RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 FANCIQ9NVI1 1328 aa17.65■□□□□ 0.42
CACNB3-219ENST00000551544 SMG6Q86US8 1419 aaKnown RBP17.65■□□□□ 0.42
CACNB3-219ENST00000551544 NUDCQ9Y266 331 aa17.65■□□□□ 0.42
CACNB3-219ENST00000551544 FAM135AQ9P2D6 1515 aa17.64■□□□□ 0.42
CACNB3-219ENST00000551544 MSH5O43196 834 aa17.64■□□□□ 0.41
CACNB3-219ENST00000551544 RSPH4AQ5TD94 716 aa17.64■□□□□ 0.41
CACNB3-219ENST00000551544 CDC42BPBQ9Y5S2 1711 aa17.63■□□□□ 0.41
CACNB3-219ENST00000551544 CCDC144AA2RUR9 1427 aa17.62■□□□□ 0.41
CACNB3-219ENST00000551544 PREX2Q70Z35 1606 aa17.61■□□□□ 0.41
CACNB3-219ENST00000551544 SYCP2Q9BX26 1530 aa17.61■□□□□ 0.41
CACNB3-219ENST00000551544 ARHGAP5Q13017 1502 aa17.6■□□□□ 0.41
CACNB3-219ENST00000551544 NBPF1Q3BBV0 1214 aa17.6■□□□□ 0.41
CACNB3-219ENST00000551544 MYBBP1AQ9BQG0 1328 aaKnown RBP17.59■□□□□ 0.41
CACNB3-219ENST00000551544 RALBP1Q15311 655 aa17.58■□□□□ 0.4
CACNB3-219ENST00000551544 PRAG1Q86YV5 1406 aa17.57■□□□□ 0.4
CACNB3-219ENST00000551544 TTC37Q6PGP7 1564 aa17.56■□□□□ 0.4
CACNB3-219ENST00000551544 BRD4O60885 1362 aaPredicted RBP17.56■□□□□ 0.4
CACNB3-219ENST00000551544 PLA2R1Q13018 1463 aa17.54■□□□□ 0.4
CACNB3-219ENST00000551544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.54■□□□□ 0.4
CACNB3-219ENST00000551544 PLEKHH2Q8IVE3 1493 aa17.54■□□□□ 0.4
CACNB3-219ENST00000551544 SALL2Q9Y467 1007 aaPredicted RBP17.54■□□□□ 0.4
CACNB3-219ENST00000551544 CCDC136Q96JN2 1154 aa17.53■□□□□ 0.4
CACNB3-219ENST00000551544 RNF123Q5XPI4 1314 aa17.53■□□□□ 0.4
CACNB3-219ENST00000551544 LRPPRCP42704 1394 aaKnown RBP17.53■□□□□ 0.4
CACNB3-219ENST00000551544 KTN1Q86UP2 1357 aaKnown RBP17.53■□□□□ 0.4
CACNB3-219ENST00000551544 CHD1O14646 1710 aa17.53■□□□□ 0.4
CACNB3-219ENST00000551544 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
CACNB3-219ENST00000551544 TRPM1Q7Z4N2 1603 aa17.51■□□□□ 0.39
CACNB3-219ENST00000551544 A2MP01023 1474 aa17.51■□□□□ 0.39
CACNB3-219ENST00000551544 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
CACNB3-219ENST00000551544 ERCC6L2Q5T890 1561 aa17.5■□□□□ 0.39
CACNB3-219ENST00000551544 UNC13BO14795 1591 aa17.49■□□□□ 0.39
CACNB3-219ENST00000551544 MAST1Q9Y2H9 1570 aa17.49■□□□□ 0.39
CACNB3-219ENST00000551544 E9PCH4 1651 aa17.49■□□□□ 0.39
CACNB3-219ENST00000551544 CC2D1BQ5T0F9 858 aaKnown RBP17.48■□□□□ 0.39
CACNB3-219ENST00000551544 PER1O15534 1290 aaPredicted RBP17.47■□□□□ 0.39
CACNB3-219ENST00000551544 GPRASP1Q5JY77 1395 aa17.47■□□□□ 0.39
CACNB3-219ENST00000551544 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
CACNB3-219ENST00000551544 DISP3Q9P2K9 1392 aa17.47■□□□□ 0.39
CACNB3-219ENST00000551544 ABCC2Q92887 1545 aa17.47■□□□□ 0.39
CACNB3-219ENST00000551544 TESK2Q96S53 571 aa17.46■□□□□ 0.39
CACNB3-219ENST00000551544 MYO5CQ9NQX4 1742 aa17.46■□□□□ 0.39
CACNB3-219ENST00000551544 PANK3Q9H999 370 aa17.45■□□□□ 0.38
CACNB3-219ENST00000551544 MYT1LQ9UL68 1186 aa17.45■□□□□ 0.38
CACNB3-219ENST00000551544 SHROOM2Q13796 1616 aa17.44■□□□□ 0.38
CACNB3-219ENST00000551544 IQGAP3Q86VI3 1631 aa17.44■□□□□ 0.38
CACNB3-219ENST00000551544 EFCAB2Q5VUJ9 269 aa17.44■□□□□ 0.38
CACNB3-219ENST00000551544 PLXNC1O60486 1568 aa17.44■□□□□ 0.38
CACNB3-219ENST00000551544 DUOX2Q9NRD8 1548 aa17.44■□□□□ 0.38
CACNB3-219ENST00000551544 COL17A1Q9UMD9 1497 aaPredicted RBP17.43■□□□□ 0.38
CACNB3-219ENST00000551544 TMF1P82094 1093 aa17.43■□□□□ 0.38
CACNB3-219ENST00000551544 ERBINQ96RT1 1412 aa17.42■□□□□ 0.38
CACNB3-219ENST00000551544 PRDM15P57071 1507 aaPredicted RBP17.41■□□□□ 0.38
CACNB3-219ENST00000551544 PLCH2O75038 1416 aa17.41■□□□□ 0.38
CACNB3-219ENST00000551544 RRP1P56182 461 aaKnown RBP17.41■□□□□ 0.38
CACNB3-219ENST00000551544 RCAN3Q9UKA8 241 aa17.41■□□□□ 0.38
CACNB3-219ENST00000551544 TRAPPC8Q9Y2L5 1435 aa17.4■□□□□ 0.38
CACNB3-219ENST00000551544 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.37
CACNB3-219ENST00000551544 EXOC6Q8TAG9 804 aa17.38■□□□□ 0.37
CACNB3-219ENST00000551544 EIF2AK4Q9P2K8 1649 aaKnown RBP17.38■□□□□ 0.37
CACNB3-219ENST00000551544 ATP10AO60312 1499 aa17.38■□□□□ 0.37
CACNB3-219ENST00000551544 WASHC2CQ9Y4E1 1318 aa17.38■□□□□ 0.37
CACNB3-219ENST00000551544 MAGI2Q86UL8 1455 aa17.37■□□□□ 0.37
CACNB3-219ENST00000551544 AFAP1Q8N556 730 aa17.37■□□□□ 0.37
CACNB3-219ENST00000551544 SPAG9O60271 1321 aaKnown RBP17.37■□□□□ 0.37
CACNB3-219ENST00000551544 LAMC1P11047 1609 aa17.37■□□□□ 0.37
CACNB3-219ENST00000551544 PDE3BQ13370 1112 aa17.36■□□□□ 0.37
CACNB3-219ENST00000551544 ZCCHC11Q5TAX3 1644 aaKnown RBP17.34■□□□□ 0.37
CACNB3-219ENST00000551544 ABCC1P33527 1531 aa17.34■□□□□ 0.37
CACNB3-219ENST00000551544 KNSTRNQ9Y448 316 aa17.31■□□□□ 0.36
CACNB3-219ENST00000551544 NOP58Q9Y2X3 529 aaKnown RBP17.3■□□□□ 0.36
CACNB3-219ENST00000551544 PLIN1O60240 522 aa17.3■□□□□ 0.36
CACNB3-219ENST00000551544 BLMP54132 1417 aaPredicted RBP17.28■□□□□ 0.36
CACNB3-219ENST00000551544 ANP32AP39687 249 aaKnown RBP17.28■□□□□ 0.36
CACNB3-219ENST00000551544 ADAMTS8Q9UP79 889 aa17.28■□□□□ 0.36
CACNB3-219ENST00000551544 UHRF1BP1LA0JNW5 1464 aa17.28■□□□□ 0.36
CACNB3-219ENST00000551544 RNF17Q9BXT8 1623 aaKnown RBP17.27■□□□□ 0.36
CACNB3-219ENST00000551544 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-219ENST00000551544 WDR7Q9Y4E6 1490 aa17.26■□□□□ 0.35
CACNB3-219ENST00000551544 MADDQ8WXG6 1647 aa17.26■□□□□ 0.35
CACNB3-219ENST00000551544 PPP2R1AP30153 589 aa17.25■□□□□ 0.35
CACNB3-219ENST00000551544 KIF3BO15066 747 aa17.25■□□□□ 0.35
CACNB3-219ENST00000551544 RTEL1-TNFRSF6BF6WH68 1400 aa17.25■□□□□ 0.35
CACNB3-219ENST00000551544 WDR43Q15061 677 aaKnown RBP eCLIP17.25■□□□□ 0.35
CACNB3-219ENST00000551544 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
CACNB3-219ENST00000551544 TRPM2O94759 1503 aa17.24■□□□□ 0.35
CACNB3-219ENST00000551544 ZFYVE16Q7Z3T8 1539 aa17.24■□□□□ 0.35
CACNB3-219ENST00000551544 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
CACNB3-219ENST00000551544 INSRP06213 1382 aa17.23■□□□□ 0.35
CACNB3-219ENST00000551544 SCAF11Q99590 1463 aaKnown RBP17.23■□□□□ 0.35
CACNB3-219ENST00000551544 AMER1Q5JTC6 1135 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-219ENST00000551544 IPO9Q96P70 1041 aaKnown RBP17.23■□□□□ 0.35
CACNB3-219ENST00000551544 KANK1Q14678 1352 aa17.23■□□□□ 0.35
CACNB3-219ENST00000551544 PTPRTO14522 1441 aa17.22■□□□□ 0.35
CACNB3-219ENST00000551544 CLTCL1P53675 1640 aa17.22■□□□□ 0.35
CACNB3-219ENST00000551544 CRBNQ96SW2 442 aa17.21■□□□□ 0.35
CACNB3-219ENST00000551544 DEKP35659 375 aaKnown RBP17.21■□□□□ 0.35
CACNB3-219ENST00000551544 ZMYM4Q5VZL5 1548 aa17.21■□□□□ 0.35
CACNB3-219ENST00000551544 IQGAP1P46940 1657 aa17.2■□□□□ 0.34
CACNB3-219ENST00000551544 TCERG1O14776 1098 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms