 MBD5Q9P267 1494 aa24.89■■□□□ 1.57
SEMA4B-215ENST00000560089 RIMBP3CA6NJZ7 1639 aa24.88■■□□□ 1.57
SEMA4B-215ENST00000560089 RIMBP3BA6NNM3 1639 aa24.88■■□□□ 1.57
SEMA4B-215ENST00000560089 RIMBP3Q9UFD9 1639 aa24.88■■□□□ 1.57
SEMA4B-215ENST00000560089 C9orf84Q5VXU9 1444 aa24.88■■□□□ 1.57
SEMA4B-215ENST00000560089 CCDC7Q96M83 1385 aa24.88■■□□□ 1.57
SEMA4B-215ENST00000560089 PLCH2O75038 1416 aa24.88■■□□□ 1.57
SEMA4B-215ENST00000560089 ROCK1Q13464 1354 aa24.87■■□□□ 1.57
SEMA4B-215ENST00000560089 EFCAB2Q5VUJ9 269 aa24.87■■□□□ 1.57
SEMA4B-215ENST00000560089 TPM2P07951 284 aa24.86■■□□□ 1.57
SEMA4B-215ENST00000560089 XRCC6P12956 609 aaKnown RBP eCLIP24.85■■□□□ 1.578e-7■■■■■ 38
SEMA4B-215ENST00000560089 PDIA4P13667 645 aaKnown RBP24.85■■□□□ 1.57
SEMA4B-215ENST00000560089 BCL11BQ9C0K0 894 aaPredicted RBP24.85■■□□□ 1.57
SEMA4B-215ENST00000560089 CROCC2H7BZ55 1655 aa24.85■■□□□ 1.57
SEMA4B-215ENST00000560089 ARHGEF12Q9NZN5 1544 aa24.84■■□□□ 1.57
SEMA4B-215ENST00000560089 ANKRD30AQ9BXX3 1397 aa24.84■■□□□ 1.57
SEMA4B-215ENST00000560089 GOLGA6L3A6NEY3 463 aa24.81■■□□□ 1.56
SEMA4B-215ENST00000560089 AFAP1Q8N556 730 aa24.81■■□□□ 1.56
SEMA4B-215ENST00000560089 MPHOSPH9Q99550 1183 aa24.81■■□□□ 1.56
SEMA4B-215ENST00000560089 CCDC141Q6ZP82 1450 aa24.81■■□□□ 1.56
SEMA4B-215ENST00000560089 PANK2Q9BZ23 570 aa24.79■■□□□ 1.56
SEMA4B-215ENST00000560089 RCAN3Q9UKA8 241 aa24.79■■□□□ 1.56
SEMA4B-215ENST00000560089 ADGBQ8N7X0 1667 aa24.78■■□□□ 1.56
SEMA4B-215ENST00000560089 KIF15Q9NS87 1388 aa24.78■■□□□ 1.56
SEMA4B-215ENST00000560089 TRAPPC8Q9Y2L5 1435 aa24.77■■□□□ 1.56
SEMA4B-215ENST00000560089 DENND4BO75064 1496 aaPredicted RBP24.77■■□□□ 1.56
SEMA4B-215ENST00000560089 CNGB1Q14028 1251 aaPredicted RBP24.76■■□□□ 1.55
SEMA4B-215ENST00000560089 SLC4A1APQ9BWU0 796 aaKnown RBP24.76■■□□□ 1.55
SEMA4B-215ENST00000560089 ANKRD50Q9ULJ7 1429 aa24.76■■□□□ 1.55
SEMA4B-215ENST00000560089 ADGRL2O95490 1459 aa24.76■■□□□ 1.55
SEMA4B-215ENST00000560089 FAM161AQ3B820 660 aa24.76■■□□□ 1.55
SEMA4B-215ENST00000560089 FANCAO15360 1455 aa24.75■■□□□ 1.55
SEMA4B-215ENST00000560089 ARHGEF5Q12774 1597 aa24.75■■□□□ 1.55
SEMA4B-215ENST00000560089 ESPNB1AK53 854 aa24.74■■□□□ 1.55
SEMA4B-215ENST00000560089 ABCA9Q8IUA7 1624 aa24.72■■□□□ 1.55
SEMA4B-215ENST00000560089 SHANK2Q9UPX8 1470 aa24.72■■□□□ 1.55
SEMA4B-215ENST00000560089 FSD2A1L4K1 749 aa24.71■■□□□ 1.55
SEMA4B-215ENST00000560089 C8orf34Q49A92 452 aa24.7■■□□□ 1.54
SEMA4B-215ENST00000560089 RSPH4AQ5TD94 716 aa24.7■■□□□ 1.54
SEMA4B-215ENST00000560089 KIAA1107Q9UPP5 1409 aa24.7■■□□□ 1.54
SEMA4B-215ENST00000560089 ABCC1P33527 1531 aa24.7■■□□□ 1.54
SEMA4B-215ENST00000560089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.69■■□□□ 1.54
SEMA4B-215ENST00000560089 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
SEMA4B-215ENST00000560089 CD109Q6YHK3 1445 aa24.69■■□□□ 1.54
SEMA4B-215ENST00000560089 PLEKHH2Q8IVE3 1493 aa24.67■■□□□ 1.54
SEMA4B-215ENST00000560089 SCAPERQ9BY12 1400 aa24.66■■□□□ 1.54
SEMA4B-215ENST00000560089 ERBB4Q15303 1308 aa24.66■■□□□ 1.54
SEMA4B-215ENST00000560089 NUP155O75694 1391 aa24.66■■□□□ 1.54
SEMA4B-215ENST00000560089 SPAG9O60271 1321 aaKnown RBP24.65■■□□□ 1.54
SEMA4B-215ENST00000560089 KIF7Q2M1P5 1343 aa24.65■■□□□ 1.54
SEMA4B-215ENST00000560089 ADGRL1O94910 1474 aa24.65■■□□□ 1.54
SEMA4B-215ENST00000560089 PNISRQ8TF01 805 aaKnown RBP24.64■■□□□ 1.54
SEMA4B-215ENST00000560089 KTN1Q86UP2 1357 aaKnown RBP24.64■■□□□ 1.54
SEMA4B-215ENST00000560089 BBXQ8WY36 941 aaPredicted RBP24.64■■□□□ 1.53
SEMA4B-215ENST00000560089 SLKQ9H2G2 1235 aaPredicted RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms