RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 CCDC146Q8IYE0 955 aa24.84■■□□□ 1.57
BPTF-208ENST00000544778 PCMTD1Q96MG8 357 aaPredicted RBP24.84■■□□□ 1.57
BPTF-208ENST00000544778 KIF27Q86VH2 1401 aa24.83■■□□□ 1.57
BPTF-208ENST00000544778 FAM184AQ8NB25 1140 aa24.83■■□□□ 1.57
BPTF-208ENST00000544778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.83■■□□□ 1.56
BPTF-208ENST00000544778 FOXD4L6Q3SYB3 417 aaPredicted RBP24.82■■□□□ 1.56
BPTF-208ENST00000544778 FOXD4L3Q6VB84 417 aaPredicted RBP24.82■■□□□ 1.56
BPTF-208ENST00000544778 RILPL2Q969X0 211 aa24.82■■□□□ 1.56
BPTF-208ENST00000544778 EID1Q9Y6B2 187 aa24.82■■□□□ 1.56
BPTF-208ENST00000544778 NOL10Q9BSC4 688 aaKnown RBP24.82■■□□□ 1.56
BPTF-208ENST00000544778 KIF3AQ9Y496 699 aa24.81■■□□□ 1.56
BPTF-208ENST00000544778 CLUAP1Q96AJ1 413 aa24.81■■□□□ 1.56
BPTF-208ENST00000544778 TCERG1O14776 1098 aaKnown RBP24.8■■□□□ 1.56
BPTF-208ENST00000544778 KLHL34Q8N239 644 aa24.8■■□□□ 1.56
BPTF-208ENST00000544778 AMOTL1Q8IY63 956 aa24.79■■□□□ 1.56
BPTF-208ENST00000544778 NGEFQ8N5V2 710 aa24.79■■□□□ 1.56
BPTF-208ENST00000544778 HSPA5P11021 654 aaKnown RBP24.79■■□□□ 1.56
BPTF-208ENST00000544778 ST18O60284 1047 aa24.79■■□□□ 1.56
BPTF-208ENST00000544778 TPM1P09493 284 aa24.78■■□□□ 1.56
BPTF-208ENST00000544778 GOLGA6L19H0YKK7 550 aa24.77■■□□□ 1.56
BPTF-208ENST00000544778 MCTP1Q6DN14 999 aa24.77■■□□□ 1.56
BPTF-208ENST00000544778 CCDC70Q6NSX1 233 aa24.77■■□□□ 1.56
BPTF-208ENST00000544778 MEX3CQ5U5Q3 659 aaKnown RBP24.76■■□□□ 1.55
BPTF-208ENST00000544778 SYNE3Q6ZMZ3 975 aa24.76■■□□□ 1.55
BPTF-208ENST00000544778 SAMD1Q6SPF0 538 aaPredicted RBP24.76■■□□□ 1.55
BPTF-208ENST00000544778 PKD2Q13563 968 aa24.76■■□□□ 1.55
BPTF-208ENST00000544778 DHX16O60231 1041 aaKnown RBP24.74■■□□□ 1.55
BPTF-208ENST00000544778 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.74■■□□□ 1.551e-6■■■■■ 61.4
BPTF-208ENST00000544778 RBM19Q9Y4C8 960 aaKnown RBP24.74■■□□□ 1.55
BPTF-208ENST00000544778 TERF2IPQ9NYB0 399 aa24.73■■□□□ 1.55
BPTF-208ENST00000544778 C1orf141Q5JVX7 400 aa24.71■■□□□ 1.55
BPTF-208ENST00000544778 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.71■■□□□ 1.55
BPTF-208ENST00000544778 EIF3AQ14152 1382 aaKnown RBP24.71■■□□□ 1.55
BPTF-208ENST00000544778 VPS37DQ86XT2 251 aa24.7■■□□□ 1.54
BPTF-208ENST00000544778 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.54
BPTF-208ENST00000544778 BECN2A8MW95 431 aa24.69■■□□□ 1.54
BPTF-208ENST00000544778 APPP05067 770 aa24.69■■□□□ 1.54
BPTF-208ENST00000544778 ZNF592Q92610 1267 aa24.69■■□□□ 1.54
BPTF-208ENST00000544778 LMOD3Q0VAK6 560 aa24.68■■□□□ 1.54
BPTF-208ENST00000544778 CCDC43Q96MW1 224 aaKnown RBP24.68■■□□□ 1.54
BPTF-208ENST00000544778 SYTL4Q96C24 671 aaPredicted RBP24.68■■□□□ 1.54
BPTF-208ENST00000544778 TRIM29Q14134 588 aa24.68■■□□□ 1.54
BPTF-208ENST00000544778 RRP12Q5JTH9 1297 aaKnown RBP24.66■■□□□ 1.54
BPTF-208ENST00000544778 WRNQ14191 1432 aaPredicted RBP eCLIP24.65■■□□□ 1.54
BPTF-208ENST00000544778 CCDC180Q9P1Z9 1646 aa24.65■■□□□ 1.54
BPTF-208ENST00000544778 EEA1Q15075 1411 aa24.65■■□□□ 1.54
BPTF-208ENST00000544778 CEP164Q9UPV0 1460 aa24.65■■□□□ 1.54
BPTF-208ENST00000544778 PHF23Q9BUL5 403 aaPredicted RBP24.65■■□□□ 1.54
BPTF-208ENST00000544778 RALBP1Q15311 655 aa24.64■■□□□ 1.54
BPTF-208ENST00000544778 CENPJQ9HC77 1338 aaPredicted RBP24.64■■□□□ 1.53
BPTF-208ENST00000544778 GPS2Q13227 327 aa24.63■■□□□ 1.53
BPTF-208ENST00000544778 CCDC47Q96A33 483 aaKnown RBP24.62■■□□□ 1.53
BPTF-208ENST00000544778 ANKRD45Q5TZF3 282 aa24.61■■□□□ 1.53
BPTF-208ENST00000544778 RRP7AQ9Y3A4 280 aaKnown RBP24.61■■□□□ 1.53
BPTF-208ENST00000544778 FHAD1B1AJZ9 1412 aa24.6■■□□□ 1.53
BPTF-208ENST00000544778 ODF2Q5BJF6 829 aa24.6■■□□□ 1.53
BPTF-208ENST00000544778 IPO7O95373 1038 aaKnown RBP24.59■■□□□ 1.53
BPTF-208ENST00000544778 ELL2O00472 640 aaPredicted RBP24.59■■□□□ 1.53
BPTF-208ENST00000544778 NAP1L1P55209 391 aaKnown RBP24.59■■□□□ 1.53
BPTF-208ENST00000544778 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
BPTF-208ENST00000544778 CCER2I3L3R5 266 aa24.58■■□□□ 1.53
BPTF-208ENST00000544778 CT47A1Q5JQC4 288 aaPredicted RBP24.58■■□□□ 1.53
BPTF-208ENST00000544778 TTC5Q8N0Z6 440 aa24.58■■□□□ 1.53
BPTF-208ENST00000544778 EIF2S2P20042 333 aaKnown RBP24.58■■□□□ 1.53
BPTF-208ENST00000544778 CALRP27797 417 aaKnown RBP24.58■■□□□ 1.53
BPTF-208ENST00000544778 LRRFIP1Q32MZ4 808 aaKnown RBP24.57■■□□□ 1.52
BPTF-208ENST00000544778 ANKRD20A12PQ8NF67 263 aa24.57■■□□□ 1.52
BPTF-208ENST00000544778 ARHGAP35Q9NRY4 1499 aa24.57■■□□□ 1.52
BPTF-208ENST00000544778 NFXL1Q6ZNB6 911 aa24.57■■□□□ 1.52
BPTF-208ENST00000544778 NECTIN2Q92692 538 aa24.57■■□□□ 1.52
BPTF-208ENST00000544778 DIAPH3Q9NSV4 1193 aa24.56■■□□□ 1.52
BPTF-208ENST00000544778 KIF3BO15066 747 aa24.56■■□□□ 1.52
BPTF-208ENST00000544778 AEBP2Q6ZN18 517 aaPredicted RBP24.55■■□□□ 1.52
BPTF-208ENST00000544778 C9orf78Q9NZ63 289 aaPredicted RBP24.55■■□□□ 1.52
BPTF-208ENST00000544778 FOSBP53539 338 aa24.55■■□□□ 1.52
BPTF-208ENST00000544778 CPLX2Q6PUV4 134 aaKnown RBP24.55■■□□□ 1.52
BPTF-208ENST00000544778 CHMP4CQ96CF2 233 aa24.55■■□□□ 1.52
BPTF-208ENST00000544778 DDX11L8A8MPP1 907 aa24.54■■□□□ 1.52
BPTF-208ENST00000544778 NUP155O75694 1391 aa24.54■■□□□ 1.52
BPTF-208ENST00000544778 ANO2Q9NQ90 1003 aa24.54■■□□□ 1.52
BPTF-208ENST00000544778 ZNF771Q7L3S4 317 aaPredicted RBP24.54■■□□□ 1.52
BPTF-208ENST00000544778 NEXNQ0ZGT2 675 aa24.53■■□□□ 1.52
BPTF-208ENST00000544778 ZFYVE27Q5T4F4 411 aa24.53■■□□□ 1.52
BPTF-208ENST00000544778 WASHC2CQ9Y4E1 1318 aa24.53■■□□□ 1.52
BPTF-208ENST00000544778 ATP6V1DQ9Y5K8 247 aa24.53■■□□□ 1.52
BPTF-208ENST00000544778 DDX49Q9Y6V7 483 aaKnown RBP24.52■■□□□ 1.52
BPTF-208ENST00000544778 ERICH2A1L162 156 aa24.52■■□□□ 1.52
BPTF-208ENST00000544778 CPLX1O14810 134 aa24.52■■□□□ 1.52
BPTF-208ENST00000544778 R3HCC1Q9Y3T6 440 aaKnown RBP24.52■■□□□ 1.52
BPTF-208ENST00000544778 FYB1O15117 783 aa24.51■■□□□ 1.51
BPTF-208ENST00000544778 TEFQ10587 303 aa24.51■■□□□ 1.51
BPTF-208ENST00000544778 HOOK1Q9UJC3 728 aaKnown RBP24.51■■□□□ 1.51
BPTF-208ENST00000544778 HOMER1Q86YM7 354 aa24.51■■□□□ 1.51
BPTF-208ENST00000544778 TRAK1Q9UPV9 953 aa24.51■■□□□ 1.51
BPTF-208ENST00000544778 SETD5Q9C0A6 1442 aa24.5■■□□□ 1.51
BPTF-208ENST00000544778 BCL2L13Q9BXK5 485 aa24.5■■□□□ 1.51
BPTF-208ENST00000544778 TRDNQ13061 729 aa24.49■■□□□ 1.51
BPTF-208ENST00000544778 DCAF8L1A6NGE4 600 aa24.48■■□□□ 1.51
BPTF-208ENST00000544778 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.48■■□□□ 1.51
BPTF-208ENST00000544778 RBM33Q96EV2 1170 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms