RNA–Protein interactions for RNA: ENST00000552564.5

ITGA5-211, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 4,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-211ENST00000552564 L3MBTL2Q969R5 705 aa17.5■□□□□ 0.39
ITGA5-211ENST00000552564 GZF1Q9H116 711 aaPredicted RBP17.5■□□□□ 0.39
ITGA5-211ENST00000552564 TERF2IPQ9NYB0 399 aa17.5■□□□□ 0.39
ITGA5-211ENST00000552564 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
ITGA5-211ENST00000552564 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
ITGA5-211ENST00000552564 CUX1P39880 1505 aa17.48■□□□□ 0.39
ITGA5-211ENST00000552564 JPH4Q96JJ6 628 aa17.48■□□□□ 0.39
ITGA5-211ENST00000552564 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
ITGA5-211ENST00000552564 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
ITGA5-211ENST00000552564 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
ITGA5-211ENST00000552564 FOXD1Q16676 465 aa17.46■□□□□ 0.39
ITGA5-211ENST00000552564 GSE1Q14687 1217 aa17.46■□□□□ 0.39
ITGA5-211ENST00000552564 ATP6V1DQ9Y5K8 247 aa17.45■□□□□ 0.38
ITGA5-211ENST00000552564 PDE4AP27815 886 aa17.45■□□□□ 0.38
ITGA5-211ENST00000552564 GOLGA6L1Q8N7Z2 621 aa17.45■□□□□ 0.38
ITGA5-211ENST00000552564 NPHP1O15259 732 aa17.44■□□□□ 0.38
ITGA5-211ENST00000552564 AAMPQ13685 434 aa17.43■□□□□ 0.38
ITGA5-211ENST00000552564 E9PSI1 815 aa17.43■□□□□ 0.38
ITGA5-211ENST00000552564 TNNT3P45378 269 aaPredicted RBP17.42■□□□□ 0.38
ITGA5-211ENST00000552564 HSP90AA2PQ14568 343 aaPredicted RBP17.42■□□□□ 0.38
ITGA5-211ENST00000552564 LRRC9Q6ZRR7 1453 aa17.42■□□□□ 0.38
ITGA5-211ENST00000552564 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
ITGA5-211ENST00000552564 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
ITGA5-211ENST00000552564 CASKIN1Q8WXD9 1431 aa17.41■□□□□ 0.38
ITGA5-211ENST00000552564 RRP1P56182 461 aaKnown RBP17.41■□□□□ 0.38
ITGA5-211ENST00000552564 UACAQ9BZF9 1416 aa17.41■□□□□ 0.38
ITGA5-211ENST00000552564 FGD6Q6ZV73 1430 aa17.4■□□□□ 0.38
ITGA5-211ENST00000552564 KIF16BQ96L93 1317 aa17.4■□□□□ 0.38
ITGA5-211ENST00000552564 APBB1O00213 710 aa17.4■□□□□ 0.38
ITGA5-211ENST00000552564 MYOM3Q5VTT5 1437 aa17.39■□□□□ 0.37
ITGA5-211ENST00000552564 TAOK2Q9UL54 1235 aa17.38■□□□□ 0.37
ITGA5-211ENST00000552564 EFCAB5A4FU69 1503 aa17.38■□□□□ 0.37
ITGA5-211ENST00000552564 FYCO1Q9BQS8 1478 aa17.38■□□□□ 0.37
ITGA5-211ENST00000552564 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
ITGA5-211ENST00000552564 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
ITGA5-211ENST00000552564 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
ITGA5-211ENST00000552564 HNRNPMP52272 730 aaKnown RBP eCLIP17.36■□□□□ 0.37
ITGA5-211ENST00000552564 ZKSCAN2Q63HK3 967 aa17.36■□□□□ 0.37
ITGA5-211ENST00000552564 PTPRGP23470 1445 aa17.35■□□□□ 0.37
ITGA5-211ENST00000552564 DDX49Q9Y6V7 483 aaKnown RBP17.35■□□□□ 0.37
ITGA5-211ENST00000552564 TPM3P06753 285 aa17.34■□□□□ 0.37
ITGA5-211ENST00000552564 TULP1O00294 542 aaPredicted RBP17.34■□□□□ 0.37
ITGA5-211ENST00000552564 GGT6Q6P531 493 aa17.34■□□□□ 0.37
ITGA5-211ENST00000552564 SAFB2Q14151 953 aaKnown RBP eCLIP17.33■□□□□ 0.37
ITGA5-211ENST00000552564 RRBP1Q9P2E9 1410 aaKnown RBP17.33■□□□□ 0.37
ITGA5-211ENST00000552564 CCDC144AA2RUR9 1427 aa17.33■□□□□ 0.36
ITGA5-211ENST00000552564 NOC3LQ8WTT2 800 aaKnown RBP17.33■□□□□ 0.36
ITGA5-211ENST00000552564 GRIN2BQ13224 1484 aa17.33■□□□□ 0.36
ITGA5-211ENST00000552564 STK26Q9P289 416 aa17.33■□□□□ 0.36
ITGA5-211ENST00000552564 CC2D2AQ9P2K1 1620 aa17.33■□□□□ 0.36
ITGA5-211ENST00000552564 HSP90B1P14625 803 aaKnown RBP17.32■□□□□ 0.36
ITGA5-211ENST00000552564 STAC3Q96MF2 364 aa17.32■□□□□ 0.36
ITGA5-211ENST00000552564 CHMP5Q9NZZ3 219 aa17.32■□□□□ 0.36
ITGA5-211ENST00000552564 CLUAP1Q96AJ1 413 aa17.31■□□□□ 0.36
ITGA5-211ENST00000552564 GORABQ5T7V8 394 aa17.31■□□□□ 0.36
ITGA5-211ENST00000552564 REC8O95072 547 aa17.31■□□□□ 0.36
ITGA5-211ENST00000552564 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
ITGA5-211ENST00000552564 TOPBP1Q92547 1522 aa17.3■□□□□ 0.36
ITGA5-211ENST00000552564 DDX19BQ9UMR2 479 aa17.3■□□□□ 0.36
ITGA5-211ENST00000552564 GPS2Q13227 327 aa17.29■□□□□ 0.36
ITGA5-211ENST00000552564 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
ITGA5-211ENST00000552564 SOX12O15370 315 aa17.28■□□□□ 0.36
ITGA5-211ENST00000552564 NCOA2Q15596 1464 aa17.28■□□□□ 0.36
ITGA5-211ENST00000552564 USP47Q96K76 1375 aa17.28■□□□□ 0.36
ITGA5-211ENST00000552564 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
ITGA5-211ENST00000552564 CCDC146Q8IYE0 955 aa17.28■□□□□ 0.36
ITGA5-211ENST00000552564 ROCK1Q13464 1354 aa17.28■□□□□ 0.36
ITGA5-211ENST00000552564 ST20-MTHFSA0A0A6YYL1 179 aa17.28■□□□□ 0.36
ITGA5-211ENST00000552564 GOLGA6L19H0YKK7 550 aa17.28■□□□□ 0.36
ITGA5-211ENST00000552564 SF3A1Q15459 793 aaKnown RBP17.28■□□□□ 0.36
ITGA5-211ENST00000552564 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.36
ITGA5-211ENST00000552564 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.367e-7■■■■□ 23.3
ITGA5-211ENST00000552564 PANK3Q9H999 370 aa17.27■□□□□ 0.35
ITGA5-211ENST00000552564 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.26■□□□□ 0.35
ITGA5-211ENST00000552564 LRRFIP1Q32MZ4 808 aaKnown RBP17.26■□□□□ 0.35
ITGA5-211ENST00000552564 RUFY2Q8WXA3 655 aa17.26■□□□□ 0.35
ITGA5-211ENST00000552564 CRBNQ96SW2 442 aa17.26■□□□□ 0.35
ITGA5-211ENST00000552564 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
ITGA5-211ENST00000552564 KIF3BO15066 747 aa17.25■□□□□ 0.35
ITGA5-211ENST00000552564 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
ITGA5-211ENST00000552564 NUCB2P80303 420 aa17.25■□□□□ 0.35
ITGA5-211ENST00000552564 API5Q9BZZ5 524 aaKnown RBP17.24■□□□□ 0.35
ITGA5-211ENST00000552564 BECN2A8MW95 431 aa17.23■□□□□ 0.35
ITGA5-211ENST00000552564 TPM1P09493 284 aa17.23■□□□□ 0.35
ITGA5-211ENST00000552564 SLC4A10Q6U841 1118 aa17.23■□□□□ 0.35
ITGA5-211ENST00000552564 TAF7LQ5H9L4 462 aa17.23■□□□□ 0.35
ITGA5-211ENST00000552564 SETQ01105 290 aaPredicted RBP17.23■□□□□ 0.35
ITGA5-211ENST00000552564 MTERF4Q7Z6M4 381 aaKnown RBP17.23■□□□□ 0.35
ITGA5-211ENST00000552564 ANKRD45Q5TZF3 282 aa17.22■□□□□ 0.35
ITGA5-211ENST00000552564 NESP48681 1621 aa17.22■□□□□ 0.35
ITGA5-211ENST00000552564 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
ITGA5-211ENST00000552564 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
ITGA5-211ENST00000552564 H3BQV1 296 aa17.22■□□□□ 0.35
ITGA5-211ENST00000552564 TSR1Q2NL82 804 aaKnown RBP17.22■□□□□ 0.35
ITGA5-211ENST00000552564 IFFO2Q5TF58 517 aa17.22■□□□□ 0.35
ITGA5-211ENST00000552564 CCDC70Q6NSX1 233 aa17.22■□□□□ 0.35
ITGA5-211ENST00000552564 PRDM2Q13029 1718 aa17.22■□□□□ 0.35
ITGA5-211ENST00000552564 TIAM1Q13009 1591 aa17.21■□□□□ 0.35
ITGA5-211ENST00000552564 EVC2Q86UK5 1308 aa17.21■□□□□ 0.35
ITGA5-211ENST00000552564 FAM184AQ8NB25 1140 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms