RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 HDAC5Q9UQL6 1122 aa12.44□□□□□ -0.42
TRERF1-205ENST00000541110 CCDC180Q9P1Z9 1646 aa12.43□□□□□ -0.42
TRERF1-205ENST00000541110 C1orf141Q5JVX7 400 aa12.43□□□□□ -0.42
TRERF1-205ENST00000541110 SYNE3Q6ZMZ3 975 aa12.43□□□□□ -0.42
TRERF1-205ENST00000541110 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRERF1-205ENST00000541110 CCNB3Q8WWL7 1395 aa12.43□□□□□ -0.42
TRERF1-205ENST00000541110 PPP4R2Q9NY27 417 aa12.43□□□□□ -0.42
TRERF1-205ENST00000541110 R3HCC1Q9Y3T6 440 aaKnown RBP12.43□□□□□ -0.42
TRERF1-205ENST00000541110 FAM184AQ8NB25 1140 aa12.42□□□□□ -0.42
TRERF1-205ENST00000541110 TMEM132AQ24JP5 1023 aa12.42□□□□□ -0.42
TRERF1-205ENST00000541110 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRERF1-205ENST00000541110 APPP05067 770 aa12.42□□□□□ -0.42
TRERF1-205ENST00000541110 MFAP1P55081 439 aaKnown RBP12.42□□□□□ -0.42
TRERF1-205ENST00000541110 RRP12Q5JTH9 1297 aaKnown RBP12.41□□□□□ -0.42
TRERF1-205ENST00000541110 WWC2Q6AWC2 1192 aa12.41□□□□□ -0.42
TRERF1-205ENST00000541110 CCDC70Q6NSX1 233 aa12.41□□□□□ -0.42
TRERF1-205ENST00000541110 HMMRO75330 724 aa12.41□□□□□ -0.42
TRERF1-205ENST00000541110 TPM1P09493 284 aa12.41□□□□□ -0.42
TRERF1-205ENST00000541110 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
TRERF1-205ENST00000541110 CT47A1Q5JQC4 288 aaPredicted RBP12.4□□□□□ -0.42
TRERF1-205ENST00000541110 SMC4Q9NTJ3 1288 aa12.4□□□□□ -0.42
TRERF1-205ENST00000541110 MCTP1Q6DN14 999 aa12.4□□□□□ -0.42
TRERF1-205ENST00000541110 KIF3AQ9Y496 699 aa12.4□□□□□ -0.42
TRERF1-205ENST00000541110 RILPL2Q969X0 211 aa12.4□□□□□ -0.43
TRERF1-205ENST00000541110 ZFYVE27Q5T4F4 411 aa12.39□□□□□ -0.43
TRERF1-205ENST00000541110 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
TRERF1-205ENST00000541110 SLKQ9H2G2 1235 aaPredicted RBP12.39□□□□□ -0.43
TRERF1-205ENST00000541110 RWDD1Q9H446 243 aaPredicted RBP12.38□□□□□ -0.43
TRERF1-205ENST00000541110 PHF14O94880 888 aa12.38□□□□□ -0.43
TRERF1-205ENST00000541110 TRIM29Q14134 588 aa12.38□□□□□ -0.43
TRERF1-205ENST00000541110 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.37□□□□□ -0.43
TRERF1-205ENST00000541110 FOXD4L6Q3SYB3 417 aaPredicted RBP12.37□□□□□ -0.43
TRERF1-205ENST00000541110 FOXD4L3Q6VB84 417 aaPredicted RBP12.37□□□□□ -0.43
TRERF1-205ENST00000541110 KAT6BQ8WYB5 2073 aa12.37□□□□□ -0.43
TRERF1-205ENST00000541110 FYB1O15117 783 aa12.37□□□□□ -0.43
TRERF1-205ENST00000541110 SLC4A3P48751 1232 aa12.37□□□□□ -0.43
TRERF1-205ENST00000541110 ROCK2O75116 1388 aaKnown RBP12.36□□□□□ -0.43
TRERF1-205ENST00000541110 GOLGA6L19H0YKK7 550 aa12.36□□□□□ -0.43
TRERF1-205ENST00000541110 TTC5Q8N0Z6 440 aa12.36□□□□□ -0.43
TRERF1-205ENST00000541110 IKQ13123 557 aaPredicted RBP12.36□□□□□ -0.43
TRERF1-205ENST00000541110 CCDC47Q96A33 483 aaKnown RBP12.36□□□□□ -0.43
TRERF1-205ENST00000541110 NAP1L1P55209 391 aaKnown RBP12.35□□□□□ -0.43
TRERF1-205ENST00000541110 SIN3AQ96ST3 1273 aa12.35□□□□□ -0.43
TRERF1-205ENST00000541110 KTN1Q86UP2 1357 aaKnown RBP12.35□□□□□ -0.43
TRERF1-205ENST00000541110 PPM1FP49593 454 aaPredicted RBP12.35□□□□□ -0.43
TRERF1-205ENST00000541110 SF3B2Q13435 895 aaKnown RBP12.35□□□□□ -0.43
TRERF1-205ENST00000541110 EPS15P42566 896 aa12.34□□□□□ -0.43
TRERF1-205ENST00000541110 CALRP27797 417 aaKnown RBP12.34□□□□□ -0.43
TRERF1-205ENST00000541110 TERF2IPQ9NYB0 399 aa12.34□□□□□ -0.43
TRERF1-205ENST00000541110 MTMR7Q9Y216 660 aa12.33□□□□□ -0.44
TRERF1-205ENST00000541110 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
TRERF1-205ENST00000541110 NFXL1Q6ZNB6 911 aa12.33□□□□□ -0.44
TRERF1-205ENST00000541110 HSP90AB2PQ58FF8 381 aa12.33□□□□□ -0.44
TRERF1-205ENST00000541110 PMFBP1Q8TBY8 1022 aa12.33□□□□□ -0.44
TRERF1-205ENST00000541110 ERICH2A1L162 156 aa12.33□□□□□ -0.44
TRERF1-205ENST00000541110 CCDC146Q8IYE0 955 aa12.32□□□□□ -0.44
TRERF1-205ENST00000541110 ST18O60284 1047 aa12.32□□□□□ -0.44
TRERF1-205ENST00000541110 CCDC27Q2M243 656 aa12.32□□□□□ -0.44
TRERF1-205ENST00000541110 EIF2S2P20042 333 aaKnown RBP12.31□□□□□ -0.44
TRERF1-205ENST00000541110 IPO7O95373 1038 aaKnown RBP12.31□□□□□ -0.44
TRERF1-205ENST00000541110 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
TRERF1-205ENST00000541110 EIF3AQ14152 1382 aaKnown RBP12.31□□□□□ -0.44
TRERF1-205ENST00000541110 ANKRD20A12PQ8NF67 263 aa12.31□□□□□ -0.44
TRERF1-205ENST00000541110 BECN2A8MW95 431 aa12.3□□□□□ -0.44
TRERF1-205ENST00000541110 LMOD3Q0VAK6 560 aa12.3□□□□□ -0.44
TRERF1-205ENST00000541110 NEXNQ0ZGT2 675 aa12.3□□□□□ -0.44
TRERF1-205ENST00000541110 C9orf78Q9NZ63 289 aaPredicted RBP12.3□□□□□ -0.44
TRERF1-205ENST00000541110 PSME1Q06323 249 aa12.3□□□□□ -0.44
TRERF1-205ENST00000541110 GOLGA3Q08378 1498 aa12.29□□□□□ -0.44
TRERF1-205ENST00000541110 ZNF592Q92610 1267 aa12.29□□□□□ -0.44
TRERF1-205ENST00000541110 CLUAP1Q96AJ1 413 aa12.29□□□□□ -0.44
TRERF1-205ENST00000541110 FOSBP53539 338 aa12.29□□□□□ -0.44
TRERF1-205ENST00000541110 CCDC97Q96F63 343 aaPredicted RBP12.29□□□□□ -0.44
TRERF1-205ENST00000541110 TCERG1O14776 1098 aaKnown RBP12.29□□□□□ -0.44
TRERF1-205ENST00000541110 FOXD1Q16676 465 aa12.29□□□□□ -0.44
TRERF1-205ENST00000541110 WASHC2CQ9Y4E1 1318 aa12.29□□□□□ -0.44
TRERF1-205ENST00000541110 TEFQ10587 303 aa12.28□□□□□ -0.44
TRERF1-205ENST00000541110 IBSPP21815 317 aaPredicted RBP12.28□□□□□ -0.44
TRERF1-205ENST00000541110 CPLX2Q6PUV4 134 aaKnown RBP12.28□□□□□ -0.44
TRERF1-205ENST00000541110 TRDNQ13061 729 aa12.28□□□□□ -0.44
TRERF1-205ENST00000541110 HOOK1Q9UJC3 728 aaKnown RBP12.28□□□□□ -0.44
TRERF1-205ENST00000541110 GPS2Q13227 327 aa12.28□□□□□ -0.44
TRERF1-205ENST00000541110 RB1CC1Q8TDY2 1594 aa12.27□□□□□ -0.44
TRERF1-205ENST00000541110 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.45
TRERF1-205ENST00000541110 PLIN1O60240 522 aa12.26□□□□□ -0.45
TRERF1-205ENST00000541110 KIF27Q86VH2 1401 aa12.26□□□□□ -0.45
TRERF1-205ENST00000541110 CPLX1O14810 134 aa12.26□□□□□ -0.45
TRERF1-205ENST00000541110 GOLGA6L3A6NEY3 463 aa12.26□□□□□ -0.45
TRERF1-205ENST00000541110 KIF3BO15066 747 aa12.25□□□□□ -0.45
TRERF1-205ENST00000541110 CHMP4CQ96CF2 233 aa12.25□□□□□ -0.45
TRERF1-205ENST00000541110 DIAPH3Q9NSV4 1193 aa12.25□□□□□ -0.45
TRERF1-205ENST00000541110 RUFY1Q96T51 708 aa12.25□□□□□ -0.45
TRERF1-205ENST00000541110 RCAN3Q9UKA8 241 aa12.25□□□□□ -0.45
TRERF1-205ENST00000541110 KDM4AO75164 1064 aa12.24□□□□□ -0.45
TRERF1-205ENST00000541110 WDR70Q9NW82 654 aa12.24□□□□□ -0.45
TRERF1-205ENST00000541110 ANO2Q9NQ90 1003 aa12.24□□□□□ -0.45
TRERF1-205ENST00000541110 PKD2Q13563 968 aa12.24□□□□□ -0.45
TRERF1-205ENST00000541110 DEKP35659 375 aaKnown RBP12.23□□□□□ -0.45
TRERF1-205ENST00000541110 SKIDA1Q1XH10 827 aa12.23□□□□□ -0.45
TRERF1-205ENST00000541110 ELL2O00472 640 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms