RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 KCNK17Q96T54 332 aa10.27□□□□□ -0.77
FOXN3-218ENST00000557718 ANO8Q9HCE9 1232 aaPredicted RBP10.27□□□□□ -0.77
FOXN3-218ENST00000557718 FANCD2Q9BXW9 1451 aa10.26□□□□□ -0.77
FOXN3-218ENST00000557718 SYNJ1O43426 1573 aa10.26□□□□□ -0.77
FOXN3-218ENST00000557718 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
FOXN3-218ENST00000557718 HRO43593 1189 aa10.25□□□□□ -0.77
FOXN3-218ENST00000557718 EVI5O60447 810 aa10.25□□□□□ -0.77
FOXN3-218ENST00000557718 FOSBP53539 338 aa10.25□□□□□ -0.77
FOXN3-218ENST00000557718 KCNH8Q96L42 1107 aa10.25□□□□□ -0.77
FOXN3-218ENST00000557718 THOC2Q8NI27 1593 aaKnown RBP10.24□□□□□ -0.77
FOXN3-218ENST00000557718 MAP3K9P80192 1104 aa10.23□□□□□ -0.77
FOXN3-218ENST00000557718 BCL2L12Q9HB09 334 aa10.23□□□□□ -0.77
FOXN3-218ENST00000557718 EMILIN3Q9NT22 766 aa10.23□□□□□ -0.77
FOXN3-218ENST00000557718 CUX1P39880 1505 aa10.23□□□□□ -0.77
FOXN3-218ENST00000557718 JPH4Q96JJ6 628 aa10.22□□□□□ -0.77
FOXN3-218ENST00000557718 CEP164Q9UPV0 1460 aa10.22□□□□□ -0.77
FOXN3-218ENST00000557718 BBXQ8WY36 941 aaPredicted RBP10.21□□□□□ -0.77
FOXN3-218ENST00000557718 TOP2BQ02880 1626 aa10.21□□□□□ -0.78
FOXN3-218ENST00000557718 URB2Q14146 1524 aaKnown RBP10.2□□□□□ -0.78
FOXN3-218ENST00000557718 PDS5BQ9NTI5 1447 aa10.2□□□□□ -0.78
FOXN3-218ENST00000557718 DNMBPQ6XZF7 1577 aa10.19□□□□□ -0.78
FOXN3-218ENST00000557718 HCSTQ9UBK5 93 aa10.19□□□□□ -0.78
FOXN3-218ENST00000557718 VPS9D1Q9Y2B5 631 aa10.19□□□□□ -0.78
FOXN3-218ENST00000557718 PTPREP23469 700 aa10.18□□□□□ -0.78
FOXN3-218ENST00000557718 ZDHHC16Q969W1 377 aa10.18□□□□□ -0.78
FOXN3-218ENST00000557718 WRNQ14191 1432 aaPredicted RBP eCLIP10.17□□□□□ -0.78
FOXN3-218ENST00000557718 STAC3Q96MF2 364 aa10.17□□□□□ -0.78
FOXN3-218ENST00000557718 ADAM33Q9BZ11 813 aa10.17□□□□□ -0.78
FOXN3-218ENST00000557718 TOPBP1Q92547 1522 aa10.17□□□□□ -0.78
FOXN3-218ENST00000557718 AMER1Q5JTC6 1135 aaPredicted RBP10.16□□□□□ -0.78
FOXN3-218ENST00000557718 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
FOXN3-218ENST00000557718 WDR62O43379 1518 aa10.16□□□□□ -0.78
FOXN3-218ENST00000557718 WDR97A6NE52 1622 aa10.15□□□□□ -0.78
FOXN3-218ENST00000557718 MRC2Q9UBG0 1479 aa10.15□□□□□ -0.78
FOXN3-218ENST00000557718 CAMK2BQ13554 666 aa10.14□□□□□ -0.79
FOXN3-218ENST00000557718 KCTD12Q96CX2 325 aaKnown RBP10.14□□□□□ -0.79
FOXN3-218ENST00000557718 ERCC6Q03468 1493 aa10.13□□□□□ -0.79
FOXN3-218ENST00000557718 ZBED2Q9BTP6 218 aa10.13□□□□□ -0.79
FOXN3-218ENST00000557718 PCDHGA10Q9Y5H3 936 aa10.13□□□□□ -0.79
FOXN3-218ENST00000557718 RTN4Q9NQC3 1192 aaKnown RBP10.12□□□□□ -0.79
FOXN3-218ENST00000557718 FGD5Q6ZNL6 1462 aa10.11□□□□□ -0.79
FOXN3-218ENST00000557718 SPRYD3Q8NCJ5 442 aa10.11□□□□□ -0.79
FOXN3-218ENST00000557718 BHMG1C9JSJ3 638 aaPredicted RBP10.1□□□□□ -0.79
FOXN3-218ENST00000557718 TARBP1Q13395 1621 aaKnown RBP10.1□□□□□ -0.79
FOXN3-218ENST00000557718 DPYSL4O14531 572 aa10.09□□□□□ -0.79
FOXN3-218ENST00000557718 PLA2G2EQ9NZK7 142 aa10.09□□□□□ -0.79
FOXN3-218ENST00000557718 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.09□□□□□ -0.79
FOXN3-218ENST00000557718 POLA1P09884 1462 aaPredicted RBP10.09□□□□□ -0.79
FOXN3-218ENST00000557718 PHF14O94880 888 aa10.08□□□□□ -0.8
FOXN3-218ENST00000557718 CUX2O14529 1486 aa10.07□□□□□ -0.8
FOXN3-218ENST00000557718 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
FOXN3-218ENST00000557718 FBXW7Q969H0 707 aa10.07□□□□□ -0.8
FOXN3-218ENST00000557718 PPP1R3GB7ZBB8 358 aa10.06□□□□□ -0.8
FOXN3-218ENST00000557718 COL9A1P20849 921 aa10.05□□□□□ -0.8
FOXN3-218ENST00000557718 MRPL50Q8N5N7 158 aaKnown RBP10.05□□□□□ -0.8
FOXN3-218ENST00000557718 RAD54L2Q9Y4B4 1467 aa10.04□□□□□ -0.8
FOXN3-218ENST00000557718 PTPN5P54829 565 aa10.04□□□□□ -0.8
FOXN3-218ENST00000557718 ABCA5Q8WWZ7 1642 aa10.04□□□□□ -0.8
FOXN3-218ENST00000557718 RUSC2Q8N2Y8 1516 aa10.03□□□□□ -0.8
FOXN3-218ENST00000557718 GOLGA8CPA6NN73 597 aa10.03□□□□□ -0.8
FOXN3-218ENST00000557718 EPAS1Q99814 870 aa10.03□□□□□ -0.8
FOXN3-218ENST00000557718 NBPF3Q9H094 633 aa10.03□□□□□ -0.8
FOXN3-218ENST00000557718 PBRM1Q86U86 1689 aa10.02□□□□□ -0.8
FOXN3-218ENST00000557718 PROX2Q3B8N5 592 aa10.02□□□□□ -0.81
FOXN3-218ENST00000557718 SOGA1O94964 1423 aa10.01□□□□□ -0.81
FOXN3-218ENST00000557718 THSD4Q6ZMP0 1018 aa10.01□□□□□ -0.81
FOXN3-218ENST00000557718 PAXIP1Q6ZW49 1069 aaPredicted RBP10.01□□□□□ -0.81
FOXN3-218ENST00000557718 WNT2BQ93097 391 aa10.01□□□□□ -0.81
FOXN3-218ENST00000557718 CFAP44Q96MT7 982 aa10.01□□□□□ -0.81
FOXN3-218ENST00000557718 ABCA10Q8WWZ4 1543 aa10.01□□□□□ -0.81
FOXN3-218ENST00000557718 DDX12PQ92771 950 aa10□□□□□ -0.81
FOXN3-218ENST00000557718 RABGEF1Q9UJ41 708 aa10□□□□□ -0.81
FOXN3-218ENST00000557718 C6orf132Q5T0Z8 1188 aa9.99□□□□□ -0.81
FOXN3-218ENST00000557718 EIF4G3O43432 1585 aaKnown RBP9.99□□□□□ -0.81
FOXN3-218ENST00000557718 PDIA6Q15084 440 aa9.98□□□□□ -0.81
FOXN3-218ENST00000557718 IFT140Q96RY7 1462 aa9.98□□□□□ -0.81
FOXN3-218ENST00000557718 ZNF608Q9ULD9 1512 aaPredicted RBP9.97□□□□□ -0.81
FOXN3-218ENST00000557718 RBM33Q96EV2 1170 aaKnown RBP9.97□□□□□ -0.81
FOXN3-218ENST00000557718 E2F4Q16254 413 aa9.95□□□□□ -0.82
FOXN3-218ENST00000557718 KIAA1468Q9P260 1216 aa9.95□□□□□ -0.82
FOXN3-218ENST00000557718 SPDYE16A6NNV3 312 aaPredicted RBP9.94□□□□□ -0.82
FOXN3-218ENST00000557718 ONECUT3O60422 494 aaPredicted RBP9.93□□□□□ -0.82
FOXN3-218ENST00000557718 NBR1Q14596 966 aa9.93□□□□□ -0.82
FOXN3-218ENST00000557718 LAPTM4BQ86VI4 370 aa9.93□□□□□ -0.82
FOXN3-218ENST00000557718 WDR70Q9NW82 654 aa9.93□□□□□ -0.82
FOXN3-218ENST00000557718 EN1Q05925 392 aaPredicted RBP9.92□□□□□ -0.82
FOXN3-218ENST00000557718 ANKK1Q8NFD2 765 aa9.92□□□□□ -0.82
FOXN3-218ENST00000557718 ARIH1Q9Y4X5 557 aaPredicted RBP9.92□□□□□ -0.82
FOXN3-218ENST00000557718 KIF27Q86VH2 1401 aa9.91□□□□□ -0.82
FOXN3-218ENST00000557718 TDRD9Q8NDG6 1382 aaKnown RBP9.91□□□□□ -0.82
FOXN3-218ENST00000557718 TRIM6-TRIM34B2RNG4 842 aa9.91□□□□□ -0.82
FOXN3-218ENST00000557718 AQRO60306 1485 aaKnown RBP eCLIP9.91□□□□□ -0.826e-7■■□□□ 13.2
FOXN3-218ENST00000557718 GAPVD1Q14C86 1478 aa9.91□□□□□ -0.82
FOXN3-218ENST00000557718 CUL7Q14999 1698 aa9.9□□□□□ -0.82
FOXN3-218ENST00000557718 KIF21BO75037 1637 aa9.9□□□□□ -0.82
FOXN3-218ENST00000557718 ADAMTS12P58397 1594 aa9.9□□□□□ -0.82
FOXN3-218ENST00000557718 ERICH3Q5RHP9 1530 aa9.9□□□□□ -0.82
FOXN3-218ENST00000557718 EEA1Q15075 1411 aa9.9□□□□□ -0.83
FOXN3-218ENST00000557718 MAP3K7O43318 606 aa9.89□□□□□ -0.83
FOXN3-218ENST00000557718 TSR1Q2NL82 804 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms