RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 EVI5O60447 810 aa13.86□□□□□ -0.19
BEST3-211ENST00000552295 ANO8Q9HCE9 1232 aaPredicted RBP13.86□□□□□ -0.19
BEST3-211ENST00000552295 CADPSQ9ULU8 1353 aa13.85□□□□□ -0.19
BEST3-211ENST00000552295 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
BEST3-211ENST00000552295 MFSD10Q14728 455 aa13.85□□□□□ -0.19
BEST3-211ENST00000552295 KCTD12Q96CX2 325 aaKnown RBP13.85□□□□□ -0.19
BEST3-211ENST00000552295 PLA2G2EQ9NZK7 142 aa13.85□□□□□ -0.19
BEST3-211ENST00000552295 VPS9D1Q9Y2B5 631 aa13.85□□□□□ -0.19
BEST3-211ENST00000552295 NESP48681 1621 aa13.83□□□□□ -0.2
BEST3-211ENST00000552295 PTPREP23469 700 aa13.83□□□□□ -0.2
BEST3-211ENST00000552295 MAP3K9P80192 1104 aa13.83□□□□□ -0.2
BEST3-211ENST00000552295 JPH4Q96JJ6 628 aa13.83□□□□□ -0.2
BEST3-211ENST00000552295 SLC4A5Q9BY07 1137 aa13.82□□□□□ -0.2
BEST3-211ENST00000552295 ZDHHC16Q969W1 377 aa13.79□□□□□ -0.2
BEST3-211ENST00000552295 ADAM33Q9BZ11 813 aa13.76□□□□□ -0.21
BEST3-211ENST00000552295 EMILIN3Q9NT22 766 aa13.76□□□□□ -0.21
BEST3-211ENST00000552295 ZBED2Q9BTP6 218 aa13.75□□□□□ -0.21
BEST3-211ENST00000552295 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
BEST3-211ENST00000552295 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
BEST3-211ENST00000552295 ABCC8Q09428 1581 aa13.71□□□□□ -0.21
BEST3-211ENST00000552295 GOLGA8CPA6NN73 597 aa13.71□□□□□ -0.21
BEST3-211ENST00000552295 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
BEST3-211ENST00000552295 BHMG1C9JSJ3 638 aaPredicted RBP13.7□□□□□ -0.22
BEST3-211ENST00000552295 PTPN5P54829 565 aa13.7□□□□□ -0.22
BEST3-211ENST00000552295 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
BEST3-211ENST00000552295 MRPL50Q8N5N7 158 aaKnown RBP13.69□□□□□ -0.22
BEST3-211ENST00000552295 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
BEST3-211ENST00000552295 PCDHGA10Q9Y5H3 936 aa13.67□□□□□ -0.22
BEST3-211ENST00000552295 CEP164Q9UPV0 1460 aa13.66□□□□□ -0.22
BEST3-211ENST00000552295 THSD4Q6ZMP0 1018 aa13.65□□□□□ -0.22
BEST3-211ENST00000552295 PPP1R3GB7ZBB8 358 aa13.64□□□□□ -0.23
BEST3-211ENST00000552295 PHF14O94880 888 aa13.64□□□□□ -0.23
BEST3-211ENST00000552295 TYW1BQ6NUM6 668 aa13.64□□□□□ -0.23
BEST3-211ENST00000552295 WNT2BQ93097 391 aa13.64□□□□□ -0.23
BEST3-211ENST00000552295 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
BEST3-211ENST00000552295 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
BEST3-211ENST00000552295 SYNJ1O43426 1573 aa13.62□□□□□ -0.23
BEST3-211ENST00000552295 CAMK2BQ13554 666 aa13.62□□□□□ -0.23
BEST3-211ENST00000552295 BBXQ8WY36 941 aaPredicted RBP13.62□□□□□ -0.23
BEST3-211ENST00000552295 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
BEST3-211ENST00000552295 CUX1P39880 1505 aa13.61□□□□□ -0.23
BEST3-211ENST00000552295 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
BEST3-211ENST00000552295 ERCC6Q03468 1493 aa13.59□□□□□ -0.23
BEST3-211ENST00000552295 DNMBPQ6XZF7 1577 aa13.58□□□□□ -0.23
BEST3-211ENST00000552295 DPYSL4O14531 572 aa13.58□□□□□ -0.24
BEST3-211ENST00000552295 COL9A1P20849 921 aa13.58□□□□□ -0.24
BEST3-211ENST00000552295 RABGEF1Q9UJ41 708 aa13.58□□□□□ -0.24
BEST3-211ENST00000552295 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
BEST3-211ENST00000552295 PROX2Q3B8N5 592 aa13.57□□□□□ -0.24
BEST3-211ENST00000552295 EPAS1Q99814 870 aa13.57□□□□□ -0.24
BEST3-211ENST00000552295 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
BEST3-211ENST00000552295 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
BEST3-211ENST00000552295 TOPBP1Q92547 1522 aa13.55□□□□□ -0.24
BEST3-211ENST00000552295 WDR62O43379 1518 aa13.53□□□□□ -0.24
BEST3-211ENST00000552295 ANKK1Q8NFD2 765 aa13.52□□□□□ -0.25
BEST3-211ENST00000552295 IFFO2Q5TF58 517 aa13.51□□□□□ -0.25
BEST3-211ENST00000552295 C6orf132Q5T0Z8 1188 aa13.5□□□□□ -0.25
BEST3-211ENST00000552295 LAPTM4BQ86VI4 370 aa13.49□□□□□ -0.25
BEST3-211ENST00000552295 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
BEST3-211ENST00000552295 ONECUT3O60422 494 aaPredicted RBP13.48□□□□□ -0.25
BEST3-211ENST00000552295 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
BEST3-211ENST00000552295 DDX12PQ92771 950 aa13.48□□□□□ -0.25
BEST3-211ENST00000552295 KIAA1468Q9P260 1216 aa13.48□□□□□ -0.25
BEST3-211ENST00000552295 RBM33Q96EV2 1170 aaKnown RBP13.47□□□□□ -0.25
BEST3-211ENST00000552295 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.47□□□□□ -0.25
BEST3-211ENST00000552295 POLA1P09884 1462 aaPredicted RBP13.46□□□□□ -0.25
BEST3-211ENST00000552295 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
BEST3-211ENST00000552295 RGS20O76081 388 aa13.43□□□□□ -0.26
BEST3-211ENST00000552295 BCAMP50895 628 aa13.43□□□□□ -0.26
BEST3-211ENST00000552295 A0A0G2JS52 829 aa13.42□□□□□ -0.26
BEST3-211ENST00000552295 ZFRQ96KR1 1074 aaKnown RBP13.42□□□□□ -0.26
BEST3-211ENST00000552295 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
BEST3-211ENST00000552295 SOWAHBA6NEL2 793 aa13.41□□□□□ -0.26
BEST3-211ENST00000552295 NBR1Q14596 966 aa13.41□□□□□ -0.26
BEST3-211ENST00000552295 PDIA6Q15084 440 aa13.41□□□□□ -0.26
BEST3-211ENST00000552295 SEPT9Q9UHD8 586 aaPredicted RBP13.41□□□□□ -0.26
BEST3-211ENST00000552295 CUX2O14529 1486 aa13.41□□□□□ -0.26
BEST3-211ENST00000552295 TARBP1Q13395 1621 aaKnown RBP13.4□□□□□ -0.26
BEST3-211ENST00000552295 SPDYE16A6NNV3 312 aaPredicted RBP13.4□□□□□ -0.26
BEST3-211ENST00000552295 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
BEST3-211ENST00000552295 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.26
BEST3-211ENST00000552295 SOGA1O94964 1423 aa13.39□□□□□ -0.27
BEST3-211ENST00000552295 MAP3K7O43318 606 aa13.38□□□□□ -0.27
BEST3-211ENST00000552295 EN1Q05925 392 aaPredicted RBP13.38□□□□□ -0.27
BEST3-211ENST00000552295 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
BEST3-211ENST00000552295 FAM98CQ17RN3 349 aaKnown RBP13.37□□□□□ -0.27
BEST3-211ENST00000552295 NYAP1Q6ZVC0 841 aa13.37□□□□□ -0.27
BEST3-211ENST00000552295 E2F4Q16254 413 aa13.36□□□□□ -0.27
BEST3-211ENST00000552295 IFT140Q96RY7 1462 aa13.35□□□□□ -0.27
BEST3-211ENST00000552295 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
BEST3-211ENST00000552295 ITGBL1O95965 494 aaPredicted RBP13.34□□□□□ -0.27
BEST3-211ENST00000552295 TSR1Q2NL82 804 aaKnown RBP13.34□□□□□ -0.27
BEST3-211ENST00000552295 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
BEST3-211ENST00000552295 WDR70Q9NW82 654 aa13.34□□□□□ -0.27
BEST3-211ENST00000552295 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
BEST3-211ENST00000552295 PACS2Q86VP3 889 aa13.33□□□□□ -0.28
BEST3-211ENST00000552295 WBP1LQ9NX94 342 aa13.33□□□□□ -0.28
BEST3-211ENST00000552295 ABCA5Q8WWZ7 1642 aa13.32□□□□□ -0.28
BEST3-211ENST00000552295 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.32□□□□□ -0.28
BEST3-211ENST00000552295 EEA1Q15075 1411 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms