RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 GAPVD1Q14C86 1478 aa23.82■■□□□ 1.4
CCT4-204ENST00000544079 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
CCT4-204ENST00000544079 TOPBP1Q92547 1522 aa23.81■■□□□ 1.4
CCT4-204ENST00000544079 CNGB1Q14028 1251 aaPredicted RBP23.8■■□□□ 1.4
CCT4-204ENST00000544079 SENP3-EIF4A1A0A087X0R7 540 aa23.79■■□□□ 1.4
CCT4-204ENST00000544079 VIRMAQ69YN4 1812 aaKnown RBP23.78■■□□□ 1.4
CCT4-204ENST00000544079 CDCA7LQ96GN5 454 aa23.74■■□□□ 1.39
CCT4-204ENST00000544079 PLIN1O60240 522 aa23.73■■□□□ 1.39
CCT4-204ENST00000544079 RRAGDQ9NQL2 400 aaPredicted RBP23.73■■□□□ 1.39
CCT4-204ENST00000544079 ADGBQ8N7X0 1667 aa23.73■■□□□ 1.39
CCT4-204ENST00000544079 SKAP1Q86WV1 359 aa23.71■■□□□ 1.39
CCT4-204ENST00000544079 CARD11Q9BXL7 1154 aa23.7■■□□□ 1.38
CCT4-204ENST00000544079 RRP9O43818 475 aaKnown RBP23.69■■□□□ 1.38
CCT4-204ENST00000544079 ADGRL2O95490 1459 aa23.67■■□□□ 1.38
CCT4-204ENST00000544079 CDK13Q14004 1512 aaKnown RBP23.66■■□□□ 1.38
CCT4-204ENST00000544079 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.65■■□□□ 1.38
CCT4-204ENST00000544079 CLCN1P35523 988 aa23.64■■□□□ 1.38
CCT4-204ENST00000544079 POGKQ9P215 609 aa23.64■■□□□ 1.38
CCT4-204ENST00000544079 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.38
CCT4-204ENST00000544079 BECN1Q14457 450 aa23.64■■□□□ 1.37
CCT4-204ENST00000544079 ZNF326Q5BKZ1 582 aaKnown RBP23.63■■□□□ 1.37
CCT4-204ENST00000544079 ST20-MTHFSA0A0A6YYL1 179 aa23.63■■□□□ 1.37
CCT4-204ENST00000544079 EIF3AQ14152 1382 aaKnown RBP23.62■■□□□ 1.37
CCT4-204ENST00000544079 C20orf194Q5TEA3 1177 aa23.62■■□□□ 1.37
CCT4-204ENST00000544079 PER1O15534 1290 aaPredicted RBP23.61■■□□□ 1.37
CCT4-204ENST00000544079 PNNQ9H307 717 aaKnown RBP23.59■■□□□ 1.37
CCT4-204ENST00000544079 ZMYND15Q9H091 742 aa23.59■■□□□ 1.37
CCT4-204ENST00000544079 HSP90AA2PQ14568 343 aaPredicted RBP23.58■■□□□ 1.37
CCT4-204ENST00000544079 USP19O94966 1318 aa23.58■■□□□ 1.37
CCT4-204ENST00000544079 CROCC2H7BZ55 1655 aa23.58■■□□□ 1.37
CCT4-204ENST00000544079 HSP90AA1P07900 732 aaKnown RBP23.58■■□□□ 1.36
CCT4-204ENST00000544079 PKD2Q13563 968 aa23.57■■□□□ 1.36
CCT4-204ENST00000544079 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
CCT4-204ENST00000544079 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
CCT4-204ENST00000544079 CEP170Q5SW79 1584 aa23.56■■□□□ 1.36
CCT4-204ENST00000544079 FSD2A1L4K1 749 aa23.56■■□□□ 1.36
CCT4-204ENST00000544079 KIAA0586Q9BVV6 1533 aa23.56■■□□□ 1.36
CCT4-204ENST00000544079 VSIG10Q8N0Z9 540 aa23.56■■□□□ 1.36
CCT4-204ENST00000544079 KDM5DQ9BY66 1539 aa23.55■■□□□ 1.36
CCT4-204ENST00000544079 IQGAP2Q13576 1575 aa23.54■■□□□ 1.36
CCT4-204ENST00000544079 LAMC1P11047 1609 aa23.53■■□□□ 1.36
CCT4-204ENST00000544079 DUSP27Q5VZP5 1158 aa23.53■■□□□ 1.36
CCT4-204ENST00000544079 NAP1L5Q96NT1 182 aaPredicted RBP23.53■■□□□ 1.36
CCT4-204ENST00000544079 ANTXR1Q9H6X2 564 aa23.53■■□□□ 1.36
CCT4-204ENST00000544079 ITSN2Q9NZM3 1697 aa23.53■■□□□ 1.36
CCT4-204ENST00000544079 GOLGA6L3A6NEY3 463 aa23.52■■□□□ 1.36
CCT4-204ENST00000544079 ZMYM3Q14202 1370 aa23.51■■□□□ 1.35
CCT4-204ENST00000544079 COL17A1Q9UMD9 1497 aaPredicted RBP23.51■■□□□ 1.35
CCT4-204ENST00000544079 MAPK8IP3Q9UPT6 1336 aa23.51■■□□□ 1.35
CCT4-204ENST00000544079 CAMSAP2Q08AD1 1489 aa23.51■■□□□ 1.35
CCT4-204ENST00000544079 TRPM1Q7Z4N2 1603 aa23.5■■□□□ 1.35
CCT4-204ENST00000544079 XRCC6P12956 609 aaKnown RBP eCLIP23.5■■□□□ 1.35
CCT4-204ENST00000544079 RGS3P49796 1198 aa23.5■■□□□ 1.35
CCT4-204ENST00000544079 ZNF521Q96K83 1311 aa23.5■■□□□ 1.35
CCT4-204ENST00000544079 NLRP1Q9C000 1473 aa23.5■■□□□ 1.35
CCT4-204ENST00000544079 CCDC144AA2RUR9 1427 aa23.48■■□□□ 1.35
CCT4-204ENST00000544079 ZNF644Q9H582 1327 aaPredicted RBP23.48■■□□□ 1.35
CCT4-204ENST00000544079 ANKRD30AQ9BXX3 1397 aa23.47■■□□□ 1.35
CCT4-204ENST00000544079 ISY1Q9ULR0 285 aaKnown RBP23.45■■□□□ 1.35
CCT4-204ENST00000544079 GPRASP1Q5JY77 1395 aa23.45■■□□□ 1.35
CCT4-204ENST00000544079 GOLGA2Q08379 1002 aa23.44■■□□□ 1.34
CCT4-204ENST00000544079 ANKRD50Q9ULJ7 1429 aa23.44■■□□□ 1.34
CCT4-204ENST00000544079 TDRD9Q8NDG6 1382 aaKnown RBP23.43■■□□□ 1.34
CCT4-204ENST00000544079 PLEKHH1Q9ULM0 1364 aa23.43■■□□□ 1.34
CCT4-204ENST00000544079 NINLQ9Y2I6 1382 aa23.42■■□□□ 1.34
CCT4-204ENST00000544079 MRE11P49959 708 aa23.42■■□□□ 1.34
CCT4-204ENST00000544079 TRMT2AQ8IZ69 625 aaKnown RBP23.42■■□□□ 1.34
CCT4-204ENST00000544079 EIF4G3O43432 1585 aaKnown RBP23.41■■□□□ 1.34
CCT4-204ENST00000544079 OSCARQ8IYS5 282 aa23.41■■□□□ 1.34
CCT4-204ENST00000544079 PRAG1Q86YV5 1406 aa23.41■■□□□ 1.34
CCT4-204ENST00000544079 CENPJQ9HC77 1338 aaPredicted RBP23.4■■□□□ 1.34
CCT4-204ENST00000544079 PRDM15P57071 1507 aaPredicted RBP23.4■■□□□ 1.34
CCT4-204ENST00000544079 SLFN5Q08AF3 891 aa23.39■■□□□ 1.34
CCT4-204ENST00000544079 PTPRGP23470 1445 aa23.39■■□□□ 1.34
CCT4-204ENST00000544079 SHANK2Q9UPX8 1470 aa23.39■■□□□ 1.33
CCT4-204ENST00000544079 SLKQ9H2G2 1235 aaPredicted RBP23.38■■□□□ 1.33
CCT4-204ENST00000544079 ADAMTS8Q9UP79 889 aa23.38■■□□□ 1.33
CCT4-204ENST00000544079 CGNL1Q0VF96 1302 aa23.38■■□□□ 1.33
CCT4-204ENST00000544079 ADCY10Q96PN6 1610 aa23.38■■□□□ 1.33
CCT4-204ENST00000544079 MCM4P33991 863 aa23.38■■□□□ 1.33
CCT4-204ENST00000544079 NKTRP30414 1462 aaKnown RBP23.36■■□□□ 1.33
CCT4-204ENST00000544079 TPM2P07951 284 aa23.36■■□□□ 1.33
CCT4-204ENST00000544079 UPF2Q9HAU5 1272 aaKnown RBP23.36■■□□□ 1.33
CCT4-204ENST00000544079 NUP153P49790 1475 aaKnown RBP23.36■■□□□ 1.33
CCT4-204ENST00000544079 CC2D1BQ5T0F9 858 aaKnown RBP23.35■■□□□ 1.33
CCT4-204ENST00000544079 NUP155O75694 1391 aa23.35■■□□□ 1.33
CCT4-204ENST00000544079 TBC1D32Q96NH3 1257 aa23.35■■□□□ 1.33
CCT4-204ENST00000544079 TROQ12816 1431 aaPredicted RBP23.35■■□□□ 1.33
CCT4-204ENST00000544079 AAMPQ13685 434 aa23.34■■□□□ 1.33
CCT4-204ENST00000544079 RAPGEF6Q8TEU7 1601 aa23.34■■□□□ 1.33
CCT4-204ENST00000544079 PDE3AQ14432 1141 aa23.34■■□□□ 1.33
CCT4-204ENST00000544079 GPATCH8Q9UKJ3 1502 aaKnown RBP23.33■■□□□ 1.33
CCT4-204ENST00000544079 SEC24BO95487 1268 aa23.33■■□□□ 1.33
CCT4-204ENST00000544079 KDM2AQ9Y2K7 1162 aa23.33■■□□□ 1.33
CCT4-204ENST00000544079 WDR43Q15061 677 aaKnown RBP eCLIP23.32■■□□□ 1.32
CCT4-204ENST00000544079 PANK3Q9H999 370 aa23.32■■□□□ 1.32
CCT4-204ENST00000544079 CFDP1Q9UEE9 299 aaPredicted RBP23.32■■□□□ 1.32
CCT4-204ENST00000544079 ERBINQ96RT1 1412 aa23.32■■□□□ 1.32
CCT4-204ENST00000544079 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
CCT4-204ENST00000544079 PLXNC1O60486 1568 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms