RNA–Protein interactions for RNA: ENST00000544154.1

NPIPB3-213, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-213ENST00000544154 TBC1D12O60347 775 aa6.03□□□□□ -1.44
NPIPB3-213ENST00000544154 EMID1Q96A84 441 aaPredicted RBP6.03□□□□□ -1.44
NPIPB3-213ENST00000544154 ADAM33Q9BZ11 813 aa6.03□□□□□ -1.44
NPIPB3-213ENST00000544154 TSR3Q9UJK0 312 aaKnown RBP6.03□□□□□ -1.44
NPIPB3-213ENST00000544154 PLPP6Q8IY26 295 aa6.02□□□□□ -1.45
NPIPB3-213ENST00000544154 HPS5Q9UPZ3 1129 aa6.02□□□□□ -1.45
NPIPB3-213ENST00000544154 FOXK1P85037 733 aa6.01□□□□□ -1.45
NPIPB3-213ENST00000544154 PRR20EP86478 221 aa6.01□□□□□ -1.45
NPIPB3-213ENST00000544154 PRR20CP86479 221 aa6.01□□□□□ -1.45
NPIPB3-213ENST00000544154 PRR20DP86480 221 aa6.01□□□□□ -1.45
NPIPB3-213ENST00000544154 PRR20BP86481 221 aa6.01□□□□□ -1.45
NPIPB3-213ENST00000544154 PRR20AP86496 221 aa6.01□□□□□ -1.45
NPIPB3-213ENST00000544154 FAM181BA6NEQ2 426 aa6□□□□□ -1.45
NPIPB3-213ENST00000544154 ZNF516Q92618 1163 aa5.99□□□□□ -1.45
NPIPB3-213ENST00000544154 RNF25Q96BH1 459 aaPredicted RBP5.99□□□□□ -1.45
NPIPB3-213ENST00000544154 FAM187AA6NFU0 413 aa5.98□□□□□ -1.45
NPIPB3-213ENST00000544154 MTRQ99707 1265 aa5.98□□□□□ -1.45
NPIPB3-213ENST00000544154 GMPR2Q9P2T1 348 aaKnown RBP5.98□□□□□ -1.45
NPIPB3-213ENST00000544154 COL9A1P20849 921 aa5.97□□□□□ -1.45
NPIPB3-213ENST00000544154 VASPP50552 380 aaPredicted RBP5.97□□□□□ -1.45
NPIPB3-213ENST00000544154 KCTD17Q8N5Z5 321 aa5.97□□□□□ -1.45
NPIPB3-213ENST00000544154 NKX2-3Q8TAU0 364 aa5.97□□□□□ -1.45
NPIPB3-213ENST00000544154 OXER1Q8TDS5 423 aa5.97□□□□□ -1.45
NPIPB3-213ENST00000544154 PPP1R3GB7ZBB8 358 aa5.96□□□□□ -1.46
NPIPB3-213ENST00000544154 TERTO14746 1132 aaKnown RBP5.96□□□□□ -1.46
NPIPB3-213ENST00000544154 GSK3AP49840 483 aa5.96□□□□□ -1.46
NPIPB3-213ENST00000544154 IL21Q9HBE4 155 aa5.96□□□□□ -1.46
NPIPB3-213ENST00000544154 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.96□□□□□ -1.46
NPIPB3-213ENST00000544154 KIAA1468Q9P260 1216 aa5.96□□□□□ -1.46
NPIPB3-213ENST00000544154 C11orf95C9JLR9 678 aaPredicted RBP5.95□□□□□ -1.46
NPIPB3-213ENST00000544154 ZDHHC16Q969W1 377 aa5.95□□□□□ -1.46
NPIPB3-213ENST00000544154 RIOK3O14730 519 aaKnown RBP5.94□□□□□ -1.46
NPIPB3-213ENST00000544154 GDF9O60383 454 aa5.94□□□□□ -1.46
NPIPB3-213ENST00000544154 DSG2Q14126 1118 aa5.94□□□□□ -1.46
NPIPB3-213ENST00000544154 ZSCAN1Q8NBB4 408 aa5.94□□□□□ -1.46
NPIPB3-213ENST00000544154 JPH4Q96JJ6 628 aa5.94□□□□□ -1.46
NPIPB3-213ENST00000544154 SEPT9Q9UHD8 586 aaPredicted RBP5.94□□□□□ -1.46
NPIPB3-213ENST00000544154 CRIPAKQ8N1N5 446 aa5.93□□□□□ -1.46
NPIPB3-213ENST00000544154 SPOCK2Q92563 424 aa5.93□□□□□ -1.46
NPIPB3-213ENST00000544154 PSMG3-AS1Q96PY0 264 aa5.93□□□□□ -1.46
NPIPB3-213ENST00000544154 ANO8Q9HCE9 1232 aaPredicted RBP5.93□□□□□ -1.46
NPIPB3-213ENST00000544154 FBXO3Q9UK99 471 aa5.93□□□□□ -1.46
NPIPB3-213ENST00000544154 VGFO15240 615 aaPredicted RBP5.92□□□□□ -1.46
NPIPB3-213ENST00000544154 SLC19A1P41440 591 aa5.92□□□□□ -1.46
NPIPB3-213ENST00000544154 SPRYD7Q5W111 196 aa5.92□□□□□ -1.46
NPIPB3-213ENST00000544154 LRCH3Q96II8 777 aa5.92□□□□□ -1.46
NPIPB3-213ENST00000544154 ZNF598Q86UK7 904 aaKnown RBP5.91□□□□□ -1.46
NPIPB3-213ENST00000544154 TMUB1Q9BVT8 246 aa5.9□□□□□ -1.46
NPIPB3-213ENST00000544154 TNFRSF10AO00220 468 aa5.89□□□□□ -1.47
NPIPB3-213ENST00000544154 PPP1R37O75864 691 aa5.89□□□□□ -1.47
NPIPB3-213ENST00000544154 FAM98CQ17RN3 349 aaKnown RBP5.89□□□□□ -1.47
NPIPB3-213ENST00000544154 TRIM41Q8WV44 630 aa5.89□□□□□ -1.47
NPIPB3-213ENST00000544154 GPHNQ9NQX3 736 aaPredicted RBP5.89□□□□□ -1.47
NPIPB3-213ENST00000544154 ONECUT3O60422 494 aaPredicted RBP5.88□□□□□ -1.47
NPIPB3-213ENST00000544154 PPP4CP60510 307 aa5.88□□□□□ -1.47
NPIPB3-213ENST00000544154 KCNMA1Q12791 1236 aa5.87□□□□□ -1.47
NPIPB3-213ENST00000544154 UPF1Q92900 1129 aaKnown RBP eCLIP5.87□□□□□ -1.47
NPIPB3-213ENST00000544154 GMPRP36959 345 aa5.86□□□□□ -1.47
NPIPB3-213ENST00000544154 BCL11BQ9C0K0 894 aaPredicted RBP5.86□□□□□ -1.47
NPIPB3-213ENST00000544154 AVPP01185 164 aa5.85□□□□□ -1.47
NPIPB3-213ENST00000544154 SNRPBP14678 240 aaKnown RBP5.85□□□□□ -1.47
NPIPB3-213ENST00000544154 GGCXP38435 758 aa5.85□□□□□ -1.47
NPIPB3-213ENST00000544154 IFNLR1Q8IU57 520 aaPredicted RBP5.85□□□□□ -1.47
NPIPB3-213ENST00000544154 ZNF697Q5TEC3 545 aa5.84□□□□□ -1.47
NPIPB3-213ENST00000544154 RNF223E7ERA6 249 aa5.83□□□□□ -1.48
NPIPB3-213ENST00000544154 LIAT1Q6ZQX7 453 aa5.83□□□□□ -1.48
NPIPB3-213ENST00000544154 KRTAP9-9Q9BYP9 154 aa5.83□□□□□ -1.48
NPIPB3-213ENST00000544154 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
NPIPB3-213ENST00000544154 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
NPIPB3-213ENST00000544154 FKBP8Q14318 412 aa5.81□□□□□ -1.48
NPIPB3-213ENST00000544154 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
NPIPB3-213ENST00000544154 AXIN1O15169 862 aa5.8□□□□□ -1.48
NPIPB3-213ENST00000544154 PCDHGA10Q9Y5H3 936 aa5.8□□□□□ -1.48
NPIPB3-213ENST00000544154 TRIM6-TRIM34B2RNG4 842 aa5.79□□□□□ -1.48
NPIPB3-213ENST00000544154 SMCPP49901 116 aaPredicted RBP5.79□□□□□ -1.48
NPIPB3-213ENST00000544154 STK24Q9Y6E0 443 aa5.79□□□□□ -1.48
NPIPB3-213ENST00000544154 EVI5O60447 810 aa5.78□□□□□ -1.48
NPIPB3-213ENST00000544154 PKD2L1Q9P0L9 805 aa5.78□□□□□ -1.48
NPIPB3-213ENST00000544154 APLP1P51693 650 aa5.77□□□□□ -1.49
NPIPB3-213ENST00000544154 KRTAP4-12Q9BQ66 201 aa5.77□□□□□ -1.49
NPIPB3-213ENST00000544154 SAMD7Q7Z3H4 446 aa5.76□□□□□ -1.49
NPIPB3-213ENST00000544154 TMEM151AQ8N4L1 468 aa5.76□□□□□ -1.49
NPIPB3-213ENST00000544154 CTC1Q2NKJ3 1217 aa5.75□□□□□ -1.49
NPIPB3-213ENST00000544154 TRIM47Q96LD4 638 aa5.75□□□□□ -1.49
NPIPB3-213ENST00000544154 PPEF1O14829 653 aaPredicted RBP5.73□□□□□ -1.49
NPIPB3-213ENST00000544154 ATP13A2Q9NQ11 1180 aa5.73□□□□□ -1.49
NPIPB3-213ENST00000544154 TOR4AQ9NXH8 423 aa5.73□□□□□ -1.49
NPIPB3-213ENST00000544154 GDF11O95390 407 aa5.72□□□□□ -1.49
NPIPB3-213ENST00000544154 COPS2P61201 443 aa5.72□□□□□ -1.49
NPIPB3-213ENST00000544154 RASSF7Q02833 373 aa5.72□□□□□ -1.49
NPIPB3-213ENST00000544154 ANKLE1Q8NAG6 615 aa5.72□□□□□ -1.49
NPIPB3-213ENST00000544154 SLC16A10Q8TF71 515 aa5.72□□□□□ -1.49
NPIPB3-213ENST00000544154 ZPR1O75312 459 aa5.71□□□□□ -1.5
NPIPB3-213ENST00000544154 ERBB4Q15303 1308 aa5.7□□□□□ -1.5
NPIPB3-213ENST00000544154 PLA2G2CQ5R387 149 aa5.69□□□□□ -1.5
NPIPB3-213ENST00000544154 C6orf132Q5T0Z8 1188 aa5.69□□□□□ -1.5
NPIPB3-213ENST00000544154 IRF7Q92985 503 aa5.69□□□□□ -1.5
NPIPB3-213ENST00000544154 NXF1Q9UBU9 619 aaKnown RBP5.69□□□□□ -1.5
NPIPB3-213ENST00000544154 TSKSQ9UJT2 592 aa5.69□□□□□ -1.5
NPIPB3-213ENST00000544154 FOXC1Q12948 553 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms