RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 MYBBP1AQ9BQG0 1328 aaKnown RBP31.84■■■□□ 2.69
NPAS3-211ENST00000551634 E9PCH4 1651 aa31.83■■■□□ 2.69
NPAS3-211ENST00000551634 ST20-MTHFSA0A0A6YYL1 179 aa31.82■■■□□ 2.68
NPAS3-211ENST00000551634 CCDC136Q96JN2 1154 aa31.82■■■□□ 2.68
NPAS3-211ENST00000551634 CNGB1Q14028 1251 aaPredicted RBP31.81■■■□□ 2.68
NPAS3-211ENST00000551634 DCAF11Q8TEB1 546 aa31.77■■■□□ 2.68
NPAS3-211ENST00000551634 KDM2AQ9Y2K7 1162 aa31.75■■■□□ 2.67
NPAS3-211ENST00000551634 RSPH4AQ5TD94 716 aa31.74■■■□□ 2.67
NPAS3-211ENST00000551634 CCDC141Q6ZP82 1450 aa31.73■■■□□ 2.67
NPAS3-211ENST00000551634 FAM135AQ9P2D6 1515 aa31.72■■■□□ 2.67
NPAS3-211ENST00000551634 HNRNPMP52272 730 aaKnown RBP eCLIP31.7■■■□□ 2.67
NPAS3-211ENST00000551634 TRPM1Q7Z4N2 1603 aa31.69■■■□□ 2.66
NPAS3-211ENST00000551634 NOP58Q9Y2X3 529 aaKnown RBP31.68■■■□□ 2.66
NPAS3-211ENST00000551634 PRAG1Q86YV5 1406 aa31.68■■■□□ 2.66
NPAS3-211ENST00000551634 SAMD9LQ8IVG5 1584 aa31.66■■■□□ 2.66
NPAS3-211ENST00000551634 PREX2Q70Z35 1606 aa31.66■■■□□ 2.66
NPAS3-211ENST00000551634 PARD3Q8TEW0 1356 aa31.66■■■□□ 2.66
NPAS3-211ENST00000551634 NLRP13Q86W25 1043 aa31.66■■■□□ 2.66
NPAS3-211ENST00000551634 CCDC144AA2RUR9 1427 aa31.64■■■□□ 2.66
NPAS3-211ENST00000551634 PDE3BQ13370 1112 aa31.64■■■□□ 2.66
NPAS3-211ENST00000551634 GPRASP1Q5JY77 1395 aa31.64■■■□□ 2.66
NPAS3-211ENST00000551634 CDC42BPBQ9Y5S2 1711 aa31.63■■■□□ 2.65
NPAS3-211ENST00000551634 LAMC1P11047 1609 aa31.62■■■□□ 2.65
NPAS3-211ENST00000551634 WASHC2CQ9Y4E1 1318 aa31.61■■■□□ 2.65
NPAS3-211ENST00000551634 MAST1Q9Y2H9 1570 aa31.6■■■□□ 2.65
NPAS3-211ENST00000551634 RRP1P56182 461 aaKnown RBP31.6■■■□□ 2.65
NPAS3-211ENST00000551634 UNC13BO14795 1591 aa31.6■■■□□ 2.65
NPAS3-211ENST00000551634 INSRP06213 1382 aa31.59■■■□□ 2.65
NPAS3-211ENST00000551634 ANP32AP39687 249 aaKnown RBP31.57■■■□□ 2.64
NPAS3-211ENST00000551634 ZMYM4Q5VZL5 1548 aa31.56■■■□□ 2.64
NPAS3-211ENST00000551634 PER1O15534 1290 aaPredicted RBP31.55■■■□□ 2.64
NPAS3-211ENST00000551634 RCAN3Q9UKA8 241 aa31.54■■■□□ 2.64
NPAS3-211ENST00000551634 COL17A1Q9UMD9 1497 aaPredicted RBP31.54■■■□□ 2.64
NPAS3-211ENST00000551634 IPO9Q96P70 1041 aaKnown RBP31.53■■■□□ 2.64
NPAS3-211ENST00000551634 PRDM15P57071 1507 aaPredicted RBP31.53■■■□□ 2.64
NPAS3-211ENST00000551634 PLA2R1Q13018 1463 aa31.52■■■□□ 2.64
NPAS3-211ENST00000551634 SENP3-EIF4A1A0A087X0R7 540 aa31.51■■■□□ 2.64
NPAS3-211ENST00000551634 A2MP01023 1474 aa31.51■■■□□ 2.63
NPAS3-211ENST00000551634 EIF2AK4Q9P2K8 1649 aaKnown RBP31.5■■■□□ 2.63
NPAS3-211ENST00000551634 IQGAP3Q86VI3 1631 aa31.48■■■□□ 2.63
NPAS3-211ENST00000551634 SYCP2Q9BX26 1530 aa31.47■■■□□ 2.63
NPAS3-211ENST00000551634 PLXNC1O60486 1568 aa31.47■■■□□ 2.63
NPAS3-211ENST00000551634 PAK3O75914 559 aaPredicted RBP31.47■■■□□ 2.63
NPAS3-211ENST00000551634 NBPF1Q3BBV0 1214 aa31.47■■■□□ 2.63
NPAS3-211ENST00000551634 ATP10AO60312 1499 aa31.46■■■□□ 2.63
NPAS3-211ENST00000551634 TCERG1O14776 1098 aaKnown RBP31.45■■■□□ 2.62
NPAS3-211ENST00000551634 TESK2Q96S53 571 aa31.44■■■□□ 2.62
NPAS3-211ENST00000551634 PLEKHH2Q8IVE3 1493 aa31.44■■■□□ 2.62
NPAS3-211ENST00000551634 EXOC6Q8TAG9 804 aa31.44■■■□□ 2.62
NPAS3-211ENST00000551634 RGL3Q3MIN7 710 aa31.43■■■□□ 2.62
NPAS3-211ENST00000551634 BLMP54132 1417 aaPredicted RBP31.42■■■□□ 2.62
NPAS3-211ENST00000551634 ARHGAP5Q13017 1502 aa31.42■■■□□ 2.62
NPAS3-211ENST00000551634 MYO5CQ9NQX4 1742 aa31.41■■■□□ 2.62
NPAS3-211ENST00000551634 ERBINQ96RT1 1412 aa31.4■■■□□ 2.62
NPAS3-211ENST00000551634 ZBTB47Q9UFB7 747 aaPredicted RBP31.4■■■□□ 2.62
NPAS3-211ENST00000551634 DISP3Q9P2K9 1392 aa31.39■■■□□ 2.62
NPAS3-211ENST00000551634 TTC37Q6PGP7 1564 aa31.38■■■□□ 2.61
NPAS3-211ENST00000551634 MAGI2Q86UL8 1455 aa31.38■■■□□ 2.61
NPAS3-211ENST00000551634 DEKP35659 375 aaKnown RBP31.38■■■□□ 2.61
NPAS3-211ENST00000551634 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.37■■■□□ 2.61
NPAS3-211ENST00000551634 DUOX2Q9NRD8 1548 aa31.37■■■□□ 2.61
NPAS3-211ENST00000551634 TMF1P82094 1093 aa31.36■■■□□ 2.61
NPAS3-211ENST00000551634 MS4A1P11836 297 aa31.35■■■□□ 2.61
NPAS3-211ENST00000551634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.33■■■□□ 2.61
NPAS3-211ENST00000551634 PANK3Q9H999 370 aa31.33■■■□□ 2.61
NPAS3-211ENST00000551634 SALL2Q9Y467 1007 aaPredicted RBP31.33■■■□□ 2.61
NPAS3-211ENST00000551634 RNF17Q9BXT8 1623 aaKnown RBP31.32■■■□□ 2.6
NPAS3-211ENST00000551634 CC2D1BQ5T0F9 858 aaKnown RBP31.3■■■□□ 2.6
NPAS3-211ENST00000551634 CDCA7LQ96GN5 454 aa31.29■■■□□ 2.6
NPAS3-211ENST00000551634 NBR1Q14596 966 aa31.27■■■□□ 2.6
NPAS3-211ENST00000551634 SHROOM2Q13796 1616 aa31.25■■■□□ 2.59
NPAS3-211ENST00000551634 PDE4AP27815 886 aa31.25■■■□□ 2.59
NPAS3-211ENST00000551634 BACH2Q9BYV9 841 aa31.24■■■□□ 2.59
NPAS3-211ENST00000551634 ABCC2Q92887 1545 aa31.22■■■□□ 2.59
NPAS3-211ENST00000551634 OSCARQ8IYS5 282 aa31.21■■■□□ 2.59
NPAS3-211ENST00000551634 CHD1O14646 1710 aa31.19■■■□□ 2.58
NPAS3-211ENST00000551634 RTL5Q5HYW3 569 aaPredicted RBP31.18■■■□□ 2.58
NPAS3-211ENST00000551634 STAC3Q96MF2 364 aa31.18■■■□□ 2.58
NPAS3-211ENST00000551634 WDR7Q9Y4E6 1490 aa31.17■■■□□ 2.58
NPAS3-211ENST00000551634 PLCH2O75038 1416 aa31.16■■■□□ 2.58
NPAS3-211ENST00000551634 IQGAP1P46940 1657 aa31.16■■■□□ 2.58
NPAS3-211ENST00000551634 MADDQ8WXG6 1647 aa31.15■■■□□ 2.58
NPAS3-211ENST00000551634 CDCA8Q53HL2 280 aa31.13■■■□□ 2.57
NPAS3-211ENST00000551634 CRBNQ96SW2 442 aa31.12■■■□□ 2.57
NPAS3-211ENST00000551634 PLIN1O60240 522 aa31.11■■■□□ 2.57
NPAS3-211ENST00000551634 ADAMTS8Q9UP79 889 aa31.11■■■□□ 2.57
NPAS3-211ENST00000551634 KNSTRNQ9Y448 316 aa31.11■■■□□ 2.57
NPAS3-211ENST00000551634 EFCAB2Q5VUJ9 269 aa31.11■■■□□ 2.57
NPAS3-211ENST00000551634 SYNMO15061 1565 aa31.1■■■□□ 2.57
NPAS3-211ENST00000551634 SCAPERQ9BY12 1400 aa31.09■■■□□ 2.57
NPAS3-211ENST00000551634 ABCC1P33527 1531 aa31.09■■■□□ 2.57
NPAS3-211ENST00000551634 NPM2Q86SE8 214 aaKnown RBP31.09■■■□□ 2.57
NPAS3-211ENST00000551634 PPP2R1AP30153 589 aa31.08■■■□□ 2.57
NPAS3-211ENST00000551634 TRPM2O94759 1503 aa31.08■■■□□ 2.57
NPAS3-211ENST00000551634 SPHKAPQ2M3C7 1700 aa31.07■■■□□ 2.56
NPAS3-211ENST00000551634 SCAF11Q99590 1463 aaKnown RBP31.06■■■□□ 2.56
NPAS3-211ENST00000551634 AMER1Q5JTC6 1135 aaPredicted RBP31.06■■■□□ 2.56
NPAS3-211ENST00000551634 CLASP1Q7Z460 1538 aa31.06■■■□□ 2.56
NPAS3-211ENST00000551634 WDR43Q15061 677 aaKnown RBP eCLIP31.05■■■□□ 2.56
NPAS3-211ENST00000551634 NPC1L1Q9UHC9 1359 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms