RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 ABCA10Q8WWZ4 1543 aa13.2□□□□□ -0.3
PPFIA2-228ENST00000553058 DPYSL4O14531 572 aa13.2□□□□□ -0.3
PPFIA2-228ENST00000553058 PDIA6Q15084 440 aa13.2□□□□□ -0.3
PPFIA2-228ENST00000553058 SERPINA10Q9UK55 444 aa13.2□□□□□ -0.3
PPFIA2-228ENST00000553058 SYNJ2O15056 1496 aa13.2□□□□□ -0.3
PPFIA2-228ENST00000553058 GAPVD1Q14C86 1478 aa13.19□□□□□ -0.3
PPFIA2-228ENST00000553058 PROSER2Q86WR7 435 aaPredicted RBP13.19□□□□□ -0.3
PPFIA2-228ENST00000553058 RGS22Q8NE09 1264 aa13.19□□□□□ -0.3
PPFIA2-228ENST00000553058 CHMP7Q8WUX9 453 aaPredicted RBP13.19□□□□□ -0.3
PPFIA2-228ENST00000553058 CCDC97Q96F63 343 aaPredicted RBP13.19□□□□□ -0.3
PPFIA2-228ENST00000553058 PPP1R15BQ5SWA1 713 aa13.18□□□□□ -0.3
PPFIA2-228ENST00000553058 ABCA5Q8WWZ7 1642 aa13.17□□□□□ -0.3
PPFIA2-228ENST00000553058 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
PPFIA2-228ENST00000553058 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
PPFIA2-228ENST00000553058 SYNJ1O43426 1573 aa13.15□□□□□ -0.3
PPFIA2-228ENST00000553058 TMCO4Q5TGY1 634 aa13.14□□□□□ -0.31
PPFIA2-228ENST00000553058 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
PPFIA2-228ENST00000553058 NUTM2FA1L443 756 aa13.13□□□□□ -0.31
PPFIA2-228ENST00000553058 FNBP4Q8N3X1 1017 aaPredicted RBP13.13□□□□□ -0.31
PPFIA2-228ENST00000553058 MTMR7Q9Y216 660 aa13.13□□□□□ -0.31
PPFIA2-228ENST00000553058 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
PPFIA2-228ENST00000553058 TTLL12Q14166 644 aaPredicted RBP13.12□□□□□ -0.31
PPFIA2-228ENST00000553058 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
PPFIA2-228ENST00000553058 GPHNQ9NQX3 736 aaPredicted RBP13.1□□□□□ -0.31
PPFIA2-228ENST00000553058 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
PPFIA2-228ENST00000553058 GNPATO15228 680 aa13.09□□□□□ -0.31
PPFIA2-228ENST00000553058 RETREG2Q8NC44 543 aa13.09□□□□□ -0.31
PPFIA2-228ENST00000553058 POM121Q96HA1 1249 aa13.09□□□□□ -0.31
PPFIA2-228ENST00000553058 GZF1Q9H116 711 aaPredicted RBP13.09□□□□□ -0.31
PPFIA2-228ENST00000553058 MFAP1P55081 439 aaKnown RBP13.08□□□□□ -0.32
PPFIA2-228ENST00000553058 BIVM-ERCC5R4GMW8 1640 aa13.08□□□□□ -0.32
PPFIA2-228ENST00000553058 GRIN2AQ12879 1464 aa13.08□□□□□ -0.32
PPFIA2-228ENST00000553058 NUP160Q12769 1436 aa13.07□□□□□ -0.32
PPFIA2-228ENST00000553058 MS4A1P11836 297 aa13.07□□□□□ -0.32
PPFIA2-228ENST00000553058 CHADLQ6NUI6 762 aa13.07□□□□□ -0.32
PPFIA2-228ENST00000553058 FARP1Q9Y4F1 1045 aaPredicted RBP13.07□□□□□ -0.32
PPFIA2-228ENST00000553058 PITPNM1O00562 1244 aa13.06□□□□□ -0.32
PPFIA2-228ENST00000553058 MAP3K13O43283 966 aa13.06□□□□□ -0.32
PPFIA2-228ENST00000553058 GIGYF2Q6Y7W6 1299 aaKnown RBP13.06□□□□□ -0.32
PPFIA2-228ENST00000553058 ADAMTS12P58397 1594 aa13.06□□□□□ -0.32
PPFIA2-228ENST00000553058 ERCC6L2Q5T890 1561 aa13.06□□□□□ -0.32
PPFIA2-228ENST00000553058 SH3D19Q5HYK7 790 aa13.05□□□□□ -0.32
PPFIA2-228ENST00000553058 FECHP22830 423 aa13.04□□□□□ -0.32
PPFIA2-228ENST00000553058 FHAD1B1AJZ9 1412 aa13.04□□□□□ -0.32
PPFIA2-228ENST00000553058 CEP170Q5SW79 1584 aa13.03□□□□□ -0.32
PPFIA2-228ENST00000553058 HIC1Q14526 733 aa13.03□□□□□ -0.32
PPFIA2-228ENST00000553058 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
PPFIA2-228ENST00000553058 IGSF3O75054 1194 aa13.02□□□□□ -0.33
PPFIA2-228ENST00000553058 IRF5Q13568 498 aa13.02□□□□□ -0.33
PPFIA2-228ENST00000553058 FOXD4L5Q5VV16 416 aaPredicted RBP13.02□□□□□ -0.33
PPFIA2-228ENST00000553058 FOXD4L4Q8WXT5 416 aaPredicted RBP13.02□□□□□ -0.33
PPFIA2-228ENST00000553058 KIF12Q96FN5 646 aa13.01□□□□□ -0.33
PPFIA2-228ENST00000553058 PLSCR2Q9NRY7 297 aa13.01□□□□□ -0.33
PPFIA2-228ENST00000553058 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
PPFIA2-228ENST00000553058 FCHSD2O94868 740 aa13□□□□□ -0.33
PPFIA2-228ENST00000553058 RBM25P49756 843 aaKnown RBP13□□□□□ -0.33
PPFIA2-228ENST00000553058 OXER1Q8TDS5 423 aa12.99□□□□□ -0.33
PPFIA2-228ENST00000553058 DSG2Q14126 1118 aa12.98□□□□□ -0.33
PPFIA2-228ENST00000553058 ZNF428Q96B54 188 aa12.98□□□□□ -0.33
PPFIA2-228ENST00000553058 SHROOM2Q13796 1616 aa12.98□□□□□ -0.33
PPFIA2-228ENST00000553058 REPIN1Q9BWE0 567 aaKnown RBP12.97□□□□□ -0.33
PPFIA2-228ENST00000553058 SKIV2LQ15477 1246 aaKnown RBP12.96□□□□□ -0.33
PPFIA2-228ENST00000553058 OSBPP22059 807 aa12.95□□□□□ -0.34
PPFIA2-228ENST00000553058 GOLGA2Q08379 1002 aa12.94□□□□□ -0.34
PPFIA2-228ENST00000553058 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
PPFIA2-228ENST00000553058 FBXW7Q969H0 707 aa12.93□□□□□ -0.34
PPFIA2-228ENST00000553058 IGF1RP08069 1367 aa12.92□□□□□ -0.34
PPFIA2-228ENST00000553058 PRG4Q92954 1404 aaPredicted RBP12.91□□□□□ -0.34
PPFIA2-228ENST00000553058 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
PPFIA2-228ENST00000553058 ZNF330Q9Y3S2 320 aaPredicted RBP12.91□□□□□ -0.34
PPFIA2-228ENST00000553058 SPDYE5A6NIY4 337 aa12.9□□□□□ -0.34
PPFIA2-228ENST00000553058 PPP1R15AO75807 674 aaPredicted RBP12.9□□□□□ -0.34
PPFIA2-228ENST00000553058 PROCA1Q8NCQ7 364 aaPredicted RBP12.9□□□□□ -0.34
PPFIA2-228ENST00000553058 JPH4Q96JJ6 628 aa12.9□□□□□ -0.34
PPFIA2-228ENST00000553058 TMUB1Q9BVT8 246 aa12.88□□□□□ -0.35
PPFIA2-228ENST00000553058 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
PPFIA2-228ENST00000553058 FOXK1P85037 733 aa12.87□□□□□ -0.35
PPFIA2-228ENST00000553058 ATP1B4Q9UN42 357 aaPredicted RBP12.87□□□□□ -0.35
PPFIA2-228ENST00000553058 PDE4CQ08493 712 aa12.86□□□□□ -0.35
PPFIA2-228ENST00000553058 E9PSI1 815 aa12.85□□□□□ -0.35
PPFIA2-228ENST00000553058 CLCN1P35523 988 aa12.85□□□□□ -0.35
PPFIA2-228ENST00000553058 ACIN1Q9UKV3 1341 aaKnown RBP12.85□□□□□ -0.35
PPFIA2-228ENST00000553058 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
PPFIA2-228ENST00000553058 PTGDRQ13258 359 aa12.84□□□□□ -0.35
PPFIA2-228ENST00000553058 KIF27Q86VH2 1401 aa12.83□□□□□ -0.36
PPFIA2-228ENST00000553058 PATL2C9JE40 543 aaKnown RBP12.83□□□□□ -0.36
PPFIA2-228ENST00000553058 TMEM106CQ9BVX2 250 aa12.83□□□□□ -0.36
PPFIA2-228ENST00000553058 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.36
PPFIA2-228ENST00000553058 TMC2Q8TDI7 906 aa12.82□□□□□ -0.36
PPFIA2-228ENST00000553058 SNRKQ9NRH2 765 aa12.82□□□□□ -0.36
PPFIA2-228ENST00000553058 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
PPFIA2-228ENST00000553058 SSTR3P32745 418 aaPredicted RBP12.81□□□□□ -0.36
PPFIA2-228ENST00000553058 PLPP6Q8IY26 295 aa12.81□□□□□ -0.36
PPFIA2-228ENST00000553058 GPCPD1Q9NPB8 672 aa12.81□□□□□ -0.36
PPFIA2-228ENST00000553058 PTGER2P43116 358 aa12.8□□□□□ -0.36
PPFIA2-228ENST00000553058 BANK1Q8NDB2 785 aa12.8□□□□□ -0.36
PPFIA2-228ENST00000553058 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.8□□□□□ -0.36
PPFIA2-228ENST00000553058 MDM2Q00987 491 aaPredicted RBP12.79□□□□□ -0.36
PPFIA2-228ENST00000553058 DDX12PQ92771 950 aa12.79□□□□□ -0.36
PPFIA2-228ENST00000553058 BEGAINQ9BUH8 593 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms