RNA–Protein interactions for RNA: ENST00000543631.5

SPARCL1-210, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-210ENST00000543631 HMGXB3Q12766 1538 aa8.54□□□□□ -1.04
SPARCL1-210ENST00000543631 NCAPD3P42695 1498 aa8.52□□□□□ -1.05
SPARCL1-210ENST00000543631 PTPREP23469 700 aa8.52□□□□□ -1.05
SPARCL1-210ENST00000543631 KCNH8Q96L42 1107 aa8.52□□□□□ -1.05
SPARCL1-210ENST00000543631 GTPBP6O43824 516 aaPredicted RBP8.51□□□□□ -1.05
SPARCL1-210ENST00000543631 EVI5O60447 810 aa8.51□□□□□ -1.05
SPARCL1-210ENST00000543631 MFSD10Q14728 455 aa8.5□□□□□ -1.05
SPARCL1-210ENST00000543631 ZDHHC16Q969W1 377 aa8.5□□□□□ -1.05
SPARCL1-210ENST00000543631 STAC3Q96MF2 364 aa8.5□□□□□ -1.05
SPARCL1-210ENST00000543631 EMILIN3Q9NT22 766 aa8.5□□□□□ -1.05
SPARCL1-210ENST00000543631 A0A0G2JS52 829 aa8.49□□□□□ -1.05
SPARCL1-210ENST00000543631 RGS20O76081 388 aa8.48□□□□□ -1.05
SPARCL1-210ENST00000543631 PDE4AP27815 886 aa8.48□□□□□ -1.05
SPARCL1-210ENST00000543631 WNT2BQ93097 391 aa8.48□□□□□ -1.05
SPARCL1-210ENST00000543631 CCDC88BA6NC98 1476 aa8.48□□□□□ -1.05
SPARCL1-210ENST00000543631 RYDENQ9NUL5 291 aaKnown RBP8.47□□□□□ -1.05
SPARCL1-210ENST00000543631 COL9A1P20849 921 aa8.46□□□□□ -1.06
SPARCL1-210ENST00000543631 MRPL50Q8N5N7 158 aaKnown RBP8.46□□□□□ -1.06
SPARCL1-210ENST00000543631 PCDHGA10Q9Y5H3 936 aa8.46□□□□□ -1.06
SPARCL1-210ENST00000543631 PROX2Q3B8N5 592 aa8.45□□□□□ -1.06
SPARCL1-210ENST00000543631 DDX27Q96GQ7 796 aaKnown RBP8.45□□□□□ -1.06
SPARCL1-210ENST00000543631 LARP6Q9BRS8 491 aaKnown RBP8.45□□□□□ -1.06
SPARCL1-210ENST00000543631 PPP1R3GB7ZBB8 358 aa8.44□□□□□ -1.06
SPARCL1-210ENST00000543631 CADPS2Q86UW7 1296 aa8.43□□□□□ -1.06
SPARCL1-210ENST00000543631 NBPF3Q9H094 633 aa8.42□□□□□ -1.06
SPARCL1-210ENST00000543631 ITGBL1O95965 494 aaPredicted RBP8.41□□□□□ -1.06
SPARCL1-210ENST00000543631 RABGEF1Q9UJ41 708 aa8.41□□□□□ -1.06
SPARCL1-210ENST00000543631 GOLGA8CPA6NN73 597 aa8.4□□□□□ -1.06
SPARCL1-210ENST00000543631 MAP3K9P80192 1104 aa8.39□□□□□ -1.07
SPARCL1-210ENST00000543631 BCAMP50895 628 aa8.38□□□□□ -1.07
SPARCL1-210ENST00000543631 IRX2Q9BZI1 471 aaPredicted RBP8.38□□□□□ -1.07
SPARCL1-210ENST00000543631 PRDM2Q13029 1718 aa8.37□□□□□ -1.07
SPARCL1-210ENST00000543631 PHF14O94880 888 aa8.37□□□□□ -1.07
SPARCL1-210ENST00000543631 SOWAHBA6NEL2 793 aa8.36□□□□□ -1.07
SPARCL1-210ENST00000543631 CAMK2BQ13554 666 aa8.36□□□□□ -1.07
SPARCL1-210ENST00000543631 TYW1BQ6NUM6 668 aa8.36□□□□□ -1.07
SPARCL1-210ENST00000543631 LAPTM4BQ86VI4 370 aa8.35□□□□□ -1.07
SPARCL1-210ENST00000543631 FBXW7Q969H0 707 aa8.35□□□□□ -1.07
SPARCL1-210ENST00000543631 ANKK1Q8NFD2 765 aa8.34□□□□□ -1.07
SPARCL1-210ENST00000543631 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
SPARCL1-210ENST00000543631 ZFRQ96KR1 1074 aaKnown RBP8.33□□□□□ -1.08
SPARCL1-210ENST00000543631 WBP1LQ9NX94 342 aa8.33□□□□□ -1.08
SPARCL1-210ENST00000543631 CADPSQ9ULU8 1353 aa8.33□□□□□ -1.08
SPARCL1-210ENST00000543631 ONECUT3O60422 494 aaPredicted RBP8.32□□□□□ -1.08
SPARCL1-210ENST00000543631 C6orf132Q5T0Z8 1188 aa8.32□□□□□ -1.08
SPARCL1-210ENST00000543631 CFTRP13569 1480 aa8.32□□□□□ -1.08
SPARCL1-210ENST00000543631 LAMC3Q9Y6N6 1575 aa8.31□□□□□ -1.08
SPARCL1-210ENST00000543631 SEPT9Q9UHD8 586 aaPredicted RBP8.31□□□□□ -1.08
SPARCL1-210ENST00000543631 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
SPARCL1-210ENST00000543631 DPYSL4O14531 572 aa8.29□□□□□ -1.08
SPARCL1-210ENST00000543631 LCE2BO14633 110 aa8.29□□□□□ -1.08
SPARCL1-210ENST00000543631 ABCC8Q09428 1581 aa8.28□□□□□ -1.08
SPARCL1-210ENST00000543631 NYAP1Q6ZVC0 841 aa8.28□□□□□ -1.08
SPARCL1-210ENST00000543631 EPAS1Q99814 870 aa8.28□□□□□ -1.08
SPARCL1-210ENST00000543631 WRNQ14191 1432 aaPredicted RBP eCLIP8.28□□□□□ -1.08
SPARCL1-210ENST00000543631 PDS5BQ9NTI5 1447 aa8.27□□□□□ -1.09
SPARCL1-210ENST00000543631 FAM98CQ17RN3 349 aaKnown RBP8.26□□□□□ -1.09
SPARCL1-210ENST00000543631 TSKSQ9UJT2 592 aa8.25□□□□□ -1.09
SPARCL1-210ENST00000543631 FANCD2Q9BXW9 1451 aa8.25□□□□□ -1.09
SPARCL1-210ENST00000543631 KCNC4Q03721 635 aa8.24□□□□□ -1.09
SPARCL1-210ENST00000543631 TSR1Q2NL82 804 aaKnown RBP8.24□□□□□ -1.09
SPARCL1-210ENST00000543631 DDX12PQ92771 950 aa8.24□□□□□ -1.09
SPARCL1-210ENST00000543631 NESP48681 1621 aa8.23□□□□□ -1.09
SPARCL1-210ENST00000543631 C3orf80F5H4A9 247 aa8.23□□□□□ -1.09
SPARCL1-210ENST00000543631 PRIM1P49642 420 aaKnown RBP8.23□□□□□ -1.09
SPARCL1-210ENST00000543631 RBM33Q96EV2 1170 aaKnown RBP8.23□□□□□ -1.09
SPARCL1-210ENST00000543631 CEP164Q9UPV0 1460 aa8.23□□□□□ -1.09
SPARCL1-210ENST00000543631 EN1Q05925 392 aaPredicted RBP8.22□□□□□ -1.09
SPARCL1-210ENST00000543631 FAM198AQ9UFP1 575 aa8.22□□□□□ -1.09
SPARCL1-210ENST00000543631 TSR3Q9UJK0 312 aaKnown RBP8.22□□□□□ -1.09
SPARCL1-210ENST00000543631 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.21□□□□□ -1.1
SPARCL1-210ENST00000543631 HPS5Q9UPZ3 1129 aa8.21□□□□□ -1.1
SPARCL1-210ENST00000543631 TOP2BQ02880 1626 aa8.21□□□□□ -1.1
SPARCL1-210ENST00000543631 BIVM-ERCC5R4GMW8 1640 aa8.21□□□□□ -1.1
SPARCL1-210ENST00000543631 PDIA6Q15084 440 aa8.2□□□□□ -1.1
SPARCL1-210ENST00000543631 ERCC6Q03468 1493 aa8.19□□□□□ -1.1
SPARCL1-210ENST00000543631 SYNJ1O43426 1573 aa8.19□□□□□ -1.1
SPARCL1-210ENST00000543631 KIF21AQ7Z4S6 1674 aa8.19□□□□□ -1.1
SPARCL1-210ENST00000543631 TJAP1Q5JTD0 557 aa8.19□□□□□ -1.1
SPARCL1-210ENST00000543631 FAM9AQ8IZU1 332 aaPredicted RBP8.19□□□□□ -1.1
SPARCL1-210ENST00000543631 LRCH3Q96II8 777 aa8.19□□□□□ -1.1
SPARCL1-210ENST00000543631 Q6ZNB5 142 aa8.18□□□□□ -1.1
SPARCL1-210ENST00000543631 NBR1Q14596 966 aa8.17□□□□□ -1.1
SPARCL1-210ENST00000543631 EEA1Q15075 1411 aa8.17□□□□□ -1.1
SPARCL1-210ENST00000543631 DNMBPQ6XZF7 1577 aa8.17□□□□□ -1.1
SPARCL1-210ENST00000543631 CUX1P39880 1505 aa8.16□□□□□ -1.1
SPARCL1-210ENST00000543631 SMAPO00193 183 aa8.15□□□□□ -1.1
SPARCL1-210ENST00000543631 MAP3K7O43318 606 aa8.14□□□□□ -1.11
SPARCL1-210ENST00000543631 SAMD7Q7Z3H4 446 aa8.14□□□□□ -1.11
SPARCL1-210ENST00000543631 CDCA7LQ96GN5 454 aa8.14□□□□□ -1.11
SPARCL1-210ENST00000543631 TOPBP1Q92547 1522 aa8.13□□□□□ -1.11
SPARCL1-210ENST00000543631 PRSS12P56730 875 aa8.13□□□□□ -1.11
SPARCL1-210ENST00000543631 PACS2Q86VP3 889 aa8.13□□□□□ -1.11
SPARCL1-210ENST00000543631 MRC2Q9UBG0 1479 aa8.13□□□□□ -1.11
SPARCL1-210ENST00000543631 FGD5Q6ZNL6 1462 aa8.12□□□□□ -1.11
SPARCL1-210ENST00000543631 PPP4CP60510 307 aa8.11□□□□□ -1.11
SPARCL1-210ENST00000543631 MTRQ99707 1265 aa8.11□□□□□ -1.11
SPARCL1-210ENST00000543631 ARIH1Q9Y4X5 557 aaPredicted RBP8.11□□□□□ -1.11
SPARCL1-210ENST00000543631 KIF27Q86VH2 1401 aa8.11□□□□□ -1.11
SPARCL1-210ENST00000543631 LAPTM4AQ15012 233 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms