RNA–Protein interactions for RNA: ENST00000560033.5

PSMA4-217, Transcript of proteasome subunit alpha 4, humanhuman

TSL 4

Gene PSMA4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-217ENST00000560033 PBX2P40425 430 aa11.82□□□□□ -0.52
PSMA4-217ENST00000560033 KCNV2Q8TDN2 545 aa11.82□□□□□ -0.52
PSMA4-217ENST00000560033 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
PSMA4-217ENST00000560033 ZNF454Q8N9F8 522 aa11.79□□□□□ -0.52
PSMA4-217ENST00000560033 ARHGEF1Q92888 912 aaKnown RBP11.79□□□□□ -0.52
PSMA4-217ENST00000560033 PCDHGA10Q9Y5H3 936 aa11.79□□□□□ -0.52
PSMA4-217ENST00000560033 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
PSMA4-217ENST00000560033 PHF14O94880 888 aa11.77□□□□□ -0.53
PSMA4-217ENST00000560033 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
PSMA4-217ENST00000560033 ARHGAP33O14559 1287 aa11.76□□□□□ -0.53
PSMA4-217ENST00000560033 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
PSMA4-217ENST00000560033 AXIN2Q9Y2T1 843 aa11.75□□□□□ -0.53
PSMA4-217ENST00000560033 SPNS2Q8IVW8 549 aa11.74□□□□□ -0.53
PSMA4-217ENST00000560033 ZDHHC16Q969W1 377 aa11.74□□□□□ -0.53
PSMA4-217ENST00000560033 ADAM33Q9BZ11 813 aa11.74□□□□□ -0.53
PSMA4-217ENST00000560033 LSM11P83369 360 aaKnown RBP eCLIP11.73□□□□□ -0.53
PSMA4-217ENST00000560033 TYW1BQ6NUM6 668 aa11.72□□□□□ -0.53
PSMA4-217ENST00000560033 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
PSMA4-217ENST00000560033 EPAS1Q99814 870 aa11.72□□□□□ -0.53
PSMA4-217ENST00000560033 PSEN2P49810 448 aa11.71□□□□□ -0.53
PSMA4-217ENST00000560033 DMRTA1Q5VZB9 504 aa11.7□□□□□ -0.54
PSMA4-217ENST00000560033 DDX12PQ92771 950 aa11.7□□□□□ -0.54
PSMA4-217ENST00000560033 FBXW7Q969H0 707 aa11.7□□□□□ -0.54
PSMA4-217ENST00000560033 PRIM1P49642 420 aaKnown RBP11.67□□□□□ -0.54
PSMA4-217ENST00000560033 SLC4A5Q9BY07 1137 aa11.67□□□□□ -0.54
PSMA4-217ENST00000560033 TK2O00142 265 aa11.66□□□□□ -0.54
PSMA4-217ENST00000560033 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
PSMA4-217ENST00000560033 OSBPP22059 807 aa11.65□□□□□ -0.54
PSMA4-217ENST00000560033 PTPREP23469 700 aa11.65□□□□□ -0.54
PSMA4-217ENST00000560033 EN1Q05925 392 aaPredicted RBP11.65□□□□□ -0.54
PSMA4-217ENST00000560033 ABCC8Q09428 1581 aa11.65□□□□□ -0.54
PSMA4-217ENST00000560033 MMRN1Q13201 1228 aa11.63□□□□□ -0.55
PSMA4-217ENST00000560033 NBR1Q14596 966 aa11.63□□□□□ -0.55
PSMA4-217ENST00000560033 C6orf132Q5T0Z8 1188 aa11.63□□□□□ -0.55
PSMA4-217ENST00000560033 ZBED2Q9BTP6 218 aa11.63□□□□□ -0.55
PSMA4-217ENST00000560033 HRO43593 1189 aa11.62□□□□□ -0.55
PSMA4-217ENST00000560033 ADGRD1Q6QNK2 874 aa11.62□□□□□ -0.55
PSMA4-217ENST00000560033 ANKRD13DQ6ZTN6 518 aa11.62□□□□□ -0.55
PSMA4-217ENST00000560033 PPP1R3GB7ZBB8 358 aa11.61□□□□□ -0.55
PSMA4-217ENST00000560033 COL9A1P20849 921 aa11.61□□□□□ -0.55
PSMA4-217ENST00000560033 MLLT3P42568 568 aaPredicted RBP11.61□□□□□ -0.55
PSMA4-217ENST00000560033 CFTRP13569 1480 aa11.61□□□□□ -0.55
PSMA4-217ENST00000560033 VPS9D1Q9Y2B5 631 aa11.6□□□□□ -0.55
PSMA4-217ENST00000560033 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
PSMA4-217ENST00000560033 GRXCR2A6NFK2 248 aa11.59□□□□□ -0.55
PSMA4-217ENST00000560033 PLSCR2Q9NRY7 297 aa11.59□□□□□ -0.55
PSMA4-217ENST00000560033 CADPSQ9ULU8 1353 aa11.58□□□□□ -0.56
PSMA4-217ENST00000560033 KCNH8Q96L42 1107 aa11.58□□□□□ -0.56
PSMA4-217ENST00000560033 SEMA3EO15041 775 aa11.57□□□□□ -0.56
PSMA4-217ENST00000560033 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
PSMA4-217ENST00000560033 FAM9AQ8IZU1 332 aaPredicted RBP11.57□□□□□ -0.56
PSMA4-217ENST00000560033 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
PSMA4-217ENST00000560033 TESPA1A2RU30 521 aaPredicted RBP11.56□□□□□ -0.56
PSMA4-217ENST00000560033 BHMG1C9JSJ3 638 aaPredicted RBP11.56□□□□□ -0.56
PSMA4-217ENST00000560033 MAP3K7O43318 606 aa11.54□□□□□ -0.56
PSMA4-217ENST00000560033 ONECUT3O60422 494 aaPredicted RBP11.53□□□□□ -0.56
PSMA4-217ENST00000560033 LOC105371045A0A1W2PR82 267 aa11.52□□□□□ -0.57
PSMA4-217ENST00000560033 MYT1LQ9UL68 1186 aa11.52□□□□□ -0.57
PSMA4-217ENST00000560033 SYNJ1O43426 1573 aa11.52□□□□□ -0.57
PSMA4-217ENST00000560033 PROX2Q3B8N5 592 aa11.51□□□□□ -0.57
PSMA4-217ENST00000560033 NPDC1Q9NQX5 325 aaPredicted RBP11.51□□□□□ -0.57
PSMA4-217ENST00000560033 CDHR5Q9HBB8 845 aa11.5□□□□□ -0.57
PSMA4-217ENST00000560033 CERKQ8TCT0 537 aa11.48□□□□□ -0.57
PSMA4-217ENST00000560033 RABGEF1Q9UJ41 708 aa11.48□□□□□ -0.57
PSMA4-217ENST00000560033 PRDM2Q13029 1718 aa11.48□□□□□ -0.57
PSMA4-217ENST00000560033 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
PSMA4-217ENST00000560033 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
PSMA4-217ENST00000560033 NESP48681 1621 aa11.46□□□□□ -0.57
PSMA4-217ENST00000560033 RNF166Q96A37 237 aaPredicted RBP11.46□□□□□ -0.57
PSMA4-217ENST00000560033 SOGA1O94964 1423 aa11.45□□□□□ -0.58
PSMA4-217ENST00000560033 TTC13Q8NBP0 860 aa11.45□□□□□ -0.58
PSMA4-217ENST00000560033 FAM198AQ9UFP1 575 aa11.45□□□□□ -0.58
PSMA4-217ENST00000560033 TSKSQ9UJT2 592 aa11.45□□□□□ -0.58
PSMA4-217ENST00000560033 BIVM-ERCC5R4GMW8 1640 aa11.45□□□□□ -0.58
PSMA4-217ENST00000560033 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
PSMA4-217ENST00000560033 CUX1P39880 1505 aa11.45□□□□□ -0.58
PSMA4-217ENST00000560033 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
PSMA4-217ENST00000560033 EEA1Q15075 1411 aa11.44□□□□□ -0.58
PSMA4-217ENST00000560033 RBM27Q9P2N5 1060 aaKnown RBP11.44□□□□□ -0.58
PSMA4-217ENST00000560033 PRSS12P56730 875 aa11.43□□□□□ -0.58
PSMA4-217ENST00000560033 CDCA7LQ96GN5 454 aa11.43□□□□□ -0.58
PSMA4-217ENST00000560033 KIAA1468Q9P260 1216 aa11.43□□□□□ -0.58
PSMA4-217ENST00000560033 PTGDRQ13258 359 aa11.42□□□□□ -0.58
PSMA4-217ENST00000560033 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.58
PSMA4-217ENST00000560033 C3orf80F5H4A9 247 aa11.39□□□□□ -0.59
PSMA4-217ENST00000560033 SMYD5Q6GMV2 418 aa11.39□□□□□ -0.59
PSMA4-217ENST00000560033 LAPTM4BQ86VI4 370 aa11.39□□□□□ -0.59
PSMA4-217ENST00000560033 NBPF3Q9H094 633 aa11.39□□□□□ -0.59
PSMA4-217ENST00000560033 PDS5BQ9NTI5 1447 aa11.39□□□□□ -0.59
PSMA4-217ENST00000560033 GPR37O15354 613 aa11.38□□□□□ -0.59
PSMA4-217ENST00000560033 RBM26Q5T8P6 1007 aaKnown RBP11.38□□□□□ -0.59
PSMA4-217ENST00000560033 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
PSMA4-217ENST00000560033 MRPL50Q8N5N7 158 aaKnown RBP11.37□□□□□ -0.59
PSMA4-217ENST00000560033 PACS2Q86VP3 889 aa11.35□□□□□ -0.59
PSMA4-217ENST00000560033 DNMBPQ6XZF7 1577 aa11.34□□□□□ -0.59
PSMA4-217ENST00000560033 SLC24A1O60721 1099 aa11.34□□□□□ -0.59
PSMA4-217ENST00000560033 PADI6Q6TGC4 694 aa11.34□□□□□ -0.59
PSMA4-217ENST00000560033 FGD5Q6ZNL6 1462 aa11.33□□□□□ -0.6
PSMA4-217ENST00000560033 STAC3Q96MF2 364 aa11.33□□□□□ -0.6
PSMA4-217ENST00000560033 SEPT9Q9UHD8 586 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms