RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.03□□□□□ -0.64
TMTC2-202ENST00000546590 IQGAP2Q13576 1575 aa11.01□□□□□ -0.65
TMTC2-202ENST00000546590 C9orf84Q5VXU9 1444 aa11.01□□□□□ -0.65
TMTC2-202ENST00000546590 U2AF1L5P0DN76 240 aaPredicted RBP11.01□□□□□ -0.65
TMTC2-202ENST00000546590 U2AF1Q01081 240 aaKnown RBP eCLIP11.01□□□□□ -0.65
TMTC2-202ENST00000546590 MRC2Q9UBG0 1479 aa11.01□□□□□ -0.65
TMTC2-202ENST00000546590 TROQ12816 1431 aaPredicted RBP11.01□□□□□ -0.65
TMTC2-202ENST00000546590 C20orf194Q5TEA3 1177 aa11.01□□□□□ -0.65
TMTC2-202ENST00000546590 POGKQ9P215 609 aa11.01□□□□□ -0.65
TMTC2-202ENST00000546590 MAGI3Q5TCQ9 1506 aa11.01□□□□□ -0.65
TMTC2-202ENST00000546590 ZBTB7CA1YPR0 619 aa11□□□□□ -0.65
TMTC2-202ENST00000546590 KIAA1107Q9UPP5 1409 aa11□□□□□ -0.65
TMTC2-202ENST00000546590 TCERG1O14776 1098 aaKnown RBP11□□□□□ -0.65
TMTC2-202ENST00000546590 MAP3K1Q13233 1512 aa11□□□□□ -0.65
TMTC2-202ENST00000546590 PDE4AP27815 886 aa11□□□□□ -0.65
TMTC2-202ENST00000546590 ESF1Q9H501 851 aaKnown RBP10.99□□□□□ -0.65
TMTC2-202ENST00000546590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.99□□□□□ -0.65
TMTC2-202ENST00000546590 EIF5BO60841 1220 aaKnown RBP10.99□□□□□ -0.65
TMTC2-202ENST00000546590 NCOA1Q15788 1441 aa10.99□□□□□ -0.65
TMTC2-202ENST00000546590 SLKQ9H2G2 1235 aaPredicted RBP10.99□□□□□ -0.65
TMTC2-202ENST00000546590 COG6Q9Y2V7 657 aa10.99□□□□□ -0.65
TMTC2-202ENST00000546590 MIA2Q96PC5 1412 aa10.98□□□□□ -0.65
TMTC2-202ENST00000546590 GOLGA2Q08379 1002 aa10.98□□□□□ -0.65
TMTC2-202ENST00000546590 ELL2O00472 640 aaPredicted RBP10.98□□□□□ -0.65
TMTC2-202ENST00000546590 CDCA8Q53HL2 280 aa10.98□□□□□ -0.65
TMTC2-202ENST00000546590 IPO9Q96P70 1041 aaKnown RBP10.98□□□□□ -0.65
TMTC2-202ENST00000546590 CAMSAP2Q08AD1 1489 aa10.97□□□□□ -0.65
TMTC2-202ENST00000546590 KDM6BO15054 1643 aa10.97□□□□□ -0.65
TMTC2-202ENST00000546590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.65
TMTC2-202ENST00000546590 FTSJ3Q8IY81 847 aaKnown RBP10.97□□□□□ -0.65
TMTC2-202ENST00000546590 HECW1Q76N89 1606 aa10.97□□□□□ -0.65
TMTC2-202ENST00000546590 WASHC2CQ9Y4E1 1318 aa10.96□□□□□ -0.66
TMTC2-202ENST00000546590 APBB1O00213 710 aa10.96□□□□□ -0.66
TMTC2-202ENST00000546590 BCAR3O75815 825 aa10.96□□□□□ -0.66
TMTC2-202ENST00000546590 TPRNQ4KMQ1 711 aa10.96□□□□□ -0.66
TMTC2-202ENST00000546590 KIAA0586Q9BVV6 1533 aa10.96□□□□□ -0.66
TMTC2-202ENST00000546590 SLC12A5Q9H2X9 1139 aa10.95□□□□□ -0.66
TMTC2-202ENST00000546590 CUL7Q14999 1698 aa10.95□□□□□ -0.66
TMTC2-202ENST00000546590 ARID4BQ4LE39 1312 aaPredicted RBP10.95□□□□□ -0.66
TMTC2-202ENST00000546590 NUP153P49790 1475 aaKnown RBP10.95□□□□□ -0.66
TMTC2-202ENST00000546590 PANK1Q8TE04 598 aa10.95□□□□□ -0.66
TMTC2-202ENST00000546590 C14orf37Q86TY3 774 aa10.95□□□□□ -0.66
TMTC2-202ENST00000546590 UGGT2Q9NYU1 1516 aa10.94□□□□□ -0.66
TMTC2-202ENST00000546590 MINK1Q8N4C8 1332 aaPredicted RBP10.94□□□□□ -0.66
TMTC2-202ENST00000546590 HSP90AA1P07900 732 aaKnown RBP10.94□□□□□ -0.66
TMTC2-202ENST00000546590 RPRD2Q5VT52 1461 aaKnown RBP10.94□□□□□ -0.66
TMTC2-202ENST00000546590 ARHGAP5Q13017 1502 aa10.94□□□□□ -0.66
TMTC2-202ENST00000546590 LAMC3Q9Y6N6 1575 aa10.94□□□□□ -0.66
TMTC2-202ENST00000546590 GRIN2AQ12879 1464 aa10.94□□□□□ -0.66
TMTC2-202ENST00000546590 CFAP53Q96M91 514 aa10.93□□□□□ -0.66
TMTC2-202ENST00000546590 PPP2R1AP30153 589 aa10.93□□□□□ -0.66
TMTC2-202ENST00000546590 KANK1Q14678 1352 aa10.93□□□□□ -0.66
TMTC2-202ENST00000546590 IFT140Q96RY7 1462 aa10.93□□□□□ -0.66
TMTC2-202ENST00000546590 ERICH6BQ5W0A0 696 aa10.93□□□□□ -0.66
TMTC2-202ENST00000546590 CYB5RLQ6IPT4 315 aa10.93□□□□□ -0.66
TMTC2-202ENST00000546590 CABP2Q9NPB3 220 aa10.93□□□□□ -0.66
TMTC2-202ENST00000546590 UPF2Q9HAU5 1272 aaKnown RBP10.92□□□□□ -0.66
TMTC2-202ENST00000546590 FANCIQ9NVI1 1328 aa10.92□□□□□ -0.66
TMTC2-202ENST00000546590 GPATCH8Q9UKJ3 1502 aaKnown RBP10.92□□□□□ -0.66
TMTC2-202ENST00000546590 MAPK8IP3Q9UPT6 1336 aa10.92□□□□□ -0.66
TMTC2-202ENST00000546590 PRKCSHP14314 528 aaPredicted RBP10.92□□□□□ -0.66
TMTC2-202ENST00000546590 GGNBP2Q9H3C7 697 aa10.92□□□□□ -0.66
TMTC2-202ENST00000546590 RAPGEF3O95398 923 aa10.91□□□□□ -0.66
TMTC2-202ENST00000546590 DISP3Q9P2K9 1392 aa10.91□□□□□ -0.66
TMTC2-202ENST00000546590 CFAP43Q8NDM7 1665 aa10.9□□□□□ -0.66
TMTC2-202ENST00000546590 RSPH4AQ5TD94 716 aa10.9□□□□□ -0.66
TMTC2-202ENST00000546590 KIF21AQ7Z4S6 1674 aa10.9□□□□□ -0.66
TMTC2-202ENST00000546590 SCAPERQ9BY12 1400 aa10.9□□□□□ -0.67
TMTC2-202ENST00000546590 GZF1Q9H116 711 aaPredicted RBP10.89□□□□□ -0.67
TMTC2-202ENST00000546590 FBLN1P23142 703 aa10.89□□□□□ -0.67
TMTC2-202ENST00000546590 ITPRIPQ8IWB1 547 aa10.89□□□□□ -0.67
TMTC2-202ENST00000546590 PLEKHH2Q8IVE3 1493 aa10.89□□□□□ -0.67
TMTC2-202ENST00000546590 ROCK1Q13464 1354 aa10.88□□□□□ -0.67
TMTC2-202ENST00000546590 CTTNBP2Q8WZ74 1663 aa10.88□□□□□ -0.67
TMTC2-202ENST00000546590 MAGI1Q96QZ7 1491 aaPredicted RBP10.88□□□□□ -0.67
TMTC2-202ENST00000546590 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
TMTC2-202ENST00000546590 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.88□□□□□ -0.67
TMTC2-202ENST00000546590 SYNJ2O15056 1496 aa10.88□□□□□ -0.67
TMTC2-202ENST00000546590 CENPJQ9HC77 1338 aaPredicted RBP10.87□□□□□ -0.67
TMTC2-202ENST00000546590 MTHFSP49914 203 aa10.87□□□□□ -0.67
TMTC2-202ENST00000546590 TSR2Q969E8 191 aaKnown RBP10.87□□□□□ -0.67
TMTC2-202ENST00000546590 SMC4Q9NTJ3 1288 aa10.87□□□□□ -0.67
TMTC2-202ENST00000546590 BRD4O60885 1362 aaPredicted RBP10.86□□□□□ -0.67
TMTC2-202ENST00000546590 ADGRF5Q8IZF2 1346 aa10.86□□□□□ -0.67
TMTC2-202ENST00000546590 ATP10BO94823 1461 aa10.86□□□□□ -0.67
TMTC2-202ENST00000546590 PDE3BQ13370 1112 aa10.86□□□□□ -0.67
TMTC2-202ENST00000546590 MFAP1P55081 439 aaKnown RBP10.85□□□□□ -0.67
TMTC2-202ENST00000546590 HMOX1P09601 288 aa10.85□□□□□ -0.67
TMTC2-202ENST00000546590 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
TMTC2-202ENST00000546590 SMG6Q86US8 1419 aaKnown RBP10.84□□□□□ -0.67
TMTC2-202ENST00000546590 DHX29Q7Z478 1369 aaKnown RBP10.84□□□□□ -0.67
TMTC2-202ENST00000546590 DISP1Q96F81 1524 aa10.84□□□□□ -0.67
TMTC2-202ENST00000546590 PZPP20742 1482 aa10.84□□□□□ -0.67
TMTC2-202ENST00000546590 TCP11L2Q8N4U5 519 aa10.84□□□□□ -0.67
TMTC2-202ENST00000546590 LMOD2Q6P5Q4 547 aa10.83□□□□□ -0.68
TMTC2-202ENST00000546590 ERBINQ96RT1 1412 aa10.83□□□□□ -0.68
TMTC2-202ENST00000546590 WDR62O43379 1518 aa10.82□□□□□ -0.68
TMTC2-202ENST00000546590 SPINK5Q9NQ38 1064 aaPredicted RBP10.82□□□□□ -0.68
TMTC2-202ENST00000546590 TNNQ9UQP3 1299 aa10.82□□□□□ -0.68
TMTC2-202ENST00000546590 DENND4BO75064 1496 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms